Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group1_versus_Group4.MEP.mega_Pheno.cls #Group1_versus_Group4_repos
Phenotype	MEP.mega_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.26704055
Normalized Enrichment Score (NES)	-1.084425
Nominal p-value	0.3699187
FDR q-value	0.55347323
FWER p-Value	0.965

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	F7	166	0.773	0.0115	No
2	Cfb	672	0.560	-0.0003	No
3	Me1	965	0.504	-0.0024	No
4	Hspa5	1393	0.442	-0.0131	No
5	Gnai3	1409	0.440	-0.0024	No
6	Cda	1432	0.437	0.0078	No
7	Dusp6	1617	0.416	0.0091	No
8	Phex	1634	0.415	0.0191	No
9	Prep	1649	0.413	0.0291	No
10	Ppp2cb	1748	0.400	0.0344	No
11	Usp14	1827	0.393	0.0406	No
12	Rasgrp1	2247	0.357	0.0281	No
13	Dock9	2457	0.341	0.0260	No
14	Usp8	3046	0.300	0.0031	No
15	Pdgfb	3092	0.297	0.0085	No
16	Lap3	3164	0.293	0.0125	No
17	Gmfb	3238	0.287	0.0161	No
18	C3	3420	0.275	0.0139	No
19	Cebpb	3748	0.254	0.0034	No
20	Ctss	3902	0.245	0.0018	No
21	C2	3967	0.241	0.0048	No
22	Prss36	3976	0.240	0.0106	No
23	Hnf4a	4097	0.234	0.0105	No
24	Plek	4228	0.229	0.0096	No
25	Cdh13	4774	0.201	-0.0136	No
26	Rbsn	4864	0.196	-0.0131	No
27	Olr1	4945	0.192	-0.0123	No
28	Kynu	4978	0.190	-0.0090	No
29	Fn1	5084	0.185	-0.0096	No
30	Gca	5154	0.185	-0.0084	No
31	Grb2	5162	0.184	-0.0040	No
32	Pik3cg	5166	0.184	0.0007	No
33	Fdx1	5200	0.182	0.0037	No
34	Gzmk	5381	0.172	-0.0012	No
35	F10	5387	0.172	0.0030	No
36	Hspa1a	5571	0.162	-0.0023	No
37	Jak2	5755	0.152	-0.0079	No
38	Lrp1	5875	0.146	-0.0103	No
39	Raf1	5962	0.142	-0.0111	No
40	Fcer1g	6210	0.130	-0.0206	No
41	Vcpip1	6222	0.129	-0.0178	No
42	Pik3ca	6278	0.127	-0.0174	No
43	Tfpi2	6317	0.125	-0.0161	No
44	Usp16	6442	0.121	-0.0194	No
45	Tmprss6	6474	0.120	-0.0179	No
46	Pcsk9	6505	0.120	-0.0163	No
47	Ctsd	6642	0.118	-0.0204	No
48	Rnf4	6759	0.112	-0.0235	No
49	Ctsb	6794	0.110	-0.0224	No
50	Cblb	7293	0.087	-0.0462	No
51	Mmp14	7395	0.082	-0.0493	No
52	Usp15	7475	0.079	-0.0514	No
53	Brpf3	7565	0.074	-0.0541	No
54	Pik3r5	7816	0.062	-0.0655	No
55	Pim1	8173	0.047	-0.0829	No
56	Plscr1	8387	0.038	-0.0930	No
57	Dgkg	8397	0.038	-0.0925	No
58	C1qc	8415	0.037	-0.0925	No
59	Kif2a	8491	0.034	-0.0955	No
60	Sirt6	8620	0.029	-0.1014	No
61	Fyn	8639	0.028	-0.1016	No
62	Irf7	8668	0.027	-0.1024	No
63	Cd36	8771	0.023	-0.1071	No
64	Dyrk2	8881	0.018	-0.1124	No
65	Dgkh	9037	0.011	-0.1202	No
66	Cr2	9080	0.009	-0.1221	No
67	L3mbtl4	9107	0.008	-0.1233	No
68	Ltf	9307	0.000	-0.1337	No
69	Maff	9433	-0.001	-0.1402	No
70	Ppp4c	9448	-0.002	-0.1408	No
71	Lta4h	9470	-0.003	-0.1419	No
72	Psen1	9644	-0.009	-0.1507	No
73	Lck	10027	-0.029	-0.1699	No
74	Src	10172	-0.035	-0.1765	No
75	Lgals3	10328	-0.042	-0.1835	No
76	Plg	10331	-0.042	-0.1825	No
77	Prdm4	10350	-0.042	-0.1823	No
78	Cp	10411	-0.045	-0.1843	No
79	Casp7	10616	-0.053	-0.1936	No
80	Kcnip3	10628	-0.054	-0.1927	No
81	Gpd2	10999	-0.071	-0.2102	No
82	Xpnpep1	11067	-0.074	-0.2118	No
83	Stx4a	11073	-0.074	-0.2101	No
84	Was	11101	-0.075	-0.2095	No
85	Irf2	11414	-0.090	-0.2235	No
86	Gng2	11639	-0.100	-0.2326	No
87	Gp1ba	11666	-0.102	-0.2313	No
88	Timp2	11738	-0.105	-0.2323	No
89	Ehd1	11740	-0.105	-0.2296	No
90	Anxa5	11886	-0.112	-0.2343	No
91	Itgam	11937	-0.114	-0.2339	No
92	Lcp2	11949	-0.114	-0.2315	No
93	Dpp4	12310	-0.128	-0.2470	No
94	Lipa	12377	-0.131	-0.2470	No
95	Prcp	12430	-0.133	-0.2462	No
96	Pla2g4a	12485	-0.136	-0.2455	No
97	Casp9	12552	-0.139	-0.2454	No
98	F8	12715	-0.146	-0.2500	No
99	Lamp2	12812	-0.150	-0.2511	No
100	Akap10	12885	-0.153	-0.2509	No
101	F5	12943	-0.156	-0.2498	No
102	Msrb1	12969	-0.157	-0.2470	No
103	Serpinb2	13028	-0.159	-0.2459	No
104	Notch4	13190	-0.166	-0.2499	No
105	Gnai2	13250	-0.169	-0.2486	No
106	Gzmb	13253	-0.169	-0.2443	No
107	F2	13271	-0.170	-0.2408	No
108	Clu	13421	-0.175	-0.2440	No
109	Kcnip2	13440	-0.176	-0.2403	No
110	Rabif	13515	-0.180	-0.2395	No
111	Zfpm2	13542	-0.181	-0.2362	No
112	Casp4	13642	-0.185	-0.2365	No
113	Ctsc	13798	-0.192	-0.2396	No
114	Calm3	13836	-0.194	-0.2365	No
115	Cpq	13968	-0.200	-0.2381	No
116	Gata3	14000	-0.201	-0.2345	No
117	Ctsl	14046	-0.204	-0.2315	No
118	Ctsh	14293	-0.214	-0.2388	No
119	Prkcd	14544	-0.228	-0.2459	No
120	Cdk5r1	14576	-0.230	-0.2415	No
121	Pclo	14750	-0.239	-0.2443	No
122	Lyn	14980	-0.250	-0.2497	No
123	Casp3	15203	-0.263	-0.2545	No
124	Gp9	15212	-0.263	-0.2480	No
125	Cpm	15577	-0.283	-0.2597	Yes
126	Fcnb	15593	-0.285	-0.2530	Yes
127	Dusp5	15681	-0.289	-0.2500	Yes
128	Pdp1	15706	-0.290	-0.2437	Yes
129	Il6	15835	-0.298	-0.2426	Yes
130	Tnfaip3	16008	-0.311	-0.2434	Yes
131	Car2	16199	-0.323	-0.2449	Yes
132	Zeb1	16242	-0.326	-0.2386	Yes
133	Lgmn	16409	-0.337	-0.2385	Yes
134	Spock2	16456	-0.340	-0.2321	Yes
135	Calm1	16635	-0.353	-0.2321	Yes
136	Col4a2	16703	-0.358	-0.2263	Yes
137	Rce1	16819	-0.367	-0.2227	Yes
138	Mmp15	16972	-0.379	-0.2208	Yes
139	Psmb9	16988	-0.380	-0.2117	Yes
140	Pfn1	17092	-0.391	-0.2068	Yes
141	Sh2b3	17132	-0.395	-0.1986	Yes
142	Ccl5	17233	-0.403	-0.1933	Yes
143	Pla2g7	17364	-0.415	-0.1893	Yes
144	S100a9	17369	-0.415	-0.1787	Yes
145	Dock4	17523	-0.427	-0.1755	Yes
146	Irf1	17594	-0.433	-0.1678	Yes
147	Csrp1	17705	-0.442	-0.1620	Yes
148	Cd46	17797	-0.454	-0.1550	Yes
149	Gnb2	17799	-0.454	-0.1432	Yes
150	Adam9	17961	-0.477	-0.1391	Yes
151	Dock10	18061	-0.491	-0.1315	Yes
152	Casp1	18083	-0.494	-0.1197	Yes
153	S100a13	18119	-0.500	-0.1085	Yes
154	Gngt2	18250	-0.521	-0.1017	Yes
155	Serpinc1	18512	-0.569	-0.1005	Yes
156	Gnb4	18547	-0.575	-0.0872	Yes
157	Ctso	18879	-0.666	-0.0871	Yes
158	Klkb1	18889	-0.669	-0.0702	Yes
159	Plaur	19010	-0.726	-0.0575	Yes
160	Actn2	19171	-0.854	-0.0435	Yes
161	Rhog	19235	-0.953	-0.0220	Yes
162	Atox1	19256	-0.984	0.0027	Yes