Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group1_versus_Group3.MEP.mega_Pheno.cls #Group1_versus_Group3_repos
Phenotype	MEP.mega_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.3192386
Normalized Enrichment Score (NES)	1.2248609
Nominal p-value	0.13995942
FDR q-value	1.0
FWER p-Value	0.899

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ak1	118	0.743	0.0136	Yes
2	Gabarapl2	215	0.656	0.0260	Yes
3	Sirt2	287	0.612	0.0385	Yes
4	Eif4a2	342	0.589	0.0513	Yes
5	Ppfia4	422	0.564	0.0622	Yes
6	Notch1	471	0.550	0.0743	Yes
7	Mras	664	0.506	0.0777	Yes
8	Myom1	756	0.490	0.0860	Yes
9	Myh9	807	0.483	0.0962	Yes
10	Nav2	909	0.466	0.1033	Yes
11	Cd36	956	0.459	0.1131	Yes
12	Itgb5	1061	0.441	0.1193	Yes
13	Mylk	1089	0.437	0.1295	Yes
14	Sptan1	1276	0.418	0.1309	Yes
15	Ckb	1281	0.417	0.1418	Yes
16	Mylpf	1308	0.413	0.1514	Yes
17	Hdac5	1445	0.397	0.1548	Yes
18	Reep1	1478	0.393	0.1636	Yes
19	Gsn	1480	0.393	0.1740	Yes
20	Fhl1	1503	0.391	0.1832	Yes
21	Itgb1	1518	0.389	0.1928	Yes
22	Ifrd1	1599	0.381	0.1987	Yes
23	Flii	1604	0.381	0.2086	Yes
24	Slc6a8	1738	0.368	0.2115	Yes
25	Clu	1774	0.365	0.2193	Yes
26	Pdlim7	1781	0.364	0.2287	Yes
27	Igf1	1785	0.363	0.2382	Yes
28	Tpm2	1809	0.362	0.2466	Yes
29	Wwtr1	1950	0.350	0.2485	Yes
30	Vipr1	1974	0.347	0.2566	Yes
31	Adcy9	1999	0.344	0.2644	Yes
32	Sorbs1	2039	0.340	0.2714	Yes
33	Ryr1	2056	0.338	0.2796	Yes
34	Ncam1	2068	0.336	0.2879	Yes
35	Myom2	2128	0.332	0.2937	Yes
36	Schip1	2261	0.325	0.2954	Yes
37	Dmpk	2304	0.320	0.3017	Yes
38	Sspn	2486	0.307	0.3004	Yes
39	Myo1c	2583	0.303	0.3034	Yes
40	Cdh13	2609	0.301	0.3101	Yes
41	Gpx3	2783	0.289	0.3088	Yes
42	Csrp3	2841	0.285	0.3134	Yes
43	Dtna	2997	0.275	0.3126	Yes
44	Smtn	3132	0.266	0.3126	Yes
45	Lpin1	3274	0.257	0.3121	Yes
46	Ache	3397	0.249	0.3124	Yes
47	Tnnt1	3477	0.245	0.3148	Yes
48	Rit1	3516	0.244	0.3192	Yes
49	Cox7a1	3794	0.229	0.3109	No
50	Agrn	4021	0.216	0.3048	No
51	Mef2a	4090	0.211	0.3069	No
52	Agl	4111	0.210	0.3114	No
53	Ephb3	4430	0.194	0.2999	No
54	Aebp1	4497	0.190	0.3015	No
55	Ankrd2	4782	0.178	0.2914	No
56	Plxnb2	4995	0.169	0.2849	No
57	Fkbp1b	5129	0.163	0.2823	No
58	Acsl1	5275	0.158	0.2789	No
59	Stc2	5280	0.157	0.2829	No
60	Tnnt3	5635	0.142	0.2682	No
61	Mapk12	5654	0.142	0.2710	No
62	Rb1	5765	0.137	0.2689	No
63	Svil	5915	0.131	0.2646	No
64	Adam12	6089	0.124	0.2588	No
65	Tagln	6133	0.122	0.2598	No
66	Pick1	6704	0.102	0.2328	No
67	Crat	6777	0.099	0.2317	No
68	Atp2a1	6870	0.096	0.2294	No
69	Mef2d	6896	0.094	0.2306	No
70	Psen2	7189	0.083	0.2176	No
71	Foxo4	7230	0.082	0.2177	No
72	Igfbp7	7578	0.068	0.2014	No
73	Pfkm	7735	0.062	0.1949	No
74	Tsc2	7778	0.060	0.1943	No
75	Pygm	8212	0.044	0.1729	No
76	Myl4	8236	0.043	0.1728	No
77	Kcnh2	8300	0.041	0.1706	No
78	Sh3bgr	8465	0.034	0.1630	No
79	Fdps	8744	0.023	0.1491	No
80	Sphk1	8824	0.020	0.1455	No
81	Ldb3	9414	0.000	0.1148	No
82	Mef2c	9911	-0.018	0.0894	No
83	Sorbs3	10147	-0.027	0.0778	No
84	Eno3	10173	-0.028	0.0773	No
85	Col1a1	10269	-0.030	0.0731	No
86	Ptp4a3	10350	-0.033	0.0698	No
87	Hbegf	10430	-0.036	0.0666	No
88	Sh2b1	10596	-0.042	0.0591	No
89	Col4a2	10911	-0.055	0.0442	No
90	Ocel1	10949	-0.056	0.0438	No
91	Sgcd	11020	-0.059	0.0417	No
92	Akt2	11088	-0.061	0.0398	No
93	Kcnh1	11314	-0.070	0.0299	No
94	Itgb4	11749	-0.088	0.0096	No
95	Camk2b	11831	-0.091	0.0078	No
96	Tpm3	11981	-0.098	0.0026	No
97	Erbb3	12241	-0.109	-0.0080	No
98	App	12395	-0.115	-0.0129	No
99	Mybpc3	13125	-0.148	-0.0470	No
100	Klf5	13146	-0.149	-0.0441	No
101	Fgf2	13248	-0.154	-0.0453	No
102	Pkia	13446	-0.164	-0.0512	No
103	Tgfb1	13841	-0.184	-0.0669	No
104	Cnn3	13854	-0.184	-0.0626	No
105	Sparc	13929	-0.188	-0.0615	No
106	Bin1	13994	-0.190	-0.0598	No
107	Cdkn1a	13996	-0.190	-0.0548	No
108	Ctf1	14194	-0.200	-0.0598	No
109	Tpd52l1	14205	-0.201	-0.0550	No
110	Pde4dip	14380	-0.210	-0.0585	No
111	Bhlhe40	14416	-0.211	-0.0547	No
112	Nos1	14720	-0.228	-0.0644	No
113	Cryab	14795	-0.232	-0.0621	No
114	Mapre3	14817	-0.233	-0.0570	No
115	Dapk2	14914	-0.238	-0.0557	No
116	Kifc3	14940	-0.239	-0.0507	No
117	Gaa	15127	-0.247	-0.0538	No
118	Large1	15206	-0.251	-0.0512	No
119	Chrnb1	15207	-0.252	-0.0446	No
120	Lsp1	15208	-0.252	-0.0379	No
121	Actn2	15479	-0.266	-0.0449	No
122	Nqo1	15818	-0.285	-0.0550	No
123	Gnao1	16201	-0.313	-0.0666	No
124	Myl6b	16326	-0.321	-0.0645	No
125	Myh11	16425	-0.329	-0.0609	No
126	Prnp	16786	-0.360	-0.0701	No
127	Tead4	16787	-0.360	-0.0605	No
128	Bag1	16940	-0.373	-0.0586	No
129	Syngr2	17184	-0.395	-0.0607	No
130	Atp6ap1	17433	-0.421	-0.0625	No
131	Tnnc1	17442	-0.422	-0.0517	No
132	Lama2	17632	-0.439	-0.0499	No
133	Ckmt2	17740	-0.449	-0.0436	No
134	Dmd	18308	-0.522	-0.0593	No
135	Gadd45b	18799	-0.637	-0.0680	No
136	Pcx	18833	-0.646	-0.0525	No
137	Ablim1	19140	-0.813	-0.0469	No
138	Hspb8	19238	-0.951	-0.0268	No
139	Gja5	19283	-1.141	0.0013	No