DatasetMEP.MEP.mega_Pheno.cls
#Group2_versus_Group4.MEP.mega_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.2747095
Normalized Enrichment Score (NES)-1.0357647
Nominal p-value0.45109782
FDR q-value0.92201173
FWER p-Value0.974
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Sspn6430.559-0.0193No
2Vcam111020.478-0.0311No
3Cfb12180.465-0.0252No
4Cd6912240.465-0.0136No
5Trim2612600.459-0.0037No
6Il4ra14510.435-0.0025No
7Il10ra15390.4230.0037No
8Fcgr115910.4200.0118No
9Casp416850.4120.0174No
10Ncoa317160.4090.0263No
11Rnf3117400.4060.0355No
12Pim118360.3960.0406No
13Marchf119470.3860.0447No
14Ube2l620840.3720.0471No
15Stat320900.3710.0563No
16Myd8822690.3540.0560No
17Nod127310.3220.0402No
18Gbp328290.3130.0431No
19Selp29330.3070.0456No
20Mvp29920.3030.0503No
21Pnpt131160.2960.0514No
22Parp1432010.2910.0544No
23Il632650.2860.0584No
24Lats236380.2620.0457No
25Ogfr38880.2470.0390No
26Fgl240480.2410.0368No
27Nampt42220.2300.0336No
28Trim2142330.2290.0390No
29Lysmd243550.2220.0383No
30Psmb1048460.1950.0177No
31Cmtr151660.1780.0056No
32Epsti152190.1760.0073No
33Lap354000.1700.0023No
34Tnfaip354720.1660.0028No
35Upp157180.157-0.0060No
36Casp857840.154-0.0055No
37Znfx159620.145-0.0110No
38Ifit260370.140-0.0113No
39Socs362300.131-0.0180No
40Nup9362540.130-0.0159No
41Adar62780.129-0.0138No
42Jak264990.118-0.0223No
43Hif1a66100.112-0.0252No
44Stat467210.107-0.0282No
45Tor1b68170.103-0.0305No
46Tapbp70220.093-0.0388No
47Irf971210.089-0.0417No
48Ripk172770.083-0.0477No
49Rnf21374120.076-0.0527No
50Rapgef674500.074-0.0528No
51Irf175850.069-0.0580No
52Psmb978020.060-0.0678No
53Tdrd781070.048-0.0825No
54Ptpn181090.048-0.0813No
55Bst281400.046-0.0817No
56Dhx5882010.044-0.0837No
57Arid5b82090.043-0.0830No
58Ptpn285240.028-0.0987No
59P2ry1485700.026-0.1004No
60Cmklr185810.025-0.1002No
61Psme287090.019-0.1064No
62Il15ra88200.015-0.1117No
63Ifih190070.009-0.1212No
64Isoc191230.004-0.1271No
65Trim1492130.000-0.1318No
66Cd2749502-0.009-0.1466No
67Rtp49542-0.011-0.1484No
68Auts29651-0.015-0.1536No
69Cdkn1a9757-0.020-0.1586No
70Rigi9761-0.020-0.1582No
71Stat29801-0.021-0.1597No
72Cd409950-0.028-0.1667No
73Gpr1810095-0.033-0.1734No
74Helz210130-0.035-0.1743No
75Trim2510232-0.040-0.1786No
76Mx210238-0.040-0.1778No
77Nfkbia10309-0.043-0.1803No
78Wars110332-0.044-0.1804No
79Ripk210384-0.046-0.1818No
80Samd9l10486-0.050-0.1858No
81Eif2ak210529-0.052-0.1867No
82Stat110690-0.058-0.1936No
83Plscr110725-0.059-0.1939No
84Irf710805-0.062-0.1964No
85Sri10875-0.064-0.1984No
86Pfkp10981-0.069-0.2021No
