Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group1_versus_Group3.MEP.mega_Pheno.cls #Group1_versus_Group3_repos
Phenotype	MEP.mega_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	0.17747465
Normalized Enrichment Score (NES)	0.735552
Nominal p-value	0.93465346
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Dusp1	47	0.862	0.0216	Yes
2	Jun	126	0.727	0.0378	Yes
3	Fos	169	0.692	0.0549	Yes
4	Ppfia4	422	0.564	0.0575	Yes
5	Hmox1	613	0.517	0.0620	Yes
6	Myh9	807	0.483	0.0653	Yes
7	Sdc2	961	0.458	0.0701	Yes
8	Ets1	998	0.451	0.0808	Yes
9	P4ha2	1251	0.420	0.0794	Yes
10	Gpc1	1312	0.412	0.0878	Yes
11	Klf7	1336	0.409	0.0980	Yes
12	Sdc3	1499	0.391	0.1004	Yes
13	Pgk1	1519	0.388	0.1102	Yes
14	Tpd52	1576	0.384	0.1180	Yes
15	Cav1	1700	0.371	0.1219	Yes
16	Vhl	1822	0.361	0.1257	Yes
17	Cavin1	1840	0.359	0.1348	Yes
18	Cp	1901	0.354	0.1416	Yes
19	Pfkp	1907	0.353	0.1511	Yes
20	Cavin3	1910	0.353	0.1609	Yes
21	P4ha1	2238	0.326	0.1529	Yes
22	Prkca	2282	0.322	0.1596	Yes
23	Inha	2561	0.305	0.1536	Yes
24	Gpc4	2629	0.299	0.1585	Yes
25	Mxi1	2800	0.287	0.1576	Yes
26	Rbpj	2802	0.287	0.1655	Yes
27	Xpnpep1	2963	0.276	0.1649	Yes
28	Dtna	2997	0.275	0.1708	Yes
29	Zfp36	3020	0.274	0.1773	Yes
30	Pfkfb3	3204	0.262	0.1750	Yes
31	Vldlr	3295	0.256	0.1775	Yes
32	Klhl24	3653	0.235	0.1654	No
33	Sap30	4242	0.202	0.1403	No
34	Atf3	4553	0.188	0.1294	No
35	Akap12	4571	0.187	0.1337	No
36	Nagk	4706	0.181	0.1317	No
37	Foxo3	4954	0.170	0.1236	No
38	Ddit4	5062	0.166	0.1226	No
39	Hk2	5221	0.160	0.1188	No
40	Hdlbp	5240	0.159	0.1223	No
41	Cdkn1b	5250	0.159	0.1263	No
42	Stc2	5280	0.157	0.1291	No
43	Bcl2	5728	0.138	0.1096	No
44	Aldoa	5809	0.135	0.1092	No
45	Rora	5835	0.134	0.1116	No
46	Ampd3	5858	0.133	0.1142	No
47	Btg1	5933	0.130	0.1139	No
48	Slc25a1	6026	0.127	0.1127	No
49	Pam	6169	0.120	0.1086	No
50	Ppargc1a	6202	0.120	0.1103	No
51	Tiparp	6264	0.119	0.1104	No
52	Gpi1	6372	0.115	0.1080	No
53	Pdgfb	6626	0.105	0.0977	No
54	Slc2a3	6797	0.098	0.0916	No
55	B4galnt2	7207	0.083	0.0725	No
56	Fosl2	7669	0.064	0.0502	No
57	Cdkn1c	7876	0.056	0.0411	No
58	Pgm2	7956	0.054	0.0384	No
59	Wsb1	7983	0.053	0.0386	No
60	Hspa5	7998	0.053	0.0393	No
61	Slc2a5	8122	0.048	0.0342	No
62	Kdm3a	8164	0.046	0.0333	No
63	Bnip3l	8197	0.045	0.0329	No
64	Pygm	8212	0.044	0.0334	No
65	Nedd4l	8392	0.037	0.0251	No
66	Zfp292	8440	0.035	0.0236	No
67	Ugp2	8542	0.031	0.0192	No
68	Eno1b	8564	0.030	0.0190	No
69	Ppp1r15a	8655	0.027	0.0150	No
70	Prdx5	8702	0.024	0.0133	No
71	Kdelr3	8912	0.017	0.0029	No
72	Pdk3	9038	0.013	-0.0033	No
73	Nr3c1	9118	0.010	-0.0072	No
74	Pgm1	9376	0.001	-0.0206	No
75	Tmem45a	9416	0.000	-0.0226	No
76	Bgn	9602	-0.005	-0.0321	No
77	Ier3	9622	-0.006	-0.0330	No
78	Csrp2	9723	-0.010	-0.0379	No
79	Maff	9909	-0.018	-0.0471	No
80	Slc37a4	9914	-0.018	-0.0468	No
81	Ankzf1	10066	-0.024	-0.0540	No
82	Eno3	10173	-0.028	-0.0588	No
83	Pdk1	10277	-0.030	-0.0633	No
84	Kif5a	10529	-0.040	-0.0753	No
85	Angptl4	10614	-0.043	-0.0785	No
86	Stbd1	10897	-0.054	-0.0917	No
87	Tnfaip3	10936	-0.056	-0.0921	No
88	Slc6a6	11060	-0.060	-0.0969	No
89	Map3k1	11144	-0.063	-0.0994	No
90	Ccng2	11186	-0.065	-0.0998	No
91	Errfi1	11303	-0.069	-0.1039	No
92	Cxcr4	11397	-0.074	-0.1067	No
93	Gpc3	11420	-0.074	-0.1058	No
94	Pim1	11445	-0.076	-0.1049	No
95	Pnrc1	11557	-0.081	-0.1084	No
96	Ext1	11711	-0.086	-0.1140	No
97	Selenbp1	11783	-0.089	-0.1152	No
98	Noct	11797	-0.090	-0.1134	No
99	Tgfbi	11940	-0.096	-0.1182	No
100	Hk1	11957	-0.097	-0.1163	No
101	Irs2	12138	-0.104	-0.1228	No
102	Atp7a	12164	-0.105	-0.1212	No
103	Tgfb3	12401	-0.115	-0.1303	No
104	Ero1a	12404	-0.115	-0.1272	No
105	Gbe1	12416	-0.116	-0.1245	No
106	Glrx	12469	-0.118	-0.1240	No
107	Tpi1	12566	-0.122	-0.1256	No
108	Mt1	12639	-0.125	-0.1258	No
109	Tpst2	12889	-0.137	-0.1350	No
110	Ids	12939	-0.140	-0.1337	No
111	Grhpr	12962	-0.141	-0.1309	No
112	Ndrg1	13020	-0.143	-0.1299	No
113	Gapdhs	13118	-0.148	-0.1308	No
114	Plin2	13194	-0.152	-0.1305	No
115	Klf6	13253	-0.155	-0.1293	No
116	Tgm2	13266	-0.155	-0.1255	No
117	Hs3st1	13285	-0.156	-0.1221	No
118	Hexa	13451	-0.165	-0.1262	No
119	Isg20	13570	-0.170	-0.1276	No
120	Fam162a	13574	-0.170	-0.1230	No
121	Jmjd6	13658	-0.174	-0.1225	No
122	Nfil3	13680	-0.175	-0.1187	No
123	Adora2b	13705	-0.176	-0.1150	No
124	Gcnt2	13775	-0.180	-0.1136	No
125	Ak4	13974	-0.189	-0.1187	No
126	Cdkn1a	13996	-0.190	-0.1145	No
127	B3galt6	14017	-0.191	-0.1102	No
128	Aldoc	14210	-0.201	-0.1146	No
129	Dcn	14308	-0.206	-0.1139	No
130	Bhlhe40	14416	-0.211	-0.1136	No
131	Mif	14424	-0.212	-0.1081	No
132	Scarb1	14595	-0.220	-0.1108	No
133	Siah2	14689	-0.227	-0.1093	No
134	Phkg1	14873	-0.235	-0.1123	No
135	Ldha	14926	-0.238	-0.1084	No
136	Eno2	15060	-0.246	-0.1085	No
137	Gaa	15127	-0.247	-0.1051	No
138	Large1	15206	-0.251	-0.1021	No
139	Vegfa	15380	-0.261	-0.1039	No
140	Ndst2	15709	-0.279	-0.1132	No
141	Gck	15780	-0.282	-0.1090	No
142	Ddit3	15811	-0.284	-0.1027	No
143	Casp6	15950	-0.294	-0.1017	No
144	Pklr	16164	-0.310	-0.1041	No
145	Pfkl	16198	-0.313	-0.0971	No
146	Sult2b1	16289	-0.319	-0.0929	No
147	Gys1	16572	-0.342	-0.0981	No
148	Plac8	16779	-0.359	-0.0989	No
149	S100a4	17528	-0.430	-0.1260	No
150	Il6	17586	-0.434	-0.1169	No
151	Anxa2	17863	-0.464	-0.1183	No
152	Ndst1	17951	-0.474	-0.1097	No
153	Fbp1	18044	-0.482	-0.1010	No
154	Cited2	18072	-0.485	-0.0889	No
155	Galk1	18163	-0.499	-0.0797	No
156	Rragd	18299	-0.520	-0.0722	No
157	Col5a1	18557	-0.578	-0.0695	No
158	Tes	18628	-0.591	-0.0567	No
159	Slc2a1	18641	-0.593	-0.0408	No
160	Car12	18763	-0.629	-0.0296	No
161	Ilvbl	18929	-0.684	-0.0191	No
162	Lxn	18935	-0.689	-0.0002	No
163	Plaur	18969	-0.702	0.0177	No