Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group2_versus_Group3.MEP.mega_Pheno.cls #Group2_versus_Group3_repos
Phenotype	MEP.mega_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	1
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.18600348
Normalized Enrichment Score (NES)	0.7549485
Nominal p-value	0.93426293
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ldb3	119	0.720	0.0145	Yes
2	Mylpf	190	0.669	0.0301	Yes
3	Agrn	272	0.617	0.0436	Yes
4	Mras	289	0.609	0.0603	Yes
5	Sptan1	373	0.576	0.0726	Yes
6	Eif4a2	412	0.562	0.0868	Yes
7	Sspn	419	0.559	0.1025	Yes
8	Vipr1	448	0.551	0.1169	Yes
9	Ak1	508	0.533	0.1292	Yes
10	Sirt2	585	0.515	0.1401	Yes
11	Col4a2	830	0.468	0.1408	Yes
12	Clu	875	0.459	0.1517	Yes
13	Mylk	1234	0.410	0.1448	Yes
14	Rit1	1284	0.404	0.1539	Yes
15	Pdlim7	1694	0.365	0.1431	Yes
16	Myh9	1697	0.365	0.1535	Yes
17	Tnnc1	1808	0.355	0.1580	Yes
18	Plxnb2	1837	0.353	0.1667	Yes
19	Itgb5	2119	0.331	0.1615	Yes
20	Pfkm	2283	0.320	0.1622	Yes
21	Lpin1	2546	0.302	0.1573	Yes
22	Flii	2718	0.289	0.1567	Yes
23	Adam12	2928	0.274	0.1537	Yes
24	Gsn	3004	0.270	0.1575	Yes
25	Notch1	3031	0.268	0.1639	Yes
26	Sparc	3111	0.264	0.1673	Yes
27	Myl4	3131	0.262	0.1739	Yes
28	Itgb1	3140	0.261	0.1810	Yes
29	Ppfia4	3244	0.255	0.1829	Yes
30	Bhlhe40	3324	0.250	0.1860	Yes
31	Myom1	3558	0.236	0.1806	No
32	Fhl1	3619	0.233	0.1842	No
33	Smtn	3806	0.222	0.1809	No
34	Ifrd1	3904	0.217	0.1821	No
35	Igf1	3991	0.213	0.1837	No
36	Stc2	4418	0.194	0.1671	No
37	Sgcd	4468	0.190	0.1700	No
38	Mef2a	4566	0.185	0.1703	No
39	Kcnh2	4830	0.175	0.1616	No
40	Tnnt1	4844	0.174	0.1659	No
41	Tagln	4946	0.169	0.1655	No
42	Psen2	5008	0.166	0.1671	No
43	Agl	5104	0.161	0.1668	No
44	Myom2	5111	0.161	0.1711	No
45	Myo1c	5250	0.157	0.1684	No
46	Ache	5592	0.142	0.1547	No
47	Slc6a8	5645	0.140	0.1560	No
48	Hdac5	5894	0.129	0.1468	No
49	Sorbs1	6074	0.120	0.1409	No
50	Gabarapl2	6128	0.119	0.1416	No
51	Ankrd2	6288	0.112	0.1365	No
52	Akt2	6300	0.111	0.1391	No
53	Prnp	6462	0.105	0.1337	No
54	Aebp1	6767	0.093	0.1206	No
55	Pick1	6803	0.092	0.1214	No
56	Svil	6935	0.086	0.1170	No
57	Adcy9	6936	0.086	0.1195	No
58	Acsl1	7241	0.074	0.1058	No
59	Col1a1	7258	0.073	0.1070	No
60	Pde4dip	7530	0.063	0.0947	No
61	Cryab	7586	0.061	0.0936	No
62	Tnnt3	7632	0.059	0.0930	No
63	Large1	7768	0.055	0.0875	No
64	Ocel1	8148	0.040	0.0689	No
65	Bag1	8206	0.038	0.0670	No
66	Dmd	8734	0.019	0.0400	No
67	Reep1	9018	0.008	0.0255	No
68	Foxo4	9047	0.007	0.0243	No
69	Nav2	9105	0.005	0.0214	No
70	Cd36	9162	0.003	0.0186	No
71	App	9409	-0.005	0.0059	No
72	Cdh13	9751	-0.015	-0.0115	No
73	Ckb	9863	-0.020	-0.0167	No
74	Atp6ap1	10341	-0.039	-0.0405	No
75	Mef2c	10633	-0.050	-0.0542	No
76	Sh2b1	10771	-0.055	-0.0598	No
77	Wwtr1	10839	-0.058	-0.0616	No
78	Rb1	11235	-0.073	-0.0801	No
79	Pkia	11256	-0.074	-0.0790	No
80	Tsc2	11279	-0.075	-0.0780	No
81	Myl6b	11386	-0.079	-0.0813	No
82	Dtna	11447	-0.080	-0.0821	No
83	Cnn3	11563	-0.085	-0.0857	No
84	Dapk2	11570	-0.085	-0.0835	No
85	Ephb3	12043	-0.106	-0.1051	No
86	Ryr1	12115	-0.109	-0.1057	No
87	Mef2d	12171	-0.111	-0.1053	No
88	Bin1	12328	-0.117	-0.1101	No
89	Nos1	12353	-0.118	-0.1079	No
90	Ncam1	12458	-0.123	-0.1098	No
91	Csrp3	12545	-0.127	-0.1107	No
92	Camk2b	12583	-0.128	-0.1089	No
93	Lsp1	12700	-0.134	-0.1111	No
94	Gaa	12721	-0.135	-0.1082	No
95	Erbb3	13003	-0.148	-0.1186	No
96	Gpx3	13211	-0.157	-0.1249	No
97	Tpm2	13368	-0.163	-0.1284	No
98	Itgb4	13410	-0.164	-0.1258	No
99	Syngr2	13427	-0.165	-0.1219	No
100	Mapre3	13632	-0.174	-0.1275	No
101	Hspb8	13655	-0.176	-0.1236	No
102	Tgfb1	13699	-0.178	-0.1208	No
103	Sh3bgr	13947	-0.189	-0.1282	No
104	Atp2a1	14161	-0.199	-0.1336	No
105	Pygm	14392	-0.210	-0.1396	No
106	Myh11	14689	-0.225	-0.1485	No
107	Ctf1	14694	-0.225	-0.1423	No
108	Cdkn1a	14702	-0.226	-0.1361	No
109	Sorbs3	14799	-0.231	-0.1345	No
110	Kcnh1	14974	-0.241	-0.1366	No
111	Tead4	15156	-0.250	-0.1389	No
112	Tpm3	15261	-0.257	-0.1369	No
113	Sphk1	15366	-0.262	-0.1348	No
114	Gadd45b	15368	-0.262	-0.1273	No
115	Fkbp1b	15427	-0.265	-0.1227	No
116	Igfbp7	15563	-0.272	-0.1219	No
117	Fdps	15598	-0.274	-0.1158	No
118	Mapk12	16021	-0.303	-0.1291	No
119	Hbegf	16198	-0.314	-0.1292	No
120	Mybpc3	16401	-0.328	-0.1303	No
121	Crat	16416	-0.329	-0.1216	No
122	Klf5	16653	-0.344	-0.1240	No
123	Gnao1	16845	-0.359	-0.1236	No
124	Ptp4a3	16880	-0.362	-0.1150	No
125	Ckmt2	17351	-0.401	-0.1280	No
126	Actn2	17725	-0.435	-0.1349	No
127	Nqo1	17752	-0.437	-0.1237	No
128	Schip1	17820	-0.443	-0.1145	No
129	Lama2	17850	-0.447	-0.1031	No
130	Cox7a1	18094	-0.480	-0.1020	No
131	Eno3	18105	-0.482	-0.0887	No
132	Tpd52l1	18259	-0.504	-0.0821	No
133	Kifc3	18350	-0.523	-0.0718	No
134	Chrnb1	18374	-0.528	-0.0578	No
135	Ablim1	18814	-0.624	-0.0627	No
136	Dmpk	18869	-0.642	-0.0470	No
137	Fgf2	18995	-0.701	-0.0334	No
138	Pcx	19144	-0.820	-0.0175	No
139	Gja5	19227	-0.902	0.0042	No