87Zbp111029-0.071-0.2027No
88Samhd111110-0.074-0.2050No
89Casp111221-0.079-0.2088No
90St8sia411549-0.090-0.2236No
91Parp1211695-0.097-0.2287No
92Itgb711807-0.102-0.2319No
93Il18bp11854-0.104-0.2316No
94Btg111874-0.105-0.2299No
95Nfkb111979-0.109-0.2325No
96Herc612147-0.116-0.2383No
97Slc25a2812168-0.117-0.2364No
98Gch112225-0.119-0.2362No
99Cmpk212434-0.128-0.2438No
100Ciita12436-0.128-0.2406No
101Oas212462-0.130-0.2386No
102Socs112569-0.135-0.2407No
103Cd7412899-0.150-0.2541No
104Txnip12963-0.154-0.2534No
105Mthfd213153-0.161-0.2592No
106Trafd113318-0.169-0.2634No
107Irf213362-0.171-0.2613No
108Bpgm13578-0.181-0.2679No
109Peli113579-0.181-0.2633No
110Lcp213640-0.184-0.2618No
111Icam113653-0.185-0.2577No
112Pde4b13696-0.187-0.2551No
113Pml13773-0.191-0.2542No
114Pla2g4a13894-0.196-0.2555No
115Rbck114062-0.204-0.2590No
116Isg2014364-0.217-0.2692Yes
117Il714369-0.217-0.2638Yes
118Casp314547-0.226-0.2673Yes
119H2-Aa14653-0.231-0.2669Yes
120Usp1814696-0.233-0.2631Yes
121Sp11014697-0.233-0.2572Yes
122Sppl2a14792-0.239-0.2560Yes
123Psmb214922-0.246-0.2565Yes
124Ddx6015001-0.251-0.2541Yes
125Arl4a15185-0.260-0.2571Yes
126Tnfsf1015497-0.278-0.2662Yes
127Vamp815540-0.280-0.2613Yes
128Ptpn615661-0.286-0.2602Yes
129St3gal515709-0.289-0.2553Yes
130Nlrc515721-0.289-0.2485Yes
131Cxcl1015733-0.290-0.2417Yes
132Casp715934-0.303-0.2444Yes
133Tnfaip215945-0.303-0.2372Yes
134Irf516041-0.310-0.2343Yes
135Cd3816145-0.316-0.2316Yes
136Psma216146-0.316-0.2235Yes
137Xaf116209-0.321-0.2186Yes
138Irf816221-0.322-0.2109Yes
139Rsad216294-0.326-0.2063Yes
140Psmb816390-0.332-0.2028Yes
141Psma316399-0.332-0.1948Yes
142Nmi16604-0.349-0.1965Yes
143Ifit316740-0.357-0.1945Yes
144Oas316970-0.375-0.1969Yes
145Vamp517013-0.378-0.1894Yes
146Ifi2717058-0.382-0.1820Yes
147Tap117367-0.406-0.1877Yes
148Ifi3017409-0.410-0.1794Yes
149Ifi4417439-0.412-0.1704Yes
150Ccl517492-0.416-0.1624Yes
151Fas17610-0.428-0.1576Yes
152Ifnar217625-0.430-0.1474Yes
153Bank117634-0.431-0.1368Yes
154Ifitm217644-0.432-0.1263Yes
155Oasl117685-0.438-0.1172Yes
156Cd8617754-0.444-0.1094Yes
157Sod217786-0.449-0.0996Yes
158H2-DMa18064-0.482-0.1017Yes
159Ly6e18153-0.494-0.0937Yes
160Il1518205-0.502-0.0836Yes
161Pnp18312-0.520-0.0758Yes
162B2m18351-0.525-0.0644Yes
163Isg1518457-0.543-0.0561Yes
164Ifi3518564-0.562-0.0473Yes
165Psme118858-0.642-0.0462Yes
166Ifitm318864-0.644-0.0300Yes
167Eif4e318967-0.683-0.0179Yes
168Lgals3bp18988-0.697-0.0012Yes
169Batf218989-0.6980.0166Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE