Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group1_versus_Group4.MEP.mega_Pheno.cls #Group1_versus_Group4_repos
Phenotype	MEP.mega_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.29752034
Normalized Enrichment Score (NES)	-1.2959136
Nominal p-value	0.07172131
FDR q-value	0.46986863
FWER p-Value	0.773

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Prkcb	105	0.832	0.0152	No
2	F2r	448	0.619	0.0127	No
3	Itk	478	0.611	0.0263	No
4	Cd4	495	0.607	0.0405	No
5	Il11	518	0.599	0.0542	No
6	Apbb1	559	0.589	0.0668	No
7	Il4	610	0.577	0.0785	No
8	Nlrp3	829	0.526	0.0801	No
9	Brca1	962	0.505	0.0858	No
10	Hdac9	1598	0.419	0.0630	No
11	Zap70	2071	0.369	0.0475	No
12	Eif3a	2171	0.363	0.0514	No
13	Elane	2472	0.339	0.0441	No
14	Il10	2678	0.327	0.0416	No
15	Hif1a	2797	0.316	0.0432	No
16	Cd28	2815	0.315	0.0502	No
17	Stab1	2849	0.312	0.0562	No
18	Traf2	3016	0.302	0.0550	No
19	Abce1	3123	0.295	0.0568	No
20	Socs5	3270	0.284	0.0562	No
21	Tnf	3294	0.282	0.0620	No
22	Tgfb2	3301	0.281	0.0687	No
23	Galnt1	3423	0.275	0.0692	No
24	Ets1	3895	0.245	0.0507	No
25	Ctss	3902	0.245	0.0565	No
26	C2	3967	0.241	0.0591	No
27	Nck1	4235	0.229	0.0508	No
28	Map4k1	4458	0.218	0.0447	No
29	Ube2n	4575	0.211	0.0438	No
30	Il12a	4827	0.198	0.0356	No
31	Ache	5045	0.188	0.0290	No
32	Glmn	5070	0.186	0.0323	No
33	Akt1	5369	0.173	0.0211	No
34	Jak2	5755	0.152	0.0047	No
35	St8sia4	5928	0.143	-0.0007	No
36	Tpd52	6043	0.137	-0.0032	No
37	Il4ra	6071	0.136	-0.0013	No
38	Cd80	6220	0.130	-0.0058	No
39	Cd86	6393	0.123	-0.0117	No
40	Hcls1	6633	0.118	-0.0212	No
41	Eif4g3	6737	0.113	-0.0238	No
42	Mrpl3	6835	0.108	-0.0262	No
43	Wars1	6993	0.101	-0.0319	No
44	Igsf6	7155	0.093	-0.0380	No
45	Ccr5	7445	0.079	-0.0511	No
46	Fgr	7687	0.069	-0.0620	No
47	Ripk2	7971	0.055	-0.0754	No
48	Csf1	7978	0.054	-0.0743	No
49	Trat1	8151	0.048	-0.0821	No
50	Csk	8242	0.042	-0.0858	No
51	Ly86	8317	0.040	-0.0886	No
52	Irf7	8668	0.027	-0.1062	No
53	Map3k7	9008	0.013	-0.1236	No
54	Bcat1	9079	0.010	-0.1270	No
55	Degs1	9653	-0.010	-0.1567	No
56	Ncf4	9758	-0.014	-0.1618	No
57	Il1b	9946	-0.023	-0.1710	No
58	Lck	10027	-0.029	-0.1744	No
59	Il18rap	10106	-0.032	-0.1777	No
60	Ccr1	10169	-0.035	-0.1801	No
61	Ube2d1	10232	-0.038	-0.1824	No
62	Ikbkb	10349	-0.042	-0.1874	No
63	Eif3j1	10379	-0.043	-0.1878	No
64	H2-Aa	10385	-0.044	-0.1870	No
65	Cdkn2a	10583	-0.052	-0.1960	No
66	Capg	10838	-0.064	-0.2076	No
67	Nme1	10990	-0.071	-0.2138	No
68	Stat1	11045	-0.073	-0.2148	No
69	Flna	11081	-0.075	-0.2148	No
70	Was	11101	-0.075	-0.2139	No
71	Ccnd2	11143	-0.077	-0.2141	No
72	Abi1	11627	-0.099	-0.2369	No
73	Socs1	11883	-0.111	-0.2474	No
74	Gcnt1	11902	-0.112	-0.2456	No
75	Lcp2	11949	-0.114	-0.2452	No
76	Il18	12162	-0.123	-0.2532	No
77	Tapbp	12176	-0.123	-0.2508	No
78	Ccr2	12637	-0.142	-0.2713	No
79	Crtam	12749	-0.147	-0.2734	No
80	Stat4	12787	-0.149	-0.2717	No
81	Il15	12886	-0.153	-0.2730	No
82	Il7	13011	-0.158	-0.2755	No
83	Il2	13156	-0.164	-0.2790	No
84	Il27ra	13175	-0.166	-0.2758	No
85	Gzmb	13253	-0.169	-0.2756	No
86	F2	13271	-0.170	-0.2723	No
87	Tap2	13395	-0.174	-0.2744	No
88	Cd47	13423	-0.175	-0.2715	No
89	Pf4	13483	-0.178	-0.2701	No
90	Elf4	13577	-0.182	-0.2705	No
91	Psmb10	13822	-0.193	-0.2784	No
92	Cd247	13894	-0.196	-0.2773	No
93	Eif3d	13903	-0.197	-0.2728	No
94	Ifngr2	14066	-0.206	-0.2762	No
95	Prkcg	14260	-0.212	-0.2810	No
96	Acvr2a	14285	-0.213	-0.2769	No
97	Irf8	14343	-0.216	-0.2745	No
98	Itgb2	14606	-0.231	-0.2825	No
99	Cd1d2	14895	-0.247	-0.2914	Yes
100	Cd79a	14905	-0.247	-0.2857	Yes
101	Lyn	14980	-0.250	-0.2834	Yes
102	Ly75	15162	-0.260	-0.2864	Yes
103	H2-Oa	15282	-0.268	-0.2859	Yes
104	Fcgr2b	15356	-0.272	-0.2830	Yes
105	H2-Ob	15380	-0.273	-0.2774	Yes
106	Il12rb1	15586	-0.284	-0.2811	Yes
107	Tlr3	15624	-0.286	-0.2759	Yes
108	Spi1	15684	-0.290	-0.2718	Yes
109	Il6	15835	-0.298	-0.2722	Yes
110	Ptpn6	15892	-0.302	-0.2677	Yes
111	Bcl3	15930	-0.305	-0.2620	Yes
112	Cd74	15966	-0.308	-0.2562	Yes
113	Il16	16069	-0.315	-0.2537	Yes
114	Cd40	16099	-0.317	-0.2473	Yes
115	Ncr1	16163	-0.321	-0.2427	Yes
116	Thy1	16224	-0.325	-0.2377	Yes
117	Tgfb1	16301	-0.329	-0.2335	Yes
118	Mtif2	16382	-0.336	-0.2294	Yes
119	Itgal	16700	-0.358	-0.2371	Yes
120	Gpr65	16719	-0.359	-0.2291	Yes
121	Ptprc	16722	-0.360	-0.2203	Yes
122	Bcl10	16795	-0.365	-0.2150	Yes
123	Icosl	16933	-0.376	-0.2128	Yes
124	Cd96	17000	-0.381	-0.2068	Yes
125	Ltb	17045	-0.386	-0.1995	Yes
126	Fas	17219	-0.401	-0.1986	Yes
127	Ccl5	17233	-0.403	-0.1893	Yes
128	H2-DMa	17293	-0.408	-0.1823	Yes
129	Tap1	17323	-0.411	-0.1736	Yes
130	Tlr2	17593	-0.433	-0.1769	Yes
131	Rpl9	17779	-0.451	-0.1754	Yes
132	Rps3a1	17849	-0.461	-0.1675	Yes
133	Eif5a	17935	-0.473	-0.1602	Yes
134	Il2rg	18205	-0.512	-0.1616	Yes
135	Cfp	18443	-0.557	-0.1601	Yes
136	Tlr6	18620	-0.593	-0.1546	Yes
137	Npm1	18649	-0.600	-0.1412	Yes
138	Ifngr1	18658	-0.603	-0.1266	Yes
139	Ifnar2	18823	-0.651	-0.1190	Yes
140	Tlr1	18837	-0.654	-0.1035	Yes
141	Rps9	18844	-0.656	-0.0875	Yes
142	Ccnd3	18873	-0.663	-0.0726	Yes
143	Srgn	18948	-0.692	-0.0593	Yes
144	H2-DMb2	18985	-0.714	-0.0434	Yes
145	Dyrk3	19046	-0.749	-0.0280	Yes
146	B2m	19086	-0.778	-0.0107	Yes
147	Icam1	19206	-0.896	0.0053	Yes