Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group2_versus_Group4.MEP.mega_Pheno.cls #Group2_versus_Group4_repos
Phenotype	MEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.2561611
Normalized Enrichment Score (NES)	-1.0284894
Nominal p-value	0.45596868
FDR q-value	0.8718021
FWER p-Value	0.976

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Pcsk9	803	0.525	-0.0278	No
2	Kynu	1148	0.473	-0.0331	No
3	Cfb	1218	0.465	-0.0242	No
4	Ctsh	1361	0.446	-0.0196	No
5	Cdk5r1	1368	0.445	-0.0080	No
6	Casp4	1685	0.412	-0.0134	No
7	Dusp6	1690	0.411	-0.0026	No
8	Gnai3	1820	0.398	0.0013	No
9	Pim1	1836	0.396	0.0112	No
10	Prep	1876	0.393	0.0197	No
11	Cda	1954	0.385	0.0261	No
12	Ctsc	2106	0.369	0.0281	No
13	Fn1	2366	0.347	0.0239	No
14	C1qc	2420	0.344	0.0304	No
15	Zfpm2	2590	0.333	0.0305	No
16	Dock9	2835	0.313	0.0262	No
17	Il6	3265	0.286	0.0114	No
18	Cr2	3367	0.279	0.0137	No
19	Notch4	3394	0.277	0.0198	No
20	Hspa1a	3670	0.261	0.0124	No
21	Hspa5	3676	0.260	0.0191	No
22	Ctss	3866	0.248	0.0159	No
23	Usp8	4346	0.222	-0.0031	No
24	Mmp14	4376	0.221	0.0013	No
25	Gmfb	4437	0.217	0.0040	No
26	Ctsb	4650	0.206	-0.0016	No
27	Maff	4840	0.195	-0.0062	No
28	Usp14	4863	0.193	-0.0021	No
29	Ppp4c	5041	0.185	-0.0064	No
30	Rasgrp1	5174	0.178	-0.0085	No
31	Pik3r5	5352	0.173	-0.0131	No
32	Lap3	5400	0.170	-0.0110	No
33	Tnfaip3	5472	0.166	-0.0103	No
34	Tmprss6	5577	0.161	-0.0114	No
35	Lgals3	5795	0.153	-0.0186	No
36	F10	5959	0.145	-0.0232	No
37	Vcpip1	5976	0.144	-0.0202	No
38	Usp15	5993	0.143	-0.0172	No
39	Phex	6008	0.142	-0.0141	No
40	Pik3ca	6072	0.138	-0.0137	No
41	Col4a2	6164	0.134	-0.0148	No
42	Cblb	6222	0.131	-0.0143	No
43	Rbsn	6236	0.131	-0.0115	No
44	Jak2	6499	0.118	-0.0220	No
45	Lipa	6667	0.110	-0.0278	No
46	Raf1	6690	0.109	-0.0260	No
47	Ctsd	6702	0.108	-0.0237	No
48	Psen1	6852	0.101	-0.0287	No
49	Lamp2	6882	0.100	-0.0276	No
50	Fyn	6920	0.098	-0.0269	No
51	Prss36	7105	0.089	-0.0341	No
52	Plek	7336	0.080	-0.0440	No
53	Irf1	7585	0.069	-0.0551	No
54	Anxa5	7643	0.066	-0.0563	No
55	Fdx1	7794	0.060	-0.0625	No
56	Psmb9	7802	0.060	-0.0612	No
57	F7	7808	0.060	-0.0599	No
58	Serpinc1	7879	0.056	-0.0620	No
59	Usp16	7963	0.053	-0.0649	No
60	Kif2a	8068	0.049	-0.0690	No
61	Stx4a	8319	0.038	-0.0811	No
62	Olr1	8332	0.037	-0.0807	No
63	Grb2	8411	0.033	-0.0839	No
64	Rnf4	8431	0.032	-0.0840	No
65	Lta4h	8677	0.020	-0.0963	No
66	Pclo	9009	0.009	-0.1133	No
67	Ltf	9229	0.000	-0.1248	No
68	Ppp2cb	9525	-0.010	-0.1399	No
69	Plaur	9698	-0.017	-0.1484	No
70	S100a13	9738	-0.019	-0.1499	No
71	Fcer1g	9779	-0.021	-0.1515	No
72	Lck	10314	-0.044	-0.1782	No
73	Prcp	10370	-0.045	-0.1798	No
74	Dyrk2	10619	-0.055	-0.1913	No
75	Plscr1	10725	-0.059	-0.1952	No
76	Lrp1	10749	-0.060	-0.1948	No
77	Spock2	10781	-0.060	-0.1948	No
78	Irf7	10805	-0.062	-0.1943	No
79	Itgam	10933	-0.066	-0.1992	No
80	Cd46	11048	-0.072	-0.2032	No
81	Cdh13	11050	-0.072	-0.2013	No
82	Calm3	11063	-0.073	-0.2000	No
83	Ehd1	11086	-0.073	-0.1992	No
84	Gca	11129	-0.075	-0.1993	No
85	Dgkh	11143	-0.076	-0.1980	No
86	Casp1	11221	-0.079	-0.1999	No
87	Was	11415	-0.087	-0.2076	No
88	Adam9	11626	-0.093	-0.2161	No
89	Cp	11641	-0.094	-0.2143	No
90	C2	11916	-0.107	-0.2257	No
91	Gnai2	11959	-0.109	-0.2250	No
92	Prkcd	12073	-0.113	-0.2279	No
93	Src	12173	-0.117	-0.2299	No
94	Clu	12188	-0.118	-0.2275	No
95	Akap10	12249	-0.120	-0.2274	No
96	Lyn	12310	-0.123	-0.2272	No
97	Pik3cg	12449	-0.129	-0.2309	No
98	Me1	12508	-0.132	-0.2304	No
99	Sirt6	12573	-0.135	-0.2301	No
100	Pdgfb	12606	-0.137	-0.2281	No
101	Msrb1	12634	-0.138	-0.2258	No
102	Gng2	12684	-0.140	-0.2246	No
103	F2	13106	-0.159	-0.2424	No
104	Irf2	13362	-0.171	-0.2511	No
105	F5	13367	-0.171	-0.2467	No
106	Hnf4a	13444	-0.175	-0.2460	No
107	Lcp2	13640	-0.184	-0.2512	Yes
108	Cpm	13643	-0.184	-0.2464	Yes
109	Gpd2	13729	-0.188	-0.2458	Yes
110	Serpinb2	13751	-0.190	-0.2418	Yes
111	Pla2g7	13796	-0.191	-0.2389	Yes
112	Pla2g4a	13894	-0.196	-0.2387	Yes
113	Cpq	14028	-0.202	-0.2402	Yes
114	Tfpi2	14086	-0.206	-0.2377	Yes
115	Plg	14096	-0.206	-0.2326	Yes
116	Kcnip2	14257	-0.212	-0.2353	Yes
117	Dgkg	14307	-0.214	-0.2321	Yes
118	L3mbtl4	14485	-0.222	-0.2354	Yes
119	Car2	14527	-0.224	-0.2315	Yes
120	Casp3	14547	-0.226	-0.2264	Yes
121	Zeb1	14582	-0.227	-0.2221	Yes
122	Gp1ba	14619	-0.230	-0.2178	Yes
123	Casp9	14834	-0.242	-0.2225	Yes
124	S100a9	14945	-0.247	-0.2216	Yes
125	Lgmn	14970	-0.249	-0.2162	Yes
126	Gzmb	15189	-0.260	-0.2206	Yes
127	Xpnpep1	15314	-0.267	-0.2199	Yes
128	Brpf3	15375	-0.271	-0.2157	Yes
129	C3	15391	-0.272	-0.2092	Yes
130	Casp7	15934	-0.303	-0.2294	Yes
131	Kcnip3	15952	-0.304	-0.2221	Yes
132	Gp9	16037	-0.309	-0.2182	Yes
133	Fcnb	16125	-0.316	-0.2142	Yes
134	Dpp4	16229	-0.322	-0.2110	Yes
135	Gzmk	16252	-0.324	-0.2034	Yes
136	Gnb2	16318	-0.328	-0.1980	Yes
137	Gata3	16517	-0.342	-0.1991	Yes
138	Dusp5	16626	-0.349	-0.1954	Yes
139	Ctsl	16639	-0.350	-0.1866	Yes
140	Rabif	16707	-0.355	-0.1806	Yes
141	Cebpb	17006	-0.378	-0.1860	Yes
142	Klkb1	17026	-0.380	-0.1768	Yes
143	Sh2b3	17052	-0.382	-0.1678	Yes
144	Pdp1	17118	-0.387	-0.1609	Yes
145	Calm1	17206	-0.393	-0.1548	Yes
146	Dock10	17392	-0.409	-0.1535	Yes
147	Ccl5	17492	-0.416	-0.1475	Yes
148	Dock4	17575	-0.426	-0.1404	Yes
149	Csrp1	17596	-0.427	-0.1299	Yes
150	Gnb4	17615	-0.429	-0.1194	Yes
151	Mmp15	17796	-0.450	-0.1167	Yes
152	Cd36	17852	-0.455	-0.1073	Yes
153	Prdm4	17919	-0.463	-0.0983	Yes
154	Pfn1	18225	-0.506	-0.1007	Yes
155	Rce1	18435	-0.539	-0.0971	Yes
156	Rhog	18556	-0.559	-0.0883	Yes
157	F8	18779	-0.617	-0.0833	Yes
158	Timp2	18782	-0.618	-0.0668	Yes
159	Ctso	18971	-0.684	-0.0583	Yes
160	Gngt2	19079	-0.749	-0.0437	Yes
161	Atox1	19235	-0.937	-0.0267	Yes
162	Actn2	19282	-1.131	0.0013	Yes