DatasetMEP.MEP.mega_Pheno.cls
#Group2_versus_Group4.MEP.mega_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.24600887
Normalized Enrichment Score (NES)0.8393113
Nominal p-value0.61054766
FDR q-value0.9035008
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Zw101140.7940.0121Yes
2Srsf12090.7140.0234Yes
3Ncapd24560.6030.0242Yes
4Lmnb14780.5980.0367Yes
5Ipo75020.5920.0489Yes
6Xpo15390.5820.0602Yes
7Bub1b8910.5120.0535Yes
8Aurka9720.4980.0606Yes
9Plk19940.4940.0707Yes
10Slbp10550.4850.0786Yes
11Wdr9010560.4840.0896Yes
12Dlgap512110.4670.0921Yes
13Kif2c12170.4650.1024Yes
14Brca112350.4630.1121Yes
15Rad2112730.4570.1205Yes
16Cdkn2c13270.4500.1280Yes
17Nup10715010.4290.1287Yes
18Hnrnpd16380.4160.1310Yes
19Ppp1r817200.4080.1360Yes
20Dnmt117520.4050.1436Yes
21Cdk117920.4000.1506Yes
22Depdc1a18240.3970.1580Yes
23Racgap119200.3890.1619Yes
24Hmmr19280.3880.1703Yes
25Cdc25b20060.3790.1749Yes
26Smc320920.3700.1788Yes
27Tfrc22640.3540.1780Yes
28Ccp11025430.3370.1710Yes
29Espl125580.3350.1779Yes
30Cse1l25650.3350.1852Yes
31Cenpe28520.3120.1773Yes
32Ak229690.3040.1782Yes
33Nop5631920.2910.1732Yes
34Ubr731990.2910.1794Yes
35Tacc332550.2870.1831Yes
36Top2a32600.2870.1894Yes
37Pcna32970.2840.1940Yes
38Donson33560.2800.1973Yes
39Msh233640.2800.2033Yes
40Spag534480.2740.2052Yes
41Ssrp134820.2720.2096Yes
42Mcm634860.2710.2156Yes
43Lsm835490.2680.2185Yes
44Cdca836460.2620.2194Yes
45Exosc836720.2610.2240Yes
46Dck38020.2520.2230Yes
47Nap1l138440.2490.2265Yes
48Xrcc640980.2380.2186Yes
49Kif441990.2310.2186Yes
50Lbr42670.2280.2203Yes
51Kif2242780.2270.2249Yes
52Aurkb43100.2250.2284Yes
53Gins343520.2220.2313Yes
54Atad243600.2210.2360Yes
55Ilf344630.2160.2355Yes
56Nup20545540.2120.2356Yes
57Rpa146650.2050.2345Yes
58Prps148100.1960.2315Yes
59Syncrip48320.1950.2348Yes
60Phf5a48610.1940.2377Yes
61Spc2549130.1920.2394Yes
62Suv39h149200.1910.2434Yes
63Mcm449540.1890.2460Yes
64Smc1a52960.1760.2322No
65Tmpo54080.1690.2302No
66Rbbp758800.1490.2089No
67Melk59220.1470.2101No
68Brms1l59250.1470.2134No
69Mki6759720.1440.2142No
70Prkdc59740.1440.2174No
71Chek260020.1420.2193No
72E2f860170.1410.2217No
73Pnn61760.1330.2165No
74Birc562800.1290.2140No
75Cdc25a63210.1270.2148No
76Pole64610.1200.2103No
77Kif18b64650.1190.2128No
78Chek164690.1190.2154No
79Plk465170.1170.2156No
80Bard166050.1120.2136No
81Mms22l66160.1120.2156No
82Ddx39a67190.1070.2127No
83Prim267460.1060.2137No
84Mcm268200.1030.2122No
85Trip1369090.0980.2099No
86Cit69870.0950.2080No
87Tra2b69930.0940.2099No
88Psmc3ip70690.0910.2080No
89Nasp70970.0900.2086No
90Lyar71290.0880.2090No
91Nbn72420.0830.2050No
92Cbx573060.0820.2036No
93Cdkn1b74150.0760.1997No
94Ube2t77800.0600.1820No
95Diaph378380.0590.1804No
96Mre11a78480.0580.1812No
97Pds5b81540.0450.1663No
98Tbrg483140.0380.1588No
99Timeless84320.0320.1534No
100Wee185380.0270.1486No
101Mybl286150.0230.1451No
102Paics86910.0200.1416No
103Anp32e87200.0190.1406No
104Ccnb287290.0190.1406No
105Shmt187880.0160.1380No
106Tubb588640.0140.1344No
107Pan288840.0140.1337No
108Cenpm89150.0130.1324No
109Pold389700.0100.1298No
110Ccne189950.0090.1287No
111Orc291300.0040.1218No
112Tcf1991870.0010.1189No
113Mcm39355-0.0020.1102No
114Luc7l39574-0.0120.0991No
115Cdkn1a9757-0.0200.0900No
116Smc49774-0.0200.0896No
117Cdkn2a9948-0.0280.0812No
118Cdc2010115-0.0340.0733No
119Pa2g410205-0.0390.0696No
120Hus110208-0.0390.0703No
121Nup15310214-0.0390.0710No
122Ube2s10403-0.0470.0622No
123Ezh210482-0.0500.0592No
124Mlh110628-0.0560.0529No
125Lig110635-0.0560.0539No
126Mcm510802-0.0610.0466No
127Rrm210853-0.0630.0454No
128Brca210909-0.0660.0440No
129Nudt2111054-0.0720.0381No
130Asf1b11072-0.0730.0389No
131Jpt111075-0.0730.0404No
132Stmn111077-0.0730.0420No
133Rad51c11144-0.0760.0403No
134Stag111183-0.0770.0401No
135Cks1b11202-0.0780.0409No
136Eed11379-0.0850.0336No
137Tubg111511-0.0900.0288No
138Dut11553-0.0900.0287No
139Rad5011590-0.0920.0289No
140Eif2s111592-0.0920.0310No
141Hmgb211895-0.1060.0176No
142Hmgb311902-0.1060.0197No
143Cks211980-0.1090.0181No
144Ran12264-0.1210.0061No
145Rad112352-0.1250.0043No
146Srsf212437-0.1280.0029No
147Rfc112493-0.1320.0030No
148Psip112507-0.1320.0053No
149Pold112671-0.139-0.0001No
150Nolc112691-0.1400.0021No
151Tipin12783-0.1450.0007No
152Usp112800-0.1460.0031No
153Gspt112855-0.1480.0037No
154Mthfd213153-0.161-0.0082No
155Rpa213154-0.161-0.0045No
156Mcm713371-0.171-0.0120No
157Ctcf13426-0.174-0.0108No
158Trp5313548-0.179-0.0131No
159Mxd313687-0.186-0.0161No
160Orc613793-0.191-0.0172No
161Pms213846-0.194-0.0156No
162Hells13853-0.194-0.0115No
163Gins413963-0.199-0.0126No
164Ung14298-0.214-0.0253No
165H2az114508-0.223-0.0311No
166Pttg114537-0.225-0.0275No
167Asf1a14635-0.230-0.0273No
168Dek14698-0.233-0.0253No
169Cnot914873-0.243-0.0289No
170Snrpb15011-0.251-0.0303No
171Hmga1b15030-0.253-0.0255No
172Myc15146-0.258-0.0257No
173Mad2l115148-0.258-0.0199No
174Cdk415202-0.261-0.0167No
175Smc615220-0.262-0.0117No
176Spc2415230-0.262-0.0062No
177Cdkn315261-0.264-0.0018No
178Ranbp115361-0.270-0.0008No
179Dclre1b15501-0.278-0.0018No
180Nme115813-0.295-0.0113No
181H2ax15892-0.301-0.0086No
182Gins115967-0.305-0.0056No
183Tk116124-0.316-0.0065No
184Ppm1d16169-0.318-0.0016No
185Rpa316276-0.3250.0002No
186Ing316417-0.3340.0005No
187Rad51ap116498-0.3410.0040No
188Pola216600-0.3480.0066No
189Dctpp116611-0.3490.0140No
190Prdx417252-0.397-0.0104No
191Cdca317561-0.424-0.0169No
192Rfc218134-0.492-0.0357No
193Dscc118631-0.578-0.0485No
194Rnaseh2a18686-0.593-0.0379No
195Pop719000-0.703-0.0383No
196Rfc319024-0.716-0.0233No
197Pold219172-0.833-0.0120No
198Pole419178-0.8390.0068No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS