Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group2_versus_Group4.MEP.mega_Pheno.cls #Group2_versus_Group4_repos
Phenotype	MEP.mega_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	0.18433578
Normalized Enrichment Score (NES)	0.8424756
Nominal p-value	0.7565392
FDR q-value	0.95877093
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Mmp2	78	0.847	0.0200	Yes
2	Pmaip1	110	0.799	0.0411	Yes
3	Etf1	365	0.636	0.0459	Yes
4	Atf3	374	0.633	0.0634	Yes
5	Erbb3	827	0.520	0.0546	Yes
6	Il1b	942	0.505	0.0630	Yes
7	Aifm3	1040	0.487	0.0718	Yes
8	Tgfb2	1099	0.478	0.0824	Yes
9	Slc20a1	1167	0.470	0.0922	Yes
10	Cd69	1224	0.465	0.1025	Yes
11	Brca1	1235	0.463	0.1151	Yes
12	Jun	1406	0.441	0.1188	Yes
13	Sptan1	1531	0.425	0.1244	Yes
14	Gpx3	1550	0.422	0.1354	Yes
15	Timp3	1645	0.415	0.1423	Yes
16	Casp4	1685	0.412	0.1520	Yes
17	App	1804	0.399	0.1572	Yes
18	Cth	1805	0.399	0.1685	Yes
19	Rhob	1961	0.384	0.1713	Yes
20	Cdc25b	2006	0.379	0.1798	Yes
21	Mcl1	2148	0.366	0.1828	Yes
22	Ppp3r1	2812	0.315	0.1572	Yes
23	Tnfrsf12a	2844	0.312	0.1644	Yes
24	Mgmt	2885	0.311	0.1712	Yes
25	F2r	3185	0.292	0.1639	Yes
26	Cyld	3252	0.287	0.1686	Yes
27	Top2a	3260	0.287	0.1764	Yes
28	Il6	3265	0.286	0.1843	Yes
29	Pak1	3688	0.259	0.1696	Yes
30	Smad7	3780	0.254	0.1721	Yes
31	Bcl2l1	3813	0.251	0.1776	Yes
32	Btg3	3821	0.251	0.1843	Yes
33	Madd	4172	0.233	0.1727	No
34	Bcl2l2	4611	0.209	0.1558	No
35	Btg2	5069	0.184	0.1371	No
36	Pdcd4	5335	0.173	0.1282	No
37	Igfbp6	5583	0.161	0.1199	No
38	Anxa1	5762	0.155	0.1150	No
39	Casp8	5784	0.154	0.1183	No
40	Lgals3	5795	0.153	0.1221	No
41	Dpyd	5895	0.149	0.1212	No
42	Gstm2	6384	0.123	0.0992	No
43	Bnip3l	6419	0.122	0.1009	No
44	Casp2	6596	0.113	0.0949	No
45	Bcap31	6611	0.112	0.0974	No
46	Bmp2	6704	0.108	0.0957	No
47	Psen1	6852	0.101	0.0909	No
48	Ctnnb1	6890	0.099	0.0918	No
49	Cdkn1b	7415	0.076	0.0666	No
50	Diablo	7544	0.070	0.0619	No
51	Irf1	7585	0.069	0.0617	No
52	Ccnd1	7774	0.061	0.0537	No
53	Dffa	7810	0.059	0.0535	No
54	Sc5d	7832	0.059	0.0541	No
55	Retsat	7839	0.059	0.0554	No
56	Nefh	7926	0.055	0.0525	No
57	Rara	7987	0.052	0.0509	No
58	Wee1	8538	0.027	0.0230	No
59	Ddit3	8600	0.024	0.0204	No
60	Ppt1	8728	0.019	0.0144	No
61	Rhot2	8912	0.013	0.0052	No
62	Fdxr	9416	-0.005	-0.0209	No
63	Dnajc3	9687	-0.017	-0.0345	No
64	Cdkn1a	9757	-0.020	-0.0376	No
65	Tgfbr3	9804	-0.022	-0.0394	No
66	Pea15a	9818	-0.022	-0.0394	No
67	Casp6	9901	-0.026	-0.0429	No
68	Birc3	9990	-0.030	-0.0467	No
69	Cdk2	10045	-0.032	-0.0486	No
70	Hmox1	10117	-0.034	-0.0513	No
71	Bax	10479	-0.050	-0.0687	No
72	Gsn	10643	-0.056	-0.0757	No
73	Crebbp	10839	-0.063	-0.0840	No
74	Cav1	11014	-0.071	-0.0911	No
75	Xiap	11017	-0.071	-0.0892	No
76	Bmf	11093	-0.074	-0.0910	No
77	Psen2	11168	-0.077	-0.0927	No
78	Casp1	11221	-0.079	-0.0932	No
79	Ptk2	11262	-0.081	-0.0930	No
80	Dcn	11508	-0.090	-0.1032	No
81	Egr3	11520	-0.090	-0.1012	No
82	Add1	11572	-0.091	-0.1013	No
83	Dnm1l	11663	-0.095	-0.1033	No
84	Ebp	11687	-0.096	-0.1018	No
85	Sat1	11774	-0.100	-0.1034	No
86	Hmgb2	11895	-0.106	-0.1067	No
87	Dap3	12024	-0.111	-0.1102	No
88	Il1a	12028	-0.111	-0.1072	No
89	Gna15	12055	-0.113	-0.1054	No
90	Clu	12188	-0.118	-0.1089	No
91	Gch1	12225	-0.119	-0.1074	No
92	Rela	12297	-0.122	-0.1076	No
93	Cd44	12511	-0.133	-0.1150	No
94	Bik	12683	-0.140	-0.1199	No
95	Txnip	12963	-0.154	-0.1301	No
96	Sqstm1	12976	-0.154	-0.1263	No
97	Cflar	12990	-0.155	-0.1226	No
98	Bid	13014	-0.156	-0.1194	No
99	F2	13106	-0.159	-0.1196	No
100	Igf2r	13256	-0.166	-0.1227	No
101	Ifngr1	13346	-0.170	-0.1225	No
102	Hgf	13372	-0.171	-0.1189	No
103	Lmna	13400	-0.172	-0.1154	No
104	Rock1	13780	-0.191	-0.1298	No
105	Gsr	13921	-0.197	-0.1315	No
106	Ppp2r5b	14156	-0.207	-0.1378	No
107	Isg20	14364	-0.217	-0.1425	No
108	Bcl10	14425	-0.220	-0.1394	No
109	Il18	14456	-0.221	-0.1347	No
110	Casp3	14547	-0.226	-0.1329	No
111	Satb1	14649	-0.231	-0.1316	No
112	Vdac2	14652	-0.231	-0.1252	No
113	Casp9	14834	-0.242	-0.1278	No
114	Gpx4	15060	-0.254	-0.1323	No
115	Dap	15149	-0.258	-0.1295	No
116	Gadd45b	15284	-0.265	-0.1290	No
117	Tnfsf10	15497	-0.278	-0.1322	No
118	Dnaja1	15657	-0.286	-0.1323	No
119	Casp7	15934	-0.303	-0.1381	No
120	Lef1	15955	-0.304	-0.1305	No
121	H1f0	15989	-0.306	-0.1235	No
122	Tnf	16117	-0.315	-0.1212	No
123	Cd38	16145	-0.316	-0.1136	No
124	Ier3	16477	-0.339	-0.1213	No
125	Ank	16628	-0.349	-0.1192	No
126	Plcb2	16976	-0.375	-0.1266	No
127	Ccnd2	17053	-0.382	-0.1197	No
128	Eno2	17088	-0.385	-0.1106	No
129	Tspo	17305	-0.400	-0.1105	No
130	Tap1	17367	-0.406	-0.1021	No
131	Rnasel	17417	-0.411	-0.0930	No
132	Sod1	17497	-0.417	-0.0853	No
133	Fas	17610	-0.428	-0.0790	No
134	Gpx1	17627	-0.430	-0.0676	No
135	Bgn	17744	-0.443	-0.0611	No
136	Sod2	17786	-0.449	-0.0505	No
137	Bcl2l11	18164	-0.496	-0.0561	No
138	Nedd9	18520	-0.553	-0.0589	No
139	Krt18	18521	-0.553	-0.0431	No
140	Gadd45a	18603	-0.572	-0.0311	No
141	Timp2	18782	-0.618	-0.0228	No
142	Ifitm3	18864	-0.644	-0.0088	No
143	Pdgfrb	19278	-1.121	0.0015	No