Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group2_versus_Group3.MEP.mega_Pheno.cls #Group2_versus_Group3_repos
Phenotype	MEP.mega_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	1
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	0.19732335
Normalized Enrichment Score (NES)	0.8606266
Nominal p-value	0.75848305
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Olr1	180	0.675	0.0082	Yes
2	C1qc	319	0.596	0.0165	Yes
3	Casp4	423	0.559	0.0257	Yes
4	Ctsh	510	0.532	0.0351	Yes
5	Cr2	734	0.486	0.0361	Yes
6	Plaur	827	0.469	0.0436	Yes
7	Col4a2	830	0.468	0.0557	Yes
8	Clu	875	0.459	0.0653	Yes
9	Lcp2	988	0.441	0.0710	Yes
10	Notch4	1103	0.422	0.0760	Yes
11	Spock2	1153	0.418	0.0844	Yes
12	Plek	1178	0.415	0.0939	Yes
13	Tnfaip3	1239	0.409	0.1015	Yes
14	Cdk5r1	1447	0.389	0.1008	Yes
15	Prkcd	1644	0.370	0.1003	Yes
16	Anxa5	1660	0.368	0.1091	Yes
17	Kynu	1725	0.362	0.1152	Yes
18	Pclo	1738	0.361	0.1240	Yes
19	Pla2g7	1740	0.361	0.1333	Yes
20	Rasgrp1	1818	0.355	0.1385	Yes
21	Ctsc	1955	0.345	0.1404	Yes
22	Il6	2038	0.339	0.1450	Yes
23	Adam9	2070	0.336	0.1521	Yes
24	F5	2080	0.335	0.1604	Yes
25	Fn1	2100	0.332	0.1681	Yes
26	Hspa1a	2123	0.331	0.1755	Yes
27	Kif2a	2159	0.330	0.1823	Yes
28	Gp1ba	2163	0.330	0.1908	Yes
29	Itgam	2201	0.326	0.1973	Yes
30	Lamp2	2559	0.301	0.1865	No
31	Jak2	2590	0.299	0.1928	No
32	Cp	2732	0.288	0.1929	No
33	Pim1	2968	0.272	0.1877	No
34	Lyn	3367	0.247	0.1734	No
35	Cd46	3438	0.243	0.1761	No
36	Zfpm2	3562	0.236	0.1758	No
37	Serpinb2	3679	0.230	0.1757	No
38	Pcsk9	3755	0.226	0.1777	No
39	Src	4336	0.198	0.1526	No
40	Raf1	4446	0.192	0.1519	No
41	Stx4a	4476	0.190	0.1553	No
42	Dock9	4553	0.186	0.1562	No
43	Lta4h	4590	0.184	0.1591	No
44	Maff	4592	0.184	0.1638	No
45	Rbsn	4705	0.179	0.1627	No
46	Sirt6	4872	0.172	0.1585	No
47	Vcpip1	4893	0.172	0.1619	No
48	F10	5015	0.166	0.1599	No
49	Psen1	5168	0.160	0.1562	No
50	S100a13	5189	0.159	0.1593	No
51	Cpq	5481	0.147	0.1479	No
52	Gp9	5594	0.142	0.1458	No
53	Dgkg	5641	0.140	0.1470	No
54	Cfb	6023	0.123	0.1303	No
55	Kcnip2	6044	0.122	0.1325	No
56	Sh2b3	6061	0.121	0.1348	No
57	Pik3ca	6221	0.114	0.1295	No
58	Usp8	6377	0.108	0.1242	No
59	Prep	6517	0.103	0.1196	No
60	L3mbtl4	6529	0.102	0.1217	No
61	Usp15	6650	0.098	0.1180	No
62	Msrb1	7242	0.074	0.0890	No
63	Lgmn	7255	0.073	0.0903	No
64	Lck	7264	0.073	0.0918	No
65	S100a9	7594	0.061	0.0762	No
66	Cblb	7716	0.057	0.0714	No
67	Lrp1	7769	0.055	0.0701	No
68	Xpnpep1	7935	0.049	0.0627	No
69	F7	7937	0.049	0.0639	No
70	Gnai3	7984	0.046	0.0627	No
71	Fyn	8410	0.030	0.0413	No
72	Prcp	8570	0.025	0.0337	No
73	Ctss	8614	0.023	0.0320	No
74	Gmfb	8680	0.020	0.0291	No
75	Ppp4c	8816	0.015	0.0225	No
76	Dgkh	8921	0.012	0.0174	No
77	Cd36	9162	0.003	0.0049	No
78	Ltf	9236	0.000	0.0011	No
79	Gnai2	9373	-0.003	-0.0059	No
80	Pla2g4a	9555	-0.010	-0.0151	No
81	Gzmb	9629	-0.012	-0.0186	No
82	Lgals3	9702	-0.014	-0.0220	No
83	Cdh13	9751	-0.015	-0.0241	No
84	Plscr1	9824	-0.018	-0.0274	No
85	Irf1	10147	-0.031	-0.0434	No
86	Cda	10253	-0.035	-0.0480	No
87	Usp16	10270	-0.035	-0.0479	No
88	Lap3	10287	-0.036	-0.0478	No
89	Was	10528	-0.046	-0.0591	No
90	Zeb1	10559	-0.047	-0.0595	No
91	Usp14	10584	-0.048	-0.0595	No
92	Irf7	10723	-0.053	-0.0653	No
93	Dpp4	10907	-0.060	-0.0733	No
94	Ehd1	10929	-0.061	-0.0728	No
95	Fcer1g	11431	-0.080	-0.0969	No
96	Casp3	11534	-0.084	-0.1000	No
97	Ctsb	11552	-0.085	-0.0987	No
98	Gpd2	11592	-0.086	-0.0985	No
99	Gca	11655	-0.089	-0.0994	No
100	Akap10	11668	-0.089	-0.0977	No
101	Kcnip3	11698	-0.091	-0.0969	No
102	Casp1	11844	-0.097	-0.1019	No
103	Hspa5	11927	-0.101	-0.1035	No
104	Serpinc1	12132	-0.110	-0.1113	No
105	Gng2	12150	-0.111	-0.1093	No
106	Klkb1	12390	-0.120	-0.1187	No
107	C2	12425	-0.121	-0.1173	No
108	Psmb9	12672	-0.133	-0.1267	No
109	Mmp14	12737	-0.136	-0.1265	No
110	Ctsd	12747	-0.136	-0.1234	No
111	Dock10	12822	-0.139	-0.1237	No
112	Hnf4a	13098	-0.152	-0.1341	No
113	Cebpb	13106	-0.152	-0.1305	No
114	Ctso	13155	-0.154	-0.1290	No
115	Csrp1	13343	-0.161	-0.1345	No
116	Grb2	13356	-0.162	-0.1309	No
117	F2	13615	-0.174	-0.1399	No
118	Tmprss6	13740	-0.179	-0.1417	No
119	Rnf4	13846	-0.184	-0.1424	No
120	Dusp6	13981	-0.190	-0.1444	No
121	Pik3cg	14011	-0.191	-0.1410	No
122	Calm3	14136	-0.197	-0.1423	No
123	Lipa	14240	-0.203	-0.1424	No
124	Car2	14241	-0.203	-0.1371	No
125	C3	14319	-0.206	-0.1357	No
126	Fcnb	14608	-0.221	-0.1450	No
127	Brpf3	14777	-0.230	-0.1478	No
128	Pik3r5	14932	-0.238	-0.1496	No
129	Rabif	15129	-0.248	-0.1534	No
130	Fdx1	15351	-0.261	-0.1581	No
131	Casp7	15719	-0.281	-0.1699	No
132	Rhog	15781	-0.285	-0.1657	No
133	Irf2	15987	-0.301	-0.1686	No
134	Casp9	16059	-0.306	-0.1643	No
135	Tfpi2	16193	-0.314	-0.1630	No
136	Dyrk2	16230	-0.317	-0.1567	No
137	Dock4	16314	-0.323	-0.1526	No
138	Gnb4	16421	-0.330	-0.1495	No
139	Cpm	16561	-0.338	-0.1480	No
140	Mmp15	16734	-0.350	-0.1478	No
141	Prdm4	16754	-0.352	-0.1396	No
142	Gnb2	16756	-0.352	-0.1305	No
143	Me1	16951	-0.367	-0.1311	No
144	Prss36	16991	-0.371	-0.1235	No
145	Dusp5	16998	-0.372	-0.1141	No
146	Ccl5	17185	-0.388	-0.1137	No
147	Atox1	17289	-0.397	-0.1087	No
148	Pfn1	17412	-0.406	-0.1045	No
149	Calm1	17464	-0.411	-0.0964	No
150	Pdp1	17495	-0.412	-0.0872	No
151	Plg	17660	-0.428	-0.0846	No
152	Pdgfb	17675	-0.430	-0.0742	No
153	Actn2	17725	-0.435	-0.0654	No
154	Gzmk	17787	-0.440	-0.0571	No
155	Rce1	18016	-0.469	-0.0568	No
156	Gata3	18182	-0.494	-0.0525	No
157	Ppp2cb	18257	-0.504	-0.0432	No
158	F8	18287	-0.511	-0.0314	No
159	Ctsl	18390	-0.531	-0.0229	No
160	Gngt2	18630	-0.582	-0.0202	No
161	Timp2	19275	-1.048	-0.0265	No
162	Phex	19284	-1.079	0.0012	No