DatasetMEP.MEP.mega_Pheno.cls
#Group2_versus_Group3.MEP.mega_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeMEP.mega_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)0.21729149
Normalized Enrichment Score (NES)0.78497314
Nominal p-value0.69617707
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Irf9700.7890.0188Yes
2Selp780.7730.0404Yes
3Vcam12300.6380.0507Yes
4Rtp43900.5690.0585Yes
5Sspn4190.5590.0730Yes
6Casp44230.5590.0887Yes
7Myd885650.5220.0962Yes
8Oas29560.4470.0885Yes
9Lcp29880.4410.0994Yes
10Ifi3010690.4290.1075Yes
11Trafd110810.4260.1190Yes
12Tnfaip312390.4090.1224Yes
13Ogfr15230.3820.1185Yes
14Parp1415820.3780.1262Yes
15Stat316520.3690.1331Yes
16Rnf21317060.3640.1407Yes
17Cmtr119360.3460.1386Yes
18Il620380.3390.1430Yes
19Nod120580.3370.1516Yes
20Pnpt121030.3320.1587Yes
21Marchf121100.3320.1678Yes
22Socs324960.3050.1564Yes
23Nampt25000.3040.1649Yes
24Mvp25010.3040.1735Yes
25Jak225900.2990.1774Yes
26Znfx126130.2980.1848Yes
27Oasl128040.2830.1829Yes
28Trim2528350.2810.1893Yes
29Pim129680.2720.1901Yes
30Rigi33520.2480.1772Yes
31Ifih133760.2470.1830Yes
32Pfkp34020.2450.1886Yes
33Trim2134120.2450.1951Yes
34Icam135760.2350.1933Yes
35Cd4035910.2350.1992Yes
36Isoc137010.2290.2001Yes
37Rsad238350.2210.1994Yes
38Cd6938450.2200.2052Yes
39Sp11038610.2200.2106Yes
40Ptpn138720.2190.2164Yes
41Herc641680.2060.2068Yes
42Irf542690.2010.2073Yes
43Oas342980.2000.2115Yes
44Cd27443370.1980.2152Yes
45Rnf3144030.1940.2173Yes
46Ifit245190.1880.2166No
47Eif2ak246940.1800.2126No
48Txnip49640.1680.2034No
49Cxcl1051120.1610.2003No
50Cmklr152530.1570.1974No
51Il4ra52890.1550.2000No
52Bst253600.1520.2006No
53Psmb1055340.1450.1957No
54Fgl257160.1370.1902No
55Mx259350.1280.1824No
56Cfb60230.1230.1814No
57Ncoa360810.1200.1818No
58Casp860850.1200.1851No
59Psme261970.1150.1825No
60Tdrd762530.1130.1829No
61Ripk163050.1110.1834No
62Cmpk263190.1110.1858No
63Tapbp64490.1050.1821No
64Isg1569820.0840.1567No
65Parp1271400.0780.1507No
66Gbp371590.0770.1520No
67Xaf172060.0750.1517No
68Ddx6075060.0640.1379No
69Sppl2a75080.0640.1397No
70Auts276430.0590.1344No
71Il15ra77420.0550.1308No
72Lats277670.0550.1311No
73Btg178090.0530.1305No
74Samd9l80800.0420.1176No
75Fcgr182560.0360.1095No
76Lysmd282610.0360.1103No
77Epsti184310.0290.1023No
78Ptpn284740.0280.1009No
79Stat485600.0250.0971No
80Il10ra87250.0190.0891No
81P2ry1487350.0190.0892No
82Ube2l688310.0150.0846No
83Dhx5889040.0120.0812No
84Il791280.0040.0697No
85Slc25a2891430.0040.0691No
86Pla2g4a9555-0.0100.0479No
87Helz29765-0.0160.0374No
88Zbp19766-0.0160.0379No
89Adar9786-0.0170.0373No
90Plscr19824-0.0180.0359No
91Hif1a9889-0.0210.0332No
92Irf110147-0.0310.0206No
93Peli110211-0.0330.0183No
94Lap310287-0.0360.0154No
95Psma210474-0.0440.0069No
96Rapgef610516-0.0460.0061No
97Nup9310567-0.0480.0048No
98Sri10600-0.0490.0045No
99Irf710723-0.053-0.0003No
100Batf210734-0.0530.0007No
101Isg2011043-0.066-0.0136No
102Wars111062-0.066-0.0126No
103Stat111267-0.074-0.0212No
104Itgb711434-0.080-0.0276No
105Rbck111471-0.081-0.0271No
106Casp311534-0.084-0.0280No
107Casp111844-0.097-0.0413No
108Pde4b11869-0.099-0.0398No
109Sod211918-0.100-0.0394No
110Upp111932-0.101-0.0372No
111Nlrc511964-0.103-0.0359No
112Tor1b12013-0.105-0.0355No
113Samhd112087-0.108-0.0362No
114Arid5b12094-0.109-0.0334No
115Cd7412368-0.119-0.0443No
116Ifitm312396-0.120-0.0423No
117Bank112488-0.124-0.0435No
118Psmb912672-0.133-0.0493No
119St3gal512749-0.136-0.0494No
120Ifi2712794-0.138-0.0478No
121Trim1412862-0.140-0.0473No
122Ptpn612916-0.144-0.0460No
123Vamp813013-0.148-0.0468No
124Il18bp13092-0.152-0.0466No
125Cd3813203-0.156-0.0479No
126Cd8613270-0.159-0.0468No
127Psmb813437-0.165-0.0508No
128Nfkb113465-0.166-0.0475No
129Nfkbia13511-0.169-0.0451No
130Pml13884-0.186-0.0592No
131Tnfsf1014035-0.193-0.0616No
132Psma314103-0.196-0.0595No
133Mthfd214128-0.197-0.0551No
134Ifi4414132-0.197-0.0497No
135Stat214190-0.200-0.0470No
136Socs114228-0.202-0.0432No
137Fas14366-0.209-0.0444No
138Psmb214376-0.210-0.0389No
139Ifi3514484-0.216-0.0383No
140Cdkn1a14702-0.226-0.0433No
141Gch114730-0.227-0.0382No
142Gpr1814870-0.234-0.0388No
143Ciita14965-0.240-0.0369No
144Usp1815072-0.246-0.0354No
145Trim2615167-0.251-0.0332No
146Ifitm215464-0.268-0.0411No
147B2m15708-0.280-0.0458No
148Casp715719-0.281-0.0383No
149Bpgm15764-0.284-0.0325No
150Ifnar215865-0.291-0.0295No
151Arl4a15965-0.299-0.0262No
152Tap115972-0.300-0.0180No
153Irf215987-0.301-0.0101No
154Nmi16006-0.302-0.0025No
155Eif4e316041-0.3040.0044No
156Tnfaip216205-0.3150.0048No
157Lgals3bp16313-0.3230.0084No
158Ly6e16323-0.3230.0171No
159H2-DMa16363-0.3260.0244No
160Psme116489-0.3340.0274No
161Vamp516678-0.3460.0274No
162Il1516799-0.3550.0312No
163H2-Aa17161-0.3860.0233No
164Ccl517185-0.3880.0331No
165Ifit317662-0.4280.0204No
166St8sia417821-0.4430.0248No
167Pnp18273-0.5060.0156No
168Ripk218837-0.6300.0041No
169Irf819016-0.7160.0152No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE