| Dataset | MEP.MEP.mega_Pheno.cls #Group1_versus_Group3.MEP.mega_Pheno.cls #Group1_versus_Group3_repos |
| Phenotype | MEP.mega_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_OXIDATIVE_PHOSPHORYLATION |
| Enrichment Score (ES) | -0.4102544 |
| Normalized Enrichment Score (NES) | -1.3824631 |
| Nominal p-value | 0.17540322 |
| FDR q-value | 0.8401433 |
| FWER p-Value | 0.687 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Ndufs3 | 142 | 0.713 | 0.0071 | No |
| 2 | Pdhx | 734 | 0.492 | -0.0138 | No |
| 3 | Mgst3 | 745 | 0.491 | -0.0043 | No |
| 4 | Dld | 828 | 0.480 | 0.0012 | No |
| 5 | Alas1 | 1164 | 0.429 | -0.0076 | No |
| 6 | Lrpprc | 1647 | 0.376 | -0.0251 | No |
| 7 | Hccs | 1814 | 0.362 | -0.0264 | No |
| 8 | Mrps12 | 2000 | 0.344 | -0.0291 | No |
| 9 | Hspa9 | 2225 | 0.327 | -0.0341 | No |
| 10 | Afg3l2 | 2333 | 0.318 | -0.0332 | No |
| 11 | Atp6v1d | 2356 | 0.316 | -0.0279 | No |
| 12 | Oat | 2387 | 0.315 | -0.0231 | No |
| 13 | Atp6v1h | 2623 | 0.300 | -0.0293 | No |
| 14 | Grpel1 | 2878 | 0.282 | -0.0368 | No |
| 15 | Mfn2 | 2922 | 0.279 | -0.0333 | No |
| 16 | Acadm | 3097 | 0.269 | -0.0370 | No |
| 17 | Mtrf1 | 3299 | 0.256 | -0.0423 | No |
| 18 | Fh1 | 3306 | 0.255 | -0.0374 | No |
| 19 | Sucla2 | 3458 | 0.246 | -0.0403 | No |
| 20 | Ndufb5 | 3620 | 0.237 | -0.0438 | No |
| 21 | Mtrr | 3748 | 0.231 | -0.0458 | No |
| 22 | Slc25a20 | 3783 | 0.230 | -0.0429 | No |
| 23 | Cyb5a | 3801 | 0.228 | -0.0391 | No |
| 24 | Ndufa5 | 3887 | 0.224 | -0.0390 | No |
| 25 | Cpt1a | 3947 | 0.220 | -0.0376 | No |
| 26 | Gpx4 | 4053 | 0.214 | -0.0387 | No |
| 27 | Hadhb | 4093 | 0.211 | -0.0365 | No |
| 28 | Phyh | 4460 | 0.192 | -0.0517 | No |
| 29 | Mpc1 | 4592 | 0.186 | -0.0547 | No |
| 30 | Atp6v0c | 4923 | 0.171 | -0.0685 | No |
| 31 | Pmpca | 5008 | 0.168 | -0.0695 | No |
| 32 | Rhot1 | 5151 | 0.162 | -0.0736 | No |
| 33 | Pdha1 | 6059 | 0.125 | -0.1185 | No |
| 34 | Supv3l1 | 6159 | 0.121 | -0.1212 | No |
| 35 | Ech1 | 6297 | 0.118 | -0.1259 | No |
| 36 | Atp1b1 | 6303 | 0.118 | -0.1238 | No |
| 37 | Gpi1 | 6372 | 0.115 | -0.1250 | No |
| 38 | Prdx3 | 6620 | 0.105 | -0.1358 | No |
| 39 | Idh1 | 6873 | 0.095 | -0.1470 | No |
| 40 | Slc25a12 | 7036 | 0.089 | -0.1537 | No |
| 41 | Atp6v1c1 | 7124 | 0.086 | -0.1565 | No |
| 42 | Acadvl | 7151 | 0.085 | -0.1561 | No |
| 43 | Opa1 | 7423 | 0.074 | -0.1687 | No |
| 44 | Tomm70a | 7717 | 0.062 | -0.1828 | No |
| 45 | Slc25a11 | 7920 | 0.055 | -0.1922 | No |
| 46 | Bckdha | 7928 | 0.055 | -0.1915 | No |
| 47 | Glud1 | 7992 | 0.053 | -0.1937 | No |
| 48 | Iscu | 8015 | 0.052 | -0.1938 | No |
| 49 | Ogdh | 8049 | 0.050 | -0.1945 | No |
| 50 | Vdac3 | 8322 | 0.040 | -0.2079 | No |
| 51 | Dlat | 8740 | 0.023 | -0.2292 | No |
| 52 | Idh2 | 8949 | 0.016 | -0.2398 | No |
| 53 | Vdac1 | 8956 | 0.016 | -0.2398 | No |
| 54 | Hadha | 9209 | 0.007 | -0.2528 | No |
| 55 | Dlst | 9314 | 0.003 | -0.2582 | No |
| 56 | Immt | 9472 | -0.000 | -0.2664 | No |
| 57 | Ndufs1 | 9606 | -0.005 | -0.2732 | No |
| 58 | Cox10 | 9629 | -0.006 | -0.2743 | No |
| 59 | Uqcrc1 | 10020 | -0.022 | -0.2942 | No |
| 60 | Pdhb | 10079 | -0.024 | -0.2967 | No |
| 61 | Atp6v0e | 10178 | -0.028 | -0.3013 | No |
| 62 | Aco2 | 10300 | -0.031 | -0.3070 | No |
| 63 | Cyb5r3 | 10301 | -0.031 | -0.3064 | No |
| 64 | Casp7 | 10316 | -0.032 | -0.3064 | No |
| 65 | Timm10 | 10374 | -0.034 | -0.3087 | No |
| 66 | Idh3g | 10441 | -0.036 | -0.3115 | No |
| 67 | Polr2f | 10506 | -0.039 | -0.3140 | No |
| 68 | Cox15 | 10587 | -0.042 | -0.3173 | No |
| 69 | Mrpl11 | 10671 | -0.046 | -0.3207 | No |
| 70 | Mdh1 | 10761 | -0.049 | -0.3244 | No |
| 71 | Mrpl15 | 11003 | -0.058 | -0.3358 | No |
| 72 | Abcb7 | 11356 | -0.072 | -0.3528 | No |
| 73 | Pdk4 | 11426 | -0.075 | -0.3548 | No |
| 74 | Ndufs6 | 11454 | -0.076 | -0.3547 | No |
| 75 | Cox7a2l | 11562 | -0.081 | -0.3586 | No |
| 76 | Ndufa7 | 11804 | -0.090 | -0.3694 | No |
| 77 | Mrps30 | 11834 | -0.091 | -0.3691 | No |
| 78 | Idh3a | 11951 | -0.096 | -0.3732 | No |
| 79 | Acat1 | 11979 | -0.098 | -0.3726 | No |
| 80 | Ndufb2 | 11982 | -0.098 | -0.3707 | No |
| 81 | Tcirg1 | 12212 | -0.107 | -0.3805 | No |
| 82 | Etfa | 12278 | -0.110 | -0.3817 | No |
| 83 | Surf1 | 12408 | -0.115 | -0.3860 | No |
| 84 | Ndufa4 | 12444 | -0.117 | -0.3855 | No |
| 85 | Bax | 12449 | -0.117 | -0.3833 | No |
| 86 | Ndufa9 | 12759 | -0.130 | -0.3968 | No |
| 87 | Fdx1 | 12767 | -0.131 | -0.3945 | No |
| 88 | Oxa1l | 12881 | -0.136 | -0.3976 | No |
| 89 | Sdha | 12883 | -0.136 | -0.3949 | No |
| 90 | Cox17 | 12930 | -0.139 | -0.3945 | No |
| 91 | Acaa1a | 12976 | -0.141 | -0.3940 | No |
| 92 | Etfdh | 13128 | -0.148 | -0.3988 | No |
| 93 | Sdhd | 13129 | -0.148 | -0.3958 | No |
| 94 | Aldh6a1 | 13255 | -0.155 | -0.3992 | No |
| 95 | Nnt | 13351 | -0.160 | -0.4009 | No |
| 96 | Ndufb7 | 13435 | -0.164 | -0.4019 | No |
| 97 | Uqcrq | 13535 | -0.168 | -0.4037 | No |
| 98 | Htra2 | 13626 | -0.172 | -0.4049 | No |
| 99 | Bdh2 | 13646 | -0.173 | -0.4023 | No |
| 100 | Decr1 | 13681 | -0.175 | -0.4005 | No |
| 101 | Aifm1 | 13842 | -0.184 | -0.4051 | No |
| 102 | Mtx2 | 13856 | -0.184 | -0.4021 | No |
| 103 | Rhot2 | 13910 | -0.187 | -0.4010 | No |
| 104 | Cox8a | 13916 | -0.187 | -0.3975 | No |
| 105 | Atp6v0b | 14029 | -0.192 | -0.3994 | No |
| 106 | Atp6v1e1 | 14075 | -0.195 | -0.3978 | No |
| 107 | Cox11 | 14098 | -0.196 | -0.3949 | No |
| 108 | Timm9 | 14136 | -0.198 | -0.3929 | No |
| 109 | Mdh2 | 14415 | -0.211 | -0.4031 | No |
| 110 | Echs1 | 14419 | -0.212 | -0.3989 | No |
| 111 | Atp6v1g1 | 14598 | -0.220 | -0.4037 | No |
| 112 | Ndufs4 | 14626 | -0.222 | -0.4006 | No |
| 113 | Por | 14811 | -0.233 | -0.4055 | Yes |
| 114 | Slc25a4 | 14856 | -0.234 | -0.4030 | Yes |
| 115 | Cox5a | 14870 | -0.235 | -0.3989 | Yes |
| 116 | Retsat | 14882 | -0.236 | -0.3947 | Yes |
| 117 | Ldha | 14926 | -0.238 | -0.3921 | Yes |
| 118 | Vdac2 | 15030 | -0.244 | -0.3925 | Yes |
| 119 | Ndufv2 | 15038 | -0.244 | -0.3879 | Yes |
| 120 | Ndufs8 | 15304 | -0.257 | -0.3965 | Yes |
| 121 | Ndufab1 | 15428 | -0.264 | -0.3975 | Yes |
| 122 | Ndufb8 | 15510 | -0.268 | -0.3963 | Yes |
| 123 | Mrps22 | 15572 | -0.270 | -0.3940 | Yes |
| 124 | Suclg1 | 15721 | -0.279 | -0.3960 | Yes |
| 125 | Fxn | 15731 | -0.280 | -0.3908 | Yes |
| 126 | Mrps11 | 15738 | -0.280 | -0.3854 | Yes |
| 127 | Ndufa1 | 15897 | -0.290 | -0.3877 | Yes |
| 128 | Sdhb | 15983 | -0.296 | -0.3861 | Yes |
| 129 | Atp6v1f | 15996 | -0.298 | -0.3807 | Yes |
| 130 | Ndufc2 | 16046 | -0.303 | -0.3771 | Yes |
| 131 | Ndufb6 | 16052 | -0.303 | -0.3712 | Yes |
| 132 | Ndufa6 | 16074 | -0.305 | -0.3661 | Yes |
| 133 | Timm8b | 16257 | -0.317 | -0.3691 | Yes |
| 134 | Uqcrc2 | 16522 | -0.338 | -0.3760 | Yes |
| 135 | Etfb | 16558 | -0.340 | -0.3709 | Yes |
| 136 | Pdp1 | 16657 | -0.350 | -0.3689 | Yes |
| 137 | Got2 | 16692 | -0.353 | -0.3635 | Yes |
| 138 | Acaa2 | 16724 | -0.355 | -0.3579 | Yes |
| 139 | Cox7a2 | 16735 | -0.356 | -0.3512 | Yes |
| 140 | Cox6c | 16753 | -0.358 | -0.3448 | Yes |
| 141 | Slc25a5 | 16805 | -0.362 | -0.3401 | Yes |
| 142 | Cox7b | 16816 | -0.363 | -0.3332 | Yes |
| 143 | Cyc1 | 16850 | -0.366 | -0.3275 | Yes |
| 144 | Uqcr10 | 16876 | -0.368 | -0.3213 | Yes |
| 145 | Timm13 | 16955 | -0.375 | -0.3177 | Yes |
| 146 | Atp6ap1 | 17433 | -0.421 | -0.3341 | Yes |
| 147 | Acadsb | 17444 | -0.422 | -0.3260 | Yes |
| 148 | Mrpl34 | 17721 | -0.448 | -0.3313 | Yes |
| 149 | Slc25a3 | 17776 | -0.453 | -0.3249 | Yes |
| 150 | Cox5b | 17808 | -0.459 | -0.3172 | Yes |
| 151 | Eci1 | 17810 | -0.459 | -0.3079 | Yes |
| 152 | Idh3b | 17828 | -0.461 | -0.2994 | Yes |
| 153 | Tomm22 | 17857 | -0.463 | -0.2914 | Yes |
| 154 | Cox6b1 | 17936 | -0.471 | -0.2859 | Yes |
| 155 | Cs | 18115 | -0.492 | -0.2851 | Yes |
| 156 | Ndufs2 | 18233 | -0.509 | -0.2809 | Yes |
| 157 | Cox4i1 | 18237 | -0.510 | -0.2706 | Yes |
| 158 | Ndufb3 | 18258 | -0.515 | -0.2612 | Yes |
| 159 | Ndufs7 | 18261 | -0.515 | -0.2508 | Yes |
| 160 | Uqcrfs1 | 18272 | -0.516 | -0.2408 | Yes |
| 161 | Atp5pb | 18429 | -0.547 | -0.2378 | Yes |
| 162 | Hsd17b10 | 18472 | -0.555 | -0.2287 | Yes |
| 163 | Cox7c | 18510 | -0.565 | -0.2191 | Yes |
| 164 | Timm17a | 18526 | -0.569 | -0.2083 | Yes |
| 165 | Ndufa3 | 18637 | -0.593 | -0.2020 | Yes |
| 166 | Sdhc | 18672 | -0.599 | -0.1916 | Yes |
| 167 | Ndufv1 | 18802 | -0.638 | -0.1853 | Yes |
| 168 | Uqcrh | 18805 | -0.638 | -0.1724 | Yes |
| 169 | Phb2 | 18814 | -0.641 | -0.1598 | Yes |
| 170 | Ndufc1 | 18895 | -0.666 | -0.1504 | Yes |
| 171 | Mrps15 | 18897 | -0.667 | -0.1368 | Yes |
| 172 | Ndufa2 | 18899 | -0.668 | -0.1233 | Yes |
| 173 | Cox6a1 | 18991 | -0.710 | -0.1136 | Yes |
| 174 | Uqcr11 | 19096 | -0.773 | -0.1032 | Yes |
| 175 | Ndufa8 | 19107 | -0.781 | -0.0879 | Yes |
| 176 | Mrpl35 | 19131 | -0.808 | -0.0726 | Yes |
| 177 | Nqo2 | 19237 | -0.950 | -0.0587 | Yes |
| 178 | Timm50 | 19246 | -0.957 | -0.0396 | Yes |
| 179 | Ldhb | 19250 | -0.974 | -0.0200 | Yes |
| 180 | Uqcrb | 19280 | -1.123 | 0.0014 | Yes |

