DatasetMEP.MEP.mega_Pheno.cls
#Group1_versus_Group4.MEP.mega_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMEP.mega_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_PROTEIN_SECRETION
Enrichment Score (ES)0.12329854
Normalized Enrichment Score (NES)0.6395245
Nominal p-value0.939759
FDR q-value0.93560064
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PROTEIN_SECRETION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Zw103210.6700.0211Yes
2Lman17620.5390.0285Yes
3Galc7740.5370.0582Yes
4Atp6v1h10680.4890.0706Yes
5Arfgef219150.3840.0482Yes
6Golga422520.3570.0508Yes
7Dst23360.3510.0662Yes
8Atp1a125850.3320.0721Yes
9Sspn29150.3070.0723Yes
10Yipf631550.2930.0763Yes
11Copb131990.2900.0904Yes
12Pam33130.2800.1003Yes
13Copb233200.2800.1158Yes
14Sec31a34710.2720.1233Yes
15Napg43260.2260.0916No
16Vps4b47680.2010.0800No
17Uso148650.1960.0860No
18Cltc52550.1790.0759No
19Anp32e53180.1750.0825No
20Scrn155100.1650.0819No
21Gosr257800.1510.0764No
22Vamp459120.1440.0777No
23Stx759860.1400.0818No
24Tpd5260430.1370.0866No
25Cd6361430.1320.0889No
26Tmed1062650.1270.0898No
27Adam1070790.0970.0530No
28Arf173220.0850.0451No
29Ap3b174710.0790.0419No
30Rab22a76130.0720.0386No
31Ocrl76250.0710.0420No
32Ica176280.0710.0459No
33Clcn376330.0710.0497No
34Rps6ka376800.0690.0513No
35Gla77630.0650.0507No
36Atp7a77880.0640.0530No
37Mapk179150.0580.0497No
38Snx279820.0540.0493No
39Ap1g180300.0530.0498No
40Arcn181320.0490.0473No
41Stx1684590.0350.0323No
42Stx1284680.0350.0339No
43Ykt685490.0320.0315No
44Stam86600.0270.0273No
45Napa86660.0270.0286No
46Arfgef188350.0200.0210No
47Ap3s189120.0170.0180No
48Rab1490660.0100.0106No
49Sec22b90750.0100.0107No
50Tsg1019453-0.002-0.0088No
51Mon29551-0.005-0.0135No
52Tmx19941-0.023-0.0325No
53Sh3gl210036-0.029-0.0357No
54Sgms110061-0.030-0.0353No
55Bet110125-0.033-0.0367No
56Vps4510219-0.038-0.0395No
57Ap2m110377-0.043-0.0452No
58Kif1b10842-0.065-0.0657No
59Scamp111389-0.089-0.0891No
60Dnm1l11391-0.089-0.0842No
61Ap2b111882-0.111-0.1034No
62Rab5a12196-0.124-0.1127No
63Dop1a12316-0.129-0.1116No
64Cog212344-0.130-0.1057No
65Clta12643-0.142-0.1132No
66Arfgap312726-0.146-0.1092No
67Lamp212812-0.150-0.1052No
68Arfip112906-0.154-0.1013No
69Ppt113047-0.160-0.0996No
70Snap2313058-0.160-0.0911No
71Rab2a13141-0.164-0.0862No
72Ctsc13798-0.192-0.1095No
73Rab913799-0.192-0.0987No
74Gbf113804-0.192-0.0881No
75Vamp314067-0.206-0.0901No
76Cope14244-0.211-0.0874No
77Igf2r14256-0.212-0.0761No
78Bnip314561-0.229-0.0790No
79Cav215170-0.260-0.0960No
80Tom1l115414-0.275-0.0931No
81Cln515601-0.285-0.0868No
82Tspan815661-0.288-0.0736No
83M6pr15992-0.310-0.0733No
84Gnas16313-0.331-0.0713No
85Ergic316985-0.380-0.0848No
86Krt1817496-0.425-0.0874No
87Sod117704-0.442-0.0733No
88Scamp318006-0.484-0.0617No
89Sec24d18031-0.486-0.0355No
90Abca118549-0.575-0.0300No
91Ap2s118683-0.608-0.0027No
92Rer118732-0.6230.0299No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PROTEIN_SECRETION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PROTEIN_SECRETION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PROTEIN_SECRETION