| Dataset | MEP.MEP.mega_Pheno.cls #Group2_versus_Group3.MEP.mega_Pheno.cls #Group2_versus_Group3_repos |
| Phenotype | MEP.mega_Pheno.cls#Group2_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_OXIDATIVE_PHOSPHORYLATION |
| Enrichment Score (ES) | -0.35892203 |
| Normalized Enrichment Score (NES) | -1.1337649 |
| Nominal p-value | 0.35084033 |
| FDR q-value | 0.8470041 |
| FWER p-Value | 0.964 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Ndufs3 | 56 | 0.813 | 0.0164 | No |
| 2 | Mtrf1 | 202 | 0.659 | 0.0245 | No |
| 3 | Slc25a20 | 402 | 0.564 | 0.0275 | No |
| 4 | Pdhx | 539 | 0.526 | 0.0329 | No |
| 5 | Hspa9 | 858 | 0.463 | 0.0273 | No |
| 6 | Lrpprc | 906 | 0.453 | 0.0356 | No |
| 7 | Hadhb | 1487 | 0.386 | 0.0145 | No |
| 8 | Cpt1a | 1498 | 0.385 | 0.0231 | No |
| 9 | Dld | 2023 | 0.341 | 0.0038 | No |
| 10 | Cox7a2l | 2240 | 0.323 | 0.0002 | No |
| 11 | Atp6v1h | 2314 | 0.317 | 0.0039 | No |
| 12 | Aco2 | 2503 | 0.304 | 0.0013 | No |
| 13 | Cox17 | 2553 | 0.302 | 0.0059 | No |
| 14 | Opa1 | 2821 | 0.281 | -0.0014 | No |
| 15 | Ech1 | 2987 | 0.271 | -0.0035 | No |
| 16 | Supv3l1 | 3239 | 0.255 | -0.0106 | No |
| 17 | Ndufa5 | 3271 | 0.253 | -0.0062 | No |
| 18 | Acadm | 3347 | 0.248 | -0.0042 | No |
| 19 | Acadsb | 3670 | 0.231 | -0.0156 | No |
| 20 | Tomm70a | 3742 | 0.226 | -0.0139 | No |
| 21 | Ndufs6 | 3750 | 0.226 | -0.0089 | No |
| 22 | Dlst | 3909 | 0.217 | -0.0120 | No |
| 23 | Cox6c | 4079 | 0.210 | -0.0159 | No |
| 24 | Ogdh | 4121 | 0.208 | -0.0130 | No |
| 25 | Slc25a11 | 4405 | 0.194 | -0.0232 | No |
| 26 | Atp6v0c | 4484 | 0.190 | -0.0228 | No |
| 27 | Uqcr11 | 4862 | 0.173 | -0.0384 | No |
| 28 | Fh1 | 5169 | 0.160 | -0.0506 | No |
| 29 | Atp6v0e | 5447 | 0.148 | -0.0615 | No |
| 30 | Vdac1 | 5462 | 0.148 | -0.0588 | No |
| 31 | Mrps12 | 5739 | 0.136 | -0.0699 | No |
| 32 | Iscu | 5862 | 0.131 | -0.0732 | No |
| 33 | Ndufb2 | 5867 | 0.131 | -0.0703 | No |
| 34 | Pdhb | 5880 | 0.130 | -0.0679 | No |
| 35 | Retsat | 6076 | 0.120 | -0.0752 | No |
| 36 | Hccs | 6211 | 0.115 | -0.0795 | No |
| 37 | Idh3b | 6251 | 0.113 | -0.0788 | No |
| 38 | Idh2 | 6282 | 0.112 | -0.0777 | No |
| 39 | Gpi1 | 6499 | 0.103 | -0.0866 | No |
| 40 | Bckdha | 6664 | 0.097 | -0.0928 | No |
| 41 | Mtx2 | 6698 | 0.096 | -0.0923 | No |
| 42 | Mgst3 | 6768 | 0.093 | -0.0937 | No |
| 43 | Vdac3 | 6912 | 0.087 | -0.0991 | No |
| 44 | Rhot1 | 6943 | 0.086 | -0.0986 | No |
| 45 | Oxa1l | 6969 | 0.085 | -0.0979 | No |
| 46 | Afg3l2 | 7045 | 0.082 | -0.0999 | No |
| 47 | Acaa1a | 7281 | 0.073 | -0.1104 | No |
| 48 | Sucla2 | 7390 | 0.069 | -0.1144 | No |
| 49 | Grpel1 | 7412 | 0.068 | -0.1139 | No |
| 50 | Mrps30 | 7782 | 0.054 | -0.1319 | No |
| 51 | Uqcrq | 8089 | 0.042 | -0.1469 | No |
| 52 | Abcb7 | 8262 | 0.036 | -0.1551 | No |
| 53 | Hadha | 8373 | 0.032 | -0.1601 | No |
| 54 | Mtrr | 8454 | 0.029 | -0.1636 | No |
| 55 | Cyb5a | 8550 | 0.026 | -0.1679 | No |
| 56 | Dlat | 8675 | 0.021 | -0.1739 | No |
| 57 | Ndufa8 | 8681 | 0.020 | -0.1737 | No |
| 58 | Ndufs1 | 8748 | 0.018 | -0.1767 | No |
| 59 | Prdx3 | 8773 | 0.017 | -0.1776 | No |
| 60 | Mrps11 | 9114 | 0.005 | -0.1952 | No |
| 61 | Pmpca | 9511 | -0.008 | -0.2157 | No |
| 62 | Timm8b | 9543 | -0.009 | -0.2171 | No |
| 63 | Atp6v1c1 | 9610 | -0.011 | -0.2203 | No |
| 64 | Ndufs4 | 9725 | -0.015 | -0.2259 | No |
| 65 | Cox10 | 9842 | -0.019 | -0.2315 | No |
| 66 | Aldh6a1 | 9872 | -0.020 | -0.2326 | No |
| 67 | Mdh2 | 9879 | -0.020 | -0.2324 | No |
| 68 | Mdh1 | 9894 | -0.021 | -0.2326 | No |
| 69 | Uqcr10 | 9910 | -0.022 | -0.2329 | No |
| 70 | Mrpl11 | 9969 | -0.024 | -0.2354 | No |
| 71 | Phyh | 10008 | -0.026 | -0.2367 | No |
| 72 | Fxn | 10016 | -0.026 | -0.2365 | No |
| 73 | Idh3a | 10046 | -0.027 | -0.2373 | No |
| 74 | Atp6v1f | 10276 | -0.036 | -0.2485 | No |
| 75 | Atp6ap1 | 10341 | -0.039 | -0.2509 | No |
| 76 | Atp1b1 | 10354 | -0.039 | -0.2506 | No |
| 77 | Acaa2 | 10485 | -0.045 | -0.2563 | No |
| 78 | Ndufb6 | 10509 | -0.046 | -0.2564 | No |
| 79 | Immt | 10611 | -0.049 | -0.2605 | No |
| 80 | Decr1 | 10762 | -0.054 | -0.2671 | No |
| 81 | Uqcrc1 | 10776 | -0.055 | -0.2665 | No |
| 82 | Cox8a | 10852 | -0.058 | -0.2690 | No |
| 83 | Got2 | 10891 | -0.060 | -0.2696 | No |
| 84 | Uqcrfs1 | 11065 | -0.067 | -0.2770 | No |
| 85 | Ndufa4 | 11287 | -0.075 | -0.2868 | No |
| 86 | Alas1 | 11328 | -0.077 | -0.2871 | No |
| 87 | Acadvl | 11361 | -0.078 | -0.2869 | No |
| 88 | Nnt | 11399 | -0.079 | -0.2869 | No |
| 89 | Mrpl15 | 11579 | -0.086 | -0.2942 | No |
| 90 | Ndufs8 | 11669 | -0.089 | -0.2968 | No |
| 91 | Glud1 | 11697 | -0.091 | -0.2960 | No |
| 92 | Mfn2 | 11926 | -0.101 | -0.3056 | No |
| 93 | Rhot2 | 11944 | -0.102 | -0.3040 | No |
| 94 | Timm9 | 11991 | -0.104 | -0.3040 | No |
| 95 | Mrps22 | 12210 | -0.113 | -0.3127 | No |
| 96 | Tcirg1 | 12265 | -0.115 | -0.3128 | No |
| 97 | Cox11 | 12307 | -0.116 | -0.3122 | No |
| 98 | Ndufb5 | 12345 | -0.118 | -0.3113 | No |
| 99 | Atp6v1e1 | 12362 | -0.118 | -0.3093 | No |
| 100 | Cox5b | 12432 | -0.122 | -0.3100 | No |
| 101 | Atp6v1d | 12546 | -0.127 | -0.3129 | No |
| 102 | Atp6v1g1 | 12834 | -0.139 | -0.3246 | No |
| 103 | Sdhb | 12917 | -0.144 | -0.3255 | No |
| 104 | Bdh2 | 13007 | -0.148 | -0.3266 | No |
| 105 | Sdha | 13022 | -0.149 | -0.3238 | No |
| 106 | Etfa | 13056 | -0.150 | -0.3220 | No |
| 107 | Surf1 | 13198 | -0.156 | -0.3256 | No |
| 108 | Eci1 | 13258 | -0.158 | -0.3250 | No |
| 109 | Suclg1 | 13480 | -0.167 | -0.3325 | No |
| 110 | Mrpl34 | 13546 | -0.170 | -0.3319 | No |
| 111 | Ndufs7 | 13599 | -0.173 | -0.3305 | No |
| 112 | Ndufa9 | 13845 | -0.184 | -0.3390 | No |
| 113 | Etfdh | 14058 | -0.194 | -0.3454 | No |
| 114 | Ndufa1 | 14236 | -0.202 | -0.3499 | No |
| 115 | Pdha1 | 14246 | -0.203 | -0.3455 | No |
| 116 | Atp5pb | 14265 | -0.204 | -0.3416 | No |
| 117 | Oat | 14342 | -0.208 | -0.3406 | No |
| 118 | Acat1 | 14555 | -0.218 | -0.3465 | No |
| 119 | Etfb | 14723 | -0.227 | -0.3499 | No |
| 120 | Cox15 | 14848 | -0.233 | -0.3508 | No |
| 121 | Atp6v0b | 14977 | -0.241 | -0.3518 | No |
| 122 | Cyc1 | 15115 | -0.247 | -0.3530 | Yes |
| 123 | Gpx4 | 15131 | -0.248 | -0.3479 | Yes |
| 124 | Timm13 | 15174 | -0.252 | -0.3441 | Yes |
| 125 | Bax | 15178 | -0.252 | -0.3383 | Yes |
| 126 | Fdx1 | 15351 | -0.261 | -0.3411 | Yes |
| 127 | Ndufv2 | 15457 | -0.267 | -0.3402 | Yes |
| 128 | Hsd17b10 | 15495 | -0.270 | -0.3357 | Yes |
| 129 | Htra2 | 15496 | -0.270 | -0.3293 | Yes |
| 130 | Slc25a12 | 15551 | -0.271 | -0.3257 | Yes |
| 131 | Polr2f | 15554 | -0.271 | -0.3194 | Yes |
| 132 | Tomm22 | 15703 | -0.280 | -0.3204 | Yes |
| 133 | Casp7 | 15719 | -0.281 | -0.3145 | Yes |
| 134 | Ndufs2 | 15784 | -0.285 | -0.3111 | Yes |
| 135 | Pdk4 | 15825 | -0.288 | -0.3063 | Yes |
