DatasetMEP.MEP.mega_Pheno.cls
#Group2_versus_Group3.MEP.mega_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeMEP.mega_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.35892203
Normalized Enrichment Score (NES)-1.1337649
Nominal p-value0.35084033
FDR q-value0.8470041
FWER p-Value0.964
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ndufs3560.8130.0164No
2Mtrf12020.6590.0245No
3Slc25a204020.5640.0275No
4Pdhx5390.5260.0329No
5Hspa98580.4630.0273No
6Lrpprc9060.4530.0356No
7Hadhb14870.3860.0145No
8Cpt1a14980.3850.0231No
9Dld20230.3410.0038No
10Cox7a2l22400.3230.0002No
11Atp6v1h23140.3170.0039No
12Aco225030.3040.0013No
13Cox1725530.3020.0059No
14Opa128210.281-0.0014No
15Ech129870.271-0.0035No
16Supv3l132390.255-0.0106No
17Ndufa532710.253-0.0062No
18Acadm33470.248-0.0042No
19Acadsb36700.231-0.0156No
20Tomm70a37420.226-0.0139No
21Ndufs637500.226-0.0089No
22Dlst39090.217-0.0120No
23Cox6c40790.210-0.0159No
24Ogdh41210.208-0.0130No
25Slc25a1144050.194-0.0232No
26Atp6v0c44840.190-0.0228No
27Uqcr1148620.173-0.0384No
28Fh151690.160-0.0506No
29Atp6v0e54470.148-0.0615No
30Vdac154620.148-0.0588No
31Mrps1257390.136-0.0699No
32Iscu58620.131-0.0732No
33Ndufb258670.131-0.0703No
34Pdhb58800.130-0.0679No
35Retsat60760.120-0.0752No
36Hccs62110.115-0.0795No
37Idh3b62510.113-0.0788No
38Idh262820.112-0.0777No
39Gpi164990.103-0.0866No
40Bckdha66640.097-0.0928No
41Mtx266980.096-0.0923No
42Mgst367680.093-0.0937No
43Vdac369120.087-0.0991No
44Rhot169430.086-0.0986No
45Oxa1l69690.085-0.0979No
46Afg3l270450.082-0.0999No
47Acaa1a72810.073-0.1104No
48Sucla273900.069-0.1144No
49Grpel174120.068-0.1139No
50Mrps3077820.054-0.1319No
51Uqcrq80890.042-0.1469No
52Abcb782620.036-0.1551No
53Hadha83730.032-0.1601No
54Mtrr84540.029-0.1636No
55Cyb5a85500.026-0.1679No
56Dlat86750.021-0.1739No
57Ndufa886810.020-0.1737No
58Ndufs187480.018-0.1767No
59Prdx387730.017-0.1776No
60Mrps1191140.005-0.1952No
61Pmpca9511-0.008-0.2157No
62Timm8b9543-0.009-0.2171No
63Atp6v1c19610-0.011-0.2203No
64Ndufs49725-0.015-0.2259No
65Cox109842-0.019-0.2315No
66Aldh6a19872-0.020-0.2326No
67Mdh29879-0.020-0.2324No
68Mdh19894-0.021-0.2326No
69Uqcr109910-0.022-0.2329No
70Mrpl119969-0.024-0.2354No
71Phyh10008-0.026-0.2367No
72Fxn10016-0.026-0.2365No
73Idh3a10046-0.027-0.2373No
74Atp6v1f10276-0.036-0.2485No
75Atp6ap110341-0.039-0.2509No
76Atp1b110354-0.039-0.2506No
77Acaa210485-0.045-0.2563No
78Ndufb610509-0.046-0.2564No
79Immt10611-0.049-0.2605No
80Decr110762-0.054-0.2671No
81Uqcrc110776-0.055-0.2665No
82Cox8a10852-0.058-0.2690No
83Got210891-0.060-0.2696No
84Uqcrfs111065-0.067-0.2770No
85Ndufa411287-0.075-0.2868No
86Alas111328-0.077-0.2871No
87Acadvl11361-0.078-0.2869No
88Nnt11399-0.079-0.2869No
89Mrpl1511579-0.086-0.2942No
90Ndufs811669-0.089-0.2968No
91Glud111697-0.091-0.2960No
92Mfn211926-0.101-0.3056No
93Rhot211944-0.102-0.3040No
94Timm911991-0.104-0.3040No
95Mrps2212210-0.113-0.3127No
96Tcirg112265-0.115-0.3128No
97Cox1112307-0.116-0.3122No
98Ndufb512345-0.118-0.3113No
99Atp6v1e112362-0.118-0.3093No
100Cox5b12432-0.122-0.3100No
101Atp6v1d12546-0.127-0.3129No
102Atp6v1g112834-0.139-0.3246No
103Sdhb12917-0.144-0.3255No
104Bdh213007-0.148-0.3266No
105Sdha13022-0.149-0.3238No
106Etfa13056-0.150-0.3220No
107Surf113198-0.156-0.3256No
108Eci113258-0.158-0.3250No
109Suclg113480-0.167-0.3325No
110Mrpl3413546-0.170-0.3319No
111Ndufs713599-0.173-0.3305No
112Ndufa913845-0.184-0.3390No
113Etfdh14058-0.194-0.3454No
114Ndufa114236-0.202-0.3499No
115Pdha114246-0.203-0.3455No
116Atp5pb14265-0.204-0.3416No
117Oat14342-0.208-0.3406No
118Acat114555-0.218-0.3465No
119Etfb14723-0.227-0.3499No
120Cox1514848-0.233-0.3508No
121Atp6v0b14977-0.241-0.3518No
122Cyc115115-0.247-0.3530Yes
123Gpx415131-0.248-0.3479Yes
124Timm1315174-0.252-0.3441Yes
125Bax15178-0.252-0.3383Yes
126Fdx115351-0.261-0.3411Yes
127Ndufv215457-0.267-0.3402Yes
128Hsd17b1015495-0.270-0.3357Yes
129Htra215496-0.270-0.3293Yes
130Slc25a1215551-0.271-0.3257Yes
131Polr2f15554-0.271-0.3194Yes
132Tomm2215703-0.280-0.3204Yes
133Casp715719-0.281-0.3145Yes
134Ndufs215784-0.285-0.3111Yes
135Pdk415825-0.288-0.3063Yes
136Aifm115934-0.297-0.3049Yes
137Cox4i116122-0.310-0.3073Yes
138Ndufa616203-0.315-0.3040Yes
139Cox7c16294-0.321-0.3011Yes
140Cox7a216319-0.323-0.2947Yes
141Cox5a16379-0.327-0.2900Yes
142Cox7b16395-0.328-0.2830Yes
143Ndufa716555-0.338-0.2833Yes
144Ndufb816649-0.344-0.2799Yes
145Uqcrh16692-0.347-0.2739Yes
146Timm17a16753-0.352-0.2687Yes
147Slc25a416839-0.358-0.2646Yes
148Uqcrc216864-0.360-0.2573Yes
149Cox6a116939-0.367-0.2524Yes
150Cs16975-0.369-0.2455Yes
151Por17037-0.376-0.2397Yes
152Timm1017227-0.392-0.2403Yes
153Ndufab117231-0.393-0.2311Yes
154Ndufb717238-0.393-0.2221Yes
155Ndufc217272-0.396-0.2144Yes
156Ndufb317448-0.409-0.2138Yes
157Pdp117495-0.412-0.2064Yes
158Mpc117504-0.413-0.1970Yes
159Slc25a517642-0.427-0.1940Yes
160Vdac217733-0.436-0.1884Yes
161Cox6b117989-0.464-0.1907Yes
162Echs118010-0.468-0.1806Yes
163Idh118028-0.470-0.1703Yes
164Sdhc18036-0.471-0.1594Yes
165Mrps1518184-0.494-0.1554Yes
166Mrpl3518208-0.497-0.1448Yes
167Ldha18254-0.504-0.1351Yes
168Phb218309-0.515-0.1257Yes
169Ndufa318349-0.523-0.1153Yes
170Slc25a318431-0.539-0.1067Yes
171Idh3g18450-0.543-0.0947Yes
172Sdhd18502-0.554-0.0842Yes
173Ndufv118511-0.555-0.0714Yes
174Ndufc118514-0.555-0.0583Yes
175Nqo218659-0.587-0.0519Yes
176Timm5018764-0.613-0.0428Yes
177Ldhb18944-0.671-0.0361Yes
178Cyb5r318988-0.696-0.0218Yes
179Ndufa219094-0.773-0.0090Yes
180Uqcrb19180-0.8430.0066Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION