Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group2_versus_Group3.MEP.mega_Pheno.cls #Group2_versus_Group3_repos
Phenotype	MEP.mega_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.2184418
Normalized Enrichment Score (NES)	-0.9880023
Nominal p-value	0.4625984
FDR q-value	0.7847107
FWER p-Value	0.992

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ccnd3	383	0.572	-0.0027	No
2	Itk	487	0.538	0.0082	No
3	Prkcg	574	0.520	0.0195	No
4	Il11	715	0.492	0.0271	No
5	Ets1	801	0.474	0.0370	No
6	Lcp2	988	0.441	0.0406	No
7	Fgr	1040	0.432	0.0510	No
8	Tlr1	1436	0.390	0.0422	No
9	Ncr1	1744	0.361	0.0371	No
10	Crtam	1826	0.354	0.0436	No
11	Acvr2a	1930	0.347	0.0487	No
12	Abi1	1991	0.343	0.0559	No
13	Il6	2038	0.339	0.0638	No
14	Cd1d2	2224	0.324	0.0640	No
15	Eif3a	2325	0.316	0.0683	No
16	Ikbkb	2336	0.316	0.0773	No
17	Galnt1	2382	0.312	0.0844	No
18	Mrpl3	2465	0.307	0.0895	No
19	Jak2	2590	0.299	0.0920	No
20	Trat1	2655	0.294	0.0976	No
21	Tgfb2	2892	0.276	0.0936	No
22	Il1b	3038	0.268	0.0942	No
23	Akt1	3226	0.256	0.0922	No
24	Lyn	3367	0.247	0.0923	No
25	Socs5	3496	0.240	0.0929	No
26	Icam1	3576	0.235	0.0959	No
27	Cd40	3591	0.235	0.1023	No
28	Abce1	3674	0.230	0.1050	No
29	Il4	3791	0.224	0.1057	No
30	Prkcb	4186	0.205	0.0913	No
31	Dyrk3	4442	0.192	0.0838	No
32	Ube2d1	4455	0.191	0.0890	No
33	Il18rap	4567	0.185	0.0888	No
34	Tpd52	4606	0.183	0.0924	No
35	Stab1	5042	0.164	0.0746	No
36	Gcnt1	5159	0.160	0.0734	No
37	Brca1	5208	0.158	0.0757	No
38	Il4ra	5289	0.155	0.0763	No
39	Cd4	5300	0.154	0.0804	No
40	Il27ra	5502	0.146	0.0743	No
41	Psmb10	5534	0.145	0.0771	No
42	Flna	5553	0.144	0.0805	No
43	Ache	5592	0.142	0.0828	No
44	Hcls1	5869	0.131	0.0724	No
45	Cd28	5928	0.128	0.0732	No
46	Ccr1	6088	0.120	0.0686	No
47	Map3k7	6266	0.113	0.0627	No
48	Eif4g3	6393	0.108	0.0594	No
49	Tapbp	6449	0.105	0.0597	No
50	Eif3j1	6764	0.093	0.0462	No
51	Traf2	7174	0.077	0.0271	No
52	Lck	7264	0.073	0.0247	No
53	Icosl	7308	0.072	0.0246	No
54	Ube2n	7752	0.055	0.0032	No
55	Tap2	7808	0.053	0.0019	No
56	H2-DMb2	7895	0.050	-0.0010	No
57	Cd47	8016	0.045	-0.0059	No
58	Map4k1	8026	0.044	-0.0051	No
59	Il18	8027	0.044	-0.0037	No
60	Glmn	8345	0.033	-0.0193	No
61	Nck1	8456	0.028	-0.0242	No
62	Spi1	8487	0.027	-0.0249	No
63	Stat4	8560	0.025	-0.0279	No
64	Ctss	8614	0.023	-0.0300	No
65	Mtif2	8706	0.020	-0.0341	No
66	Ly86	8947	0.011	-0.0463	No
67	Ptprc	9031	0.008	-0.0504	No
68	Il7	9128	0.004	-0.0553	No
69	Il10	9462	-0.006	-0.0725	No
70	Csf1	9596	-0.011	-0.0791	No
71	Gzmb	9629	-0.012	-0.0804	No
72	Tlr6	9845	-0.019	-0.0911	No
73	Hif1a	9889	-0.021	-0.0927	No
74	Bcl3	9938	-0.023	-0.0945	No
75	Ifngr1	10182	-0.032	-0.1062	No
76	H2-Ob	10489	-0.045	-0.1208	No
77	Was	10528	-0.046	-0.1214	No
78	Ltb	10586	-0.048	-0.1229	No
79	Irf7	10723	-0.053	-0.1284	No
80	Apbb1	10898	-0.060	-0.1357	No
81	Cd247	11050	-0.066	-0.1416	No
82	Wars1	11062	-0.066	-0.1401	No
83	Cd80	11139	-0.070	-0.1420	No
84	Stat1	11267	-0.074	-0.1464	No
85	Ncf4	11506	-0.083	-0.1563	No
86	Itgal	11569	-0.085	-0.1569	No
87	Il12a	11735	-0.092	-0.1628	No
88	Bcl10	11818	-0.096	-0.1641	No
89	Cfp	12067	-0.107	-0.1738	No
90	Cd74	12368	-0.119	-0.1859	No
91	Srgn	12383	-0.119	-0.1830	No
92	C2	12425	-0.121	-0.1815	No
93	Ccr2	12533	-0.126	-0.1832	No
94	Npm1	12534	-0.127	-0.1794	No
95	Degs1	12900	-0.142	-0.1941	No
96	Rps3a1	12909	-0.143	-0.1902	No
97	Ptpn6	12916	-0.144	-0.1862	No
98	Cd86	13270	-0.159	-0.1998	No
99	Csk	13337	-0.161	-0.1984	No
100	Igsf6	13411	-0.164	-0.1972	No
101	Thy1	13446	-0.165	-0.1940	No
102	Gpr65	13452	-0.165	-0.1893	No
103	F2	13615	-0.174	-0.1925	No
104	Tgfb1	13699	-0.178	-0.1914	No
105	Elane	13992	-0.190	-0.2009	No
106	Socs1	14228	-0.202	-0.2070	No
107	Itgb2	14331	-0.207	-0.2061	No
108	Fas	14366	-0.209	-0.2015	No
109	Rpl9	14524	-0.216	-0.2032	No
110	Elf4	14625	-0.222	-0.2017	No
111	Nme1	14860	-0.234	-0.2068	No
112	Nlrp3	15084	-0.246	-0.2110	Yes
113	Bcat1	15172	-0.251	-0.2079	Yes
114	Tlr3	15211	-0.255	-0.2022	Yes
115	Ly75	15332	-0.260	-0.2006	Yes
116	F2r	15459	-0.267	-0.1991	Yes
117	B2m	15708	-0.280	-0.2035	Yes
118	Rps9	15782	-0.285	-0.1987	Yes
119	Ifnar2	15865	-0.291	-0.1942	Yes
120	Tap1	15972	-0.300	-0.1907	Yes
121	Eif3d	15976	-0.300	-0.1817	Yes
122	Tlr2	16173	-0.313	-0.1825	Yes
123	H2-DMa	16363	-0.326	-0.1825	Yes
124	Ifngr2	16787	-0.354	-0.1938	Yes
125	Il15	16799	-0.355	-0.1837	Yes
126	Cd96	16859	-0.360	-0.1759	Yes
127	Cd79a	16910	-0.364	-0.1675	Yes
128	Capg	16981	-0.370	-0.1599	Yes
129	Ccnd2	17002	-0.372	-0.1497	Yes
130	Fcgr2b	17021	-0.374	-0.1393	Yes
131	Il12rb1	17057	-0.377	-0.1297	Yes
132	Pf4	17061	-0.377	-0.1184	Yes
133	Eif5a	17116	-0.382	-0.1097	Yes
134	Il2rg	17153	-0.385	-0.0999	Yes
135	H2-Aa	17161	-0.386	-0.0886	Yes
136	Ccl5	17185	-0.388	-0.0780	Yes
137	Ccr5	17346	-0.400	-0.0743	Yes
138	Il2	17615	-0.424	-0.0754	Yes
139	Il16	17688	-0.431	-0.0661	Yes
140	St8sia4	17821	-0.443	-0.0596	Yes
141	H2-Oa	18213	-0.498	-0.0649	Yes
142	Zap70	18370	-0.528	-0.0571	Yes
143	Hdac9	18552	-0.564	-0.0495	Yes
144	Cdkn2a	18755	-0.611	-0.0415	Yes
145	Ripk2	18837	-0.630	-0.0267	Yes
146	Irf8	19016	-0.716	-0.0143	Yes
147	Tnf	19253	-0.972	0.0028	Yes