Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group2_versus_Group4.MEP.mega_Pheno.cls #Group2_versus_Group4_repos
Phenotype	MEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.29825416
Normalized Enrichment Score (NES)	-1.2373704
Nominal p-value	0.2173913
FDR q-value	0.60393643
FWER p-Value	0.835

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gmpr2	408	0.617	-0.0033	No
2	Gtf3c5	633	0.562	0.0014	No
3	Polh	1168	0.470	-0.0127	No
4	Polr3gl	1641	0.416	-0.0253	No
5	Adcy6	1892	0.392	-0.0269	No
6	Cda	1954	0.385	-0.0188	No
7	Tarbp2	2075	0.373	-0.0142	No
8	Ercc3	2460	0.343	-0.0242	No
9	Rnmt	2550	0.336	-0.0191	No
10	Nt5c3	2606	0.331	-0.0123	No
11	Tk2	2675	0.328	-0.0063	No
12	Cstf3	2689	0.327	0.0026	No
13	Polr2k	2770	0.320	0.0078	No
14	Xpc	2793	0.318	0.0159	No
15	Vps37b	2814	0.315	0.0240	No
16	Npr2	3189	0.292	0.0130	No
17	Taf1c	3251	0.287	0.0182	No
18	Pcna	3297	0.284	0.0241	No
19	Ercc5	3349	0.281	0.0297	No
20	Ssrp1	3482	0.272	0.0307	No
21	Ercc8	3599	0.265	0.0324	No
22	Snapc4	3602	0.264	0.0400	No
23	Srsf6	3894	0.246	0.0320	No
24	Adrm1	4628	0.208	-0.0002	No
25	Nudt9	4689	0.204	0.0026	No
26	Cox17	4997	0.187	-0.0080	No
27	Dgcr8	5297	0.176	-0.0184	No
28	Taf12	5382	0.171	-0.0178	No
29	Polr2d	5745	0.155	-0.0322	No
30	Polr1d	5981	0.143	-0.0403	No
31	Pde6g	6292	0.128	-0.0527	No
32	Gtf2h3	6459	0.120	-0.0579	No
33	Gtf2h1	6501	0.118	-0.0566	No
34	Zwint	6527	0.117	-0.0545	No
35	Usp11	6536	0.116	-0.0515	No
36	Polr3c	6578	0.114	-0.0503	No
37	Supt5	6604	0.112	-0.0483	No
38	Bcap31	6611	0.112	-0.0454	No
39	Nelfcd	6842	0.102	-0.0544	No
40	Pold4	6861	0.101	-0.0524	No
41	Sf3a3	7065	0.091	-0.0604	No
42	Mpg	7095	0.090	-0.0593	No
43	Smad5	7533	0.071	-0.0800	No
44	Aaas	8162	0.045	-0.1115	No
45	Nfx1	8894	0.013	-0.1492	No
46	Tyms	8902	0.013	-0.1492	No
47	Rev3l	8939	0.012	-0.1507	No
48	Sdcbp	8964	0.010	-0.1517	No
49	Pold3	8970	0.010	-0.1516	No
50	Ercc4	9114	0.005	-0.1590	No
51	Polr1c	9135	0.004	-0.1599	No
52	Dctn4	9155	0.003	-0.1608	No
53	Rad51	9344	-0.002	-0.1706	No
54	Taf9	9470	-0.008	-0.1769	No
55	Ak1	9551	-0.011	-0.1807	No
56	Eloa	9589	-0.012	-0.1823	No
57	Taf6	9647	-0.015	-0.1848	No
58	Fen1	9859	-0.024	-0.1952	No
59	Pola1	9921	-0.027	-0.1975	No
60	Gtf2f1	9927	-0.027	-0.1970	No
61	Dguok	9982	-0.029	-0.1990	No
62	Polr2j	10284	-0.042	-0.2134	No
63	Hcls1	10546	-0.052	-0.2255	No
64	Lig1	10635	-0.056	-0.2285	No
65	Ddb1	10644	-0.056	-0.2273	No
66	Rrm2b	10937	-0.067	-0.2406	No
67	Nudt21	11054	-0.072	-0.2445	No
68	Ercc1	11082	-0.073	-0.2438	No
69	Edf1	11157	-0.076	-0.2454	No
70	Rfc5	11193	-0.078	-0.2450	No
71	Dut	11553	-0.090	-0.2611	No
72	Rad52	11570	-0.091	-0.2593	No
73	Polr2a	11778	-0.101	-0.2671	No
74	Supt4a	11942	-0.108	-0.2725	No
75	Clp1	12064	-0.113	-0.2755	No
76	Upf3b	12096	-0.115	-0.2738	No
77	Surf1	12232	-0.120	-0.2773	No
78	Nelfe	12375	-0.126	-0.2811	No
79	Cmpk2	12434	-0.128	-0.2804	No
80	Ell	12575	-0.135	-0.2837	No
81	Pold1	12671	-0.139	-0.2846	No
82	Tsg101	12892	-0.150	-0.2917	No
83	Rfc4	12893	-0.150	-0.2873	No
84	Zfp707	13082	-0.158	-0.2925	No
85	Rpa2	13154	-0.161	-0.2915	No
86	Ncbp2	13201	-0.163	-0.2892	No
87	Gsdme	13252	-0.166	-0.2869	No
88	Cant1	13470	-0.176	-0.2931	Yes
89	Trp53	13548	-0.179	-0.2919	Yes
90	Mrpl40	13624	-0.183	-0.2905	Yes
91	Pde4b	13696	-0.187	-0.2887	Yes
92	Nme3	13699	-0.187	-0.2834	Yes
93	Umps	13830	-0.193	-0.2845	Yes
94	Gtf2h5	14000	-0.201	-0.2875	Yes
95	Ercc2	14168	-0.208	-0.2901	Yes
96	Gtf2a2	14237	-0.211	-0.2875	Yes
97	Polr2c	14320	-0.215	-0.2856	Yes
98	Cetn2	14346	-0.216	-0.2806	Yes
99	Alyref	14381	-0.217	-0.2760	Yes
100	Ago4	14500	-0.223	-0.2756	Yes
101	Polr2h	14636	-0.230	-0.2760	Yes
102	Sac3d1	14813	-0.240	-0.2781	Yes
103	Nelfb	15002	-0.251	-0.2806	Yes
104	Gpx4	15060	-0.254	-0.2762	Yes
105	Ak3	15080	-0.255	-0.2697	Yes
106	Itpa	15200	-0.261	-0.2683	Yes
107	Prim1	15255	-0.263	-0.2635	Yes
108	Impdh2	15266	-0.264	-0.2563	Yes
109	Arl6ip1	15337	-0.268	-0.2521	Yes
110	Polr2i	15398	-0.272	-0.2473	Yes
111	Polr2f	15529	-0.280	-0.2459	Yes
112	Nme1	15813	-0.295	-0.2521	Yes
113	Polr2e	15954	-0.304	-0.2505	Yes
114	Nt5c	16171	-0.318	-0.2525	Yes
115	Rala	16274	-0.325	-0.2483	Yes
116	Rpa3	16276	-0.325	-0.2389	Yes
117	Polr1h	16331	-0.329	-0.2321	Yes
118	Taf10	16413	-0.333	-0.2266	Yes
119	Snapc5	16429	-0.335	-0.2176	Yes
120	Rbx1	16493	-0.341	-0.2110	Yes
121	Polb	16595	-0.348	-0.2061	Yes
122	Pola2	16600	-0.348	-0.1961	Yes
123	Poll	16764	-0.359	-0.1942	Yes
124	Nme4	17117	-0.387	-0.2013	Yes
125	Rae1	17147	-0.389	-0.1914	Yes
126	Mpc2	17156	-0.389	-0.1805	Yes
127	Ddb2	17358	-0.405	-0.1792	Yes
128	Taf13	17609	-0.428	-0.1797	Yes
129	Sec61a1	17789	-0.449	-0.1760	Yes
130	Pom121	17937	-0.464	-0.1701	Yes
131	Brf2	17997	-0.472	-0.1594	Yes
132	Rfc2	18134	-0.492	-0.1521	Yes
133	Aprt	18155	-0.495	-0.1387	Yes
134	Dad1	18237	-0.508	-0.1282	Yes
135	Stx3	18269	-0.512	-0.1148	Yes
136	Pnp	18312	-0.520	-0.1019	Yes
137	Ada	18382	-0.530	-0.0900	Yes
138	Polr2g	18491	-0.549	-0.0796	Yes
139	Gtf2b	18582	-0.566	-0.0678	Yes
140	Eif1b	18613	-0.574	-0.0526	Yes
141	Guk1	18758	-0.611	-0.0423	Yes
142	Rfc3	19024	-0.716	-0.0353	Yes
143	Pole4	19178	-0.839	-0.0188	Yes
144	Vps28	19207	-0.873	0.0052	Yes