DatasetMEP.MEP.mega_Pheno.cls
#Group2_versus_Group4.MEP.mega_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_KRAS_SIGNALING_DN
Enrichment Score (ES)0.2924562
Normalized Enrichment Score (NES)1.1895652
Nominal p-value0.12871288
FDR q-value0.9802313
FWER p-Value0.885
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_KRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Skil270.9640.0325Yes
2Prodh660.8720.0611Yes
3Zfp112940.8170.0884Yes
4Camk1d960.8150.1169Yes
5Dcc3140.6580.1287Yes
6Pde6b3400.6490.1502Yes
7Gtf3c56330.5620.1547Yes
8Abcg48500.5180.1617Yes
9Tgfb210990.4780.1656Yes
10Cyp39a112470.4610.1741Yes
11Tg16980.4100.1651Yes
12Itgb1bp218160.3980.1730Yes
13Tnni318780.3930.1836Yes
14Hsd11b219350.3870.1943Yes
15Stag319910.3800.2047Yes
16Gpr1920310.3770.2159Yes
17Clstn320740.3730.2269Yes
18Atp4a20910.3710.2390Yes
19Tent5c20950.3700.2519Yes
20Tfcp2l121730.3630.2606Yes
21Slc12a323110.3500.2658Yes
22Nr6a124110.3440.2727Yes
23Efhd124710.3420.2817Yes
24Ngb25340.3370.2903Yes
25Cpeb327230.3230.2918Yes
26Synpo30050.3030.2878Yes
27Tgm132820.2850.2835Yes
28Zc2hc1c34040.2760.2869Yes
29Msh535320.2690.2897Yes
30Macroh2a237780.2540.2859Yes
31Arpp2138220.2510.2925Yes
32Sgk140850.2380.2872No
33Kcnn142000.2310.2893No
34Sidt147690.1990.2668No
35Btg250690.1840.2576No
36P2rx652070.1770.2567No
37Cpa252610.1760.2601No
38Fggy54680.1660.2552No
39Cd8060150.1420.2318No
40Bmpr1b61770.1330.2281No
41Plag162570.1290.2285No
42Cdkal163780.1240.2266No
43Ryr165770.1140.2203No
44Bard166050.1120.2229No
45Thnsl272200.0850.1939No
46Ypel173140.0810.1919No
47Nrip273200.0810.1944No
48Asb777100.0640.1764No
49Ryr284400.0320.1396No
50Egf84900.0290.1381No
51Celsr285250.0280.1373No
52Htr1b86240.0230.1330No
53Epha586420.0220.1328No
54Slc16a786970.0200.1307No
55Prkn88680.0140.1224No
56Vps5088870.0140.1219No
57Nos190320.0080.1147No
58Lgals792430.0000.1038No
59Tcf7l19318-0.0010.0999No
60Nr4a29784-0.0210.0765No
61Htr1d10112-0.0340.0607No
62Mx210238-0.0400.0556No
63Slc6a310431-0.0480.0473No
64Coq8a10611-0.0550.0399No
65Entpd710739-0.0600.0353No
66Capn911370-0.0850.0055No
67Mefv11496-0.0900.0022No
68Lfng11686-0.096-0.0043No
69Slc29a312154-0.117-0.0245No
70Thrb12427-0.128-0.0342No
71Brdt12924-0.152-0.0547No
72Dtnb13141-0.161-0.0603No
73Ptprj13211-0.164-0.0581No
74Selenop13488-0.177-0.0663No
75Kmt2d13602-0.182-0.0658No
76Serpinb213751-0.190-0.0668No
77Ybx214012-0.202-0.0733No
78Sphk214446-0.220-0.0881No
79Sptbn214584-0.228-0.0872No
80Gp1ba14619-0.230-0.0809No
81Kcnd115468-0.276-0.1154No
82Zbtb1615613-0.285-0.1129No
83Tex1515975-0.305-0.1210No
84Rsad216294-0.326-0.1261No
85Snn16358-0.330-0.1177No
86Idua16451-0.337-0.1107No
87Myo15a16539-0.344-0.1031No
88Col2a116553-0.345-0.0917No
89Mthfr16930-0.372-0.0982No
90Grid217121-0.387-0.0945No
91Fgfr317226-0.396-0.0860No
92Copz217302-0.400-0.0759No
93Mast317726-0.441-0.0824No
94Edar17885-0.459-0.0745No
95Mfsd617918-0.463-0.0599No
96Tenm218409-0.534-0.0667No
97Pdk218434-0.539-0.0490No
98Gamt18623-0.575-0.0386No
99Klk818732-0.604-0.0230No
100Slc25a2318802-0.623-0.0047No
101Ccdc10619211-0.8820.0050No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_KRAS_SIGNALING_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_KRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for HALLMARK_KRAS_SIGNALING_DN