| 136 | Aifm1 | 15934 | -0.297 | -0.3049 | Yes |
| 137 | Cox4i1 | 16122 | -0.310 | -0.3073 | Yes |
| 138 | Ndufa6 | 16203 | -0.315 | -0.3040 | Yes |
| 139 | Cox7c | 16294 | -0.321 | -0.3011 | Yes |
| 140 | Cox7a2 | 16319 | -0.323 | -0.2947 | Yes |
| 141 | Cox5a | 16379 | -0.327 | -0.2900 | Yes |
| 142 | Cox7b | 16395 | -0.328 | -0.2830 | Yes |
| 143 | Ndufa7 | 16555 | -0.338 | -0.2833 | Yes |
| 144 | Ndufb8 | 16649 | -0.344 | -0.2799 | Yes |
| 145 | Uqcrh | 16692 | -0.347 | -0.2739 | Yes |
| 146 | Timm17a | 16753 | -0.352 | -0.2687 | Yes |
| 147 | Slc25a4 | 16839 | -0.358 | -0.2646 | Yes |
| 148 | Uqcrc2 | 16864 | -0.360 | -0.2573 | Yes |
| 149 | Cox6a1 | 16939 | -0.367 | -0.2524 | Yes |
| 150 | Cs | 16975 | -0.369 | -0.2455 | Yes |
| 151 | Por | 17037 | -0.376 | -0.2397 | Yes |
| 152 | Timm10 | 17227 | -0.392 | -0.2403 | Yes |
| 153 | Ndufab1 | 17231 | -0.393 | -0.2311 | Yes |
| 154 | Ndufb7 | 17238 | -0.393 | -0.2221 | Yes |
| 155 | Ndufc2 | 17272 | -0.396 | -0.2144 | Yes |
| 156 | Ndufb3 | 17448 | -0.409 | -0.2138 | Yes |
| 157 | Pdp1 | 17495 | -0.412 | -0.2064 | Yes |
| 158 | Mpc1 | 17504 | -0.413 | -0.1970 | Yes |
| 159 | Slc25a5 | 17642 | -0.427 | -0.1940 | Yes |
| 160 | Vdac2 | 17733 | -0.436 | -0.1884 | Yes |
| 161 | Cox6b1 | 17989 | -0.464 | -0.1907 | Yes |
| 162 | Echs1 | 18010 | -0.468 | -0.1806 | Yes |
| 163 | Idh1 | 18028 | -0.470 | -0.1703 | Yes |
| 164 | Sdhc | 18036 | -0.471 | -0.1594 | Yes |
| 165 | Mrps15 | 18184 | -0.494 | -0.1554 | Yes |
| 166 | Mrpl35 | 18208 | -0.497 | -0.1448 | Yes |
| 167 | Ldha | 18254 | -0.504 | -0.1351 | Yes |
| 168 | Phb2 | 18309 | -0.515 | -0.1257 | Yes |
| 169 | Ndufa3 | 18349 | -0.523 | -0.1153 | Yes |
| 170 | Slc25a3 | 18431 | -0.539 | -0.1067 | Yes |
| 171 | Idh3g | 18450 | -0.543 | -0.0947 | Yes |
| 172 | Sdhd | 18502 | -0.554 | -0.0842 | Yes |
| 173 | Ndufv1 | 18511 | -0.555 | -0.0714 | Yes |
| 174 | Ndufc1 | 18514 | -0.555 | -0.0583 | Yes |
| 175 | Nqo2 | 18659 | -0.587 | -0.0519 | Yes |
| 176 | Timm50 | 18764 | -0.613 | -0.0428 | Yes |
| 177 | Ldhb | 18944 | -0.671 | -0.0361 | Yes |
| 178 | Cyb5r3 | 18988 | -0.696 | -0.0218 | Yes |
| 179 | Ndufa2 | 19094 | -0.773 | -0.0090 | Yes |
| 180 | Uqcrb | 19180 | -0.843 | 0.0066 | Yes |

