DatasetMEP.MEP.mega_Pheno.cls
#Group1_versus_Group3.MEP.mega_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeMEP.mega_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.4102544
Normalized Enrichment Score (NES)-1.3824631
Nominal p-value0.17540322
FDR q-value0.8401433
FWER p-Value0.687
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ndufs31420.7130.0071No
2Pdhx7340.492-0.0138No
3Mgst37450.491-0.0043No
4Dld8280.4800.0012No
5Alas111640.429-0.0076No
6Lrpprc16470.376-0.0251No
7Hccs18140.362-0.0264No
8Mrps1220000.344-0.0291No
9Hspa922250.327-0.0341No
10Afg3l223330.318-0.0332No
11Atp6v1d23560.316-0.0279No
12Oat23870.315-0.0231No
13Atp6v1h26230.300-0.0293No
14Grpel128780.282-0.0368No
15Mfn229220.279-0.0333No
16Acadm30970.269-0.0370No
17Mtrf132990.256-0.0423No
18Fh133060.255-0.0374No
19Sucla234580.246-0.0403No
20Ndufb536200.237-0.0438No
21Mtrr37480.231-0.0458No
22Slc25a2037830.230-0.0429No
23Cyb5a38010.228-0.0391No
24Ndufa538870.224-0.0390No
25Cpt1a39470.220-0.0376No
26Gpx440530.214-0.0387No
27Hadhb40930.211-0.0365No
28Phyh44600.192-0.0517No
29Mpc145920.186-0.0547No
30Atp6v0c49230.171-0.0685No
31Pmpca50080.168-0.0695No
32Rhot151510.162-0.0736No
33Pdha160590.125-0.1185No
34Supv3l161590.121-0.1212No
35Ech162970.118-0.1259No
36Atp1b163030.118-0.1238No
37Gpi163720.115-0.1250No
38Prdx366200.105-0.1358No
39Idh168730.095-0.1470No
40Slc25a1270360.089-0.1537No
41Atp6v1c171240.086-0.1565No
42Acadvl71510.085-0.1561No
43Opa174230.074-0.1687No
44Tomm70a77170.062-0.1828No
45Slc25a1179200.055-0.1922No
46Bckdha79280.055-0.1915No
47Glud179920.053-0.1937No
48Iscu80150.052-0.1938No
49Ogdh80490.050-0.1945No
50Vdac383220.040-0.2079No
51Dlat87400.023-0.2292No
52Idh289490.016-0.2398No
53Vdac189560.016-0.2398No
54Hadha92090.007-0.2528No
55Dlst93140.003-0.2582No
56Immt9472-0.000-0.2664No
57Ndufs19606-0.005-0.2732No
58Cox109629-0.006-0.2743No
59Uqcrc110020-0.022-0.2942No
60Pdhb10079-0.024-0.2967No
61Atp6v0e10178-0.028-0.3013No
62Aco210300-0.031-0.3070No
63Cyb5r310301-0.031-0.3064No
64Casp710316-0.032-0.3064No
65Timm1010374-0.034-0.3087No
66Idh3g10441-0.036-0.3115No
67Polr2f10506-0.039-0.3140No
68Cox1510587-0.042-0.3173No
69Mrpl1110671-0.046-0.3207No
70Mdh110761-0.049-0.3244No
71Mrpl1511003-0.058-0.3358No
72Abcb711356-0.072-0.3528No
73Pdk411426-0.075-0.3548No
74Ndufs611454-0.076-0.3547No
75Cox7a2l11562-0.081-0.3586No
76Ndufa711804-0.090-0.3694No
77Mrps3011834-0.091-0.3691No
78Idh3a11951-0.096-0.3732No
79Acat111979-0.098-0.3726No
80Ndufb211982-0.098-0.3707No
81Tcirg112212-0.107-0.3805No
82Etfa12278-0.110-0.3817No
83Surf112408-0.115-0.3860No
84Ndufa412444-0.117-0.3855No
85Bax12449-0.117-0.3833No
86Ndufa912759-0.130-0.3968No
87Fdx112767-0.131-0.3945No
88Oxa1l12881-0.136-0.3976No
89Sdha12883-0.136-0.3949No
90Cox1712930-0.139-0.3945No
91Acaa1a12976-0.141-0.3940No
92Etfdh13128-0.148-0.3988No
93Sdhd13129-0.148-0.3958No
94Aldh6a113255-0.155-0.3992No
95Nnt13351-0.160-0.4009No
96Ndufb713435-0.164-0.4019No
97Uqcrq13535-0.168-0.4037No
98Htra213626-0.172-0.4049No
99Bdh213646-0.173-0.4023No
100Decr113681-0.175-0.4005No
101Aifm113842-0.184-0.4051No
102Mtx213856-0.184-0.4021No
103Rhot213910-0.187-0.4010No
104Cox8a13916-0.187-0.3975No
105Atp6v0b14029-0.192-0.3994No
106Atp6v1e114075-0.195-0.3978No
107Cox1114098-0.196-0.3949No
108Timm914136-0.198-0.3929No
109Mdh214415-0.211-0.4031No
110Echs114419-0.212-0.3989No
111Atp6v1g114598-0.220-0.4037No
112Ndufs414626-0.222-0.4006No
113Por14811-0.233-0.4055Yes
114Slc25a414856-0.234-0.4030Yes
115Cox5a14870-0.235-0.3989Yes
116Retsat14882-0.236-0.3947Yes
117Ldha14926-0.238-0.3921Yes
118Vdac215030-0.244-0.3925Yes
119Ndufv215038-0.244-0.3879Yes
120Ndufs815304-0.257-0.3965Yes
121Ndufab115428-0.264-0.3975Yes
122Ndufb815510-0.268-0.3963Yes
123Mrps2215572-0.270-0.3940Yes
124Suclg115721-0.279-0.3960Yes
125Fxn15731-0.280-0.3908Yes
126Mrps1115738-0.280-0.3854Yes
127Ndufa115897-0.290-0.3877Yes
128Sdhb15983-0.296-0.3861Yes
129Atp6v1f15996-0.298-0.3807Yes
130Ndufc216046-0.303-0.3771Yes
131Ndufb616052-0.303-0.3712Yes
132Ndufa616074-0.305-0.3661Yes
133Timm8b16257-0.317-0.3691Yes
134Uqcrc216522-0.338-0.3760Yes
135Etfb16558-0.340-0.3709Yes
136Pdp116657-0.350-0.3689Yes
137Got216692-0.353-0.3635Yes
138Acaa216724-0.355-0.3579Yes
139Cox7a216735-0.356-0.3512Yes
140Cox6c16753-0.358-0.3448Yes
141Slc25a516805-0.362-0.3401Yes
142Cox7b16816-0.363-0.3332Yes
143Cyc116850-0.366-0.3275Yes
144Uqcr1016876-0.368-0.3213Yes
145Timm1316955-0.375-0.3177Yes
146Atp6ap117433-0.421-0.3341Yes
147Acadsb17444-0.422-0.3260Yes
148Mrpl3417721-0.448-0.3313Yes
149Slc25a317776-0.453-0.3249Yes
150Cox5b17808-0.459-0.3172Yes
151Eci117810-0.459-0.3079Yes
152Idh3b17828-0.461-0.2994Yes
153Tomm2217857-0.463-0.2914Yes
154Cox6b117936-0.471-0.2859Yes
155Cs18115-0.492-0.2851Yes
156Ndufs218233-0.509-0.2809Yes
157Cox4i118237-0.510-0.2706Yes
158Ndufb318258-0.515-0.2612Yes
159Ndufs718261-0.515-0.2508Yes
160Uqcrfs118272-0.516-0.2408Yes
161Atp5pb18429-0.547-0.2378Yes
162Hsd17b1018472-0.555-0.2287Yes
163Cox7c18510-0.565-0.2191Yes
164Timm17a18526-0.569-0.2083Yes
165Ndufa318637-0.593-0.2020Yes
166Sdhc18672-0.599-0.1916Yes
167Ndufv118802-0.638-0.1853Yes
168Uqcrh18805-0.638-0.1724Yes
169Phb218814-0.641-0.1598Yes
170Ndufc118895-0.666-0.1504Yes
171Mrps1518897-0.667-0.1368Yes
172Ndufa218899-0.668-0.1233Yes
173Cox6a118991-0.710-0.1136Yes
174Uqcr1119096-0.773-0.1032Yes
175Ndufa819107-0.781-0.0879Yes
176Mrpl3519131-0.808-0.0726Yes
177Nqo219237-0.950-0.0587Yes
178Timm5019246-0.957-0.0396Yes
179Ldhb19250-0.974-0.0200Yes
180Uqcrb19280-1.1230.0014Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION