Details for gene set HALLMARK_G2M

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group1_versus_Group3.MEP.mega_Pheno.cls #Group1_versus_Group3_repos
Phenotype	MEP.mega_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)	-0.28467768
Normalized Enrichment Score (NES)	-1.0830013
Nominal p-value	0.36853004
FDR q-value	0.6094608
FWER p-Value	0.993

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hnrnpd	612	0.517	-0.0187	No
2	Efna5	1218	0.425	-0.0394	No
3	Marcks	1328	0.411	-0.0346	No
4	Hnrnpu	1440	0.398	-0.0301	No
5	Kpnb1	1673	0.374	-0.0326	No
6	Nasp	1714	0.369	-0.0252	No
7	Nolc1	2235	0.326	-0.0440	No
8	Xpo1	2543	0.306	-0.0522	No
9	Tfdp1	2574	0.304	-0.0460	No
10	Hira	2821	0.286	-0.0515	No
11	Cul1	3153	0.265	-0.0620	No
12	Mapk14	3405	0.249	-0.0687	No
13	Orc5	3415	0.248	-0.0628	No
14	Numa1	3479	0.245	-0.0598	No
15	Ilf3	3507	0.244	-0.0549	No
16	Amd1	3662	0.235	-0.0569	No
17	Abl1	3793	0.229	-0.0578	No
18	Slc12a2	3878	0.224	-0.0564	No
19	Sfpq	3951	0.220	-0.0546	No
20	Syncrip	4022	0.215	-0.0527	No
21	Hif1a	4177	0.207	-0.0554	No
22	Sap30	4242	0.202	-0.0535	No
23	Lbr	4342	0.198	-0.0536	No
24	Odc1	4354	0.197	-0.0491	No
25	Mcm2	4381	0.196	-0.0455	No
26	Mcm6	4560	0.187	-0.0499	No
27	Suv39h1	4642	0.185	-0.0494	No
28	Sqle	4759	0.179	-0.0509	No
29	Dr1	4820	0.176	-0.0495	No
30	Prpf4b	4830	0.175	-0.0455	No
31	Smarcc1	4953	0.170	-0.0475	No
32	Mcm3	5017	0.167	-0.0465	No
33	Kif5b	5176	0.161	-0.0506	No
34	Cdkn1b	5250	0.159	-0.0503	No
35	Ss18	5267	0.158	-0.0471	No
36	Brca2	5294	0.157	-0.0444	No
37	Ewsr1	5301	0.157	-0.0407	No
38	Chek1	5319	0.156	-0.0375	No
39	E2f3	5381	0.153	-0.0368	No
40	Lmnb1	5558	0.146	-0.0423	No
41	Srsf1	5585	0.144	-0.0399	No
42	Rbl1	5589	0.144	-0.0364	No
43	Prim2	5709	0.139	-0.0390	No
44	Slc38a1	5763	0.137	-0.0383	No
45	Gins2	5893	0.131	-0.0416	No
46	Cdc25a	5902	0.131	-0.0387	No
47	Tle3	6071	0.125	-0.0443	No
48	Rad21	6181	0.120	-0.0469	No
49	Mybl2	6564	0.108	-0.0641	No
50	Cdc7	6618	0.105	-0.0642	No
51	Orc6	6655	0.104	-0.0634	No
52	Uck2	6841	0.097	-0.0706	No
53	Cul4a	6852	0.096	-0.0686	No
54	Ythdc1	6859	0.096	-0.0665	No
55	Cdc45	6980	0.090	-0.0704	No
56	Tnpo2	7087	0.087	-0.0737	No
57	Srsf10	7190	0.083	-0.0769	No
58	Ncl	7263	0.081	-0.0786	No
59	Smad3	7265	0.081	-0.0766	No
60	Map3k20	7396	0.075	-0.0814	No
61	Hspa8	7397	0.075	-0.0795	No
62	Cul5	7407	0.075	-0.0781	No
63	Smc1a	7485	0.071	-0.0803	No
64	Rasal2	7663	0.064	-0.0879	No
65	Ccnt1	7705	0.063	-0.0884	No
66	Mtf2	7707	0.063	-0.0868	No
67	Hus1	7720	0.062	-0.0859	No
68	Fbxo5	7721	0.062	-0.0843	No
69	Notch2	7769	0.061	-0.0852	No
70	E2f4	7878	0.056	-0.0894	No
71	Pds5b	7910	0.055	-0.0895	No
72	Arid4a	7923	0.055	-0.0888	No
73	Cul3	8089	0.049	-0.0961	No
74	Nsd2	8095	0.049	-0.0951	No
75	Pole	8099	0.049	-0.0940	No
76	Pafah1b1	8193	0.045	-0.0978	No
77	Fancc	8352	0.038	-0.1050	No
78	Ezh2	8667	0.026	-0.1208	No
79	Casp8ap2	8721	0.024	-0.1229	No
80	Mcm5	8791	0.021	-0.1260	No
81	Ddx39a	8826	0.020	-0.1273	No
82	Cdc25b	8964	0.015	-0.1341	No
83	Wrn	9065	0.012	-0.1390	No
84	Atrx	9112	0.010	-0.1411	No
85	Stag1	9140	0.009	-0.1423	No
86	Chaf1a	9182	0.008	-0.1443	No
87	Lig3	9307	0.003	-0.1507	No
88	Tra2b	9359	0.002	-0.1533	No
89	Nup98	9365	0.002	-0.1535	No
90	G3bp1	9381	0.001	-0.1543	No
91	Incenp	9605	-0.005	-0.1658	No
92	Rps6ka5	9642	-0.006	-0.1675	No
93	Chmp1a	9750	-0.011	-0.1728	No
94	Atf5	9840	-0.015	-0.1771	No
95	Slc7a1	9912	-0.018	-0.1804	No
96	E2f2	10063	-0.024	-0.1876	No
97	Rpa2	10202	-0.028	-0.1941	No
98	Pola2	10212	-0.028	-0.1938	No
99	Jpt1	10307	-0.031	-0.1980	No
100	Tent4a	10336	-0.033	-0.1986	No
101	Rad54l	10571	-0.042	-0.2098	No
102	Kif22	10663	-0.045	-0.2133	No
103	Rad23b	10699	-0.046	-0.2140	No
104	Mnat1	10722	-0.047	-0.2139	No
105	Upf1	10910	-0.055	-0.2223	No
106	Prc1	10932	-0.056	-0.2219	No
107	Tmpo	10934	-0.056	-0.2206	No
108	Gspt1	11287	-0.069	-0.2372	No
109	Cdc6	11447	-0.076	-0.2436	No
110	Dkc1	11458	-0.077	-0.2421	No
111	Srsf2	11623	-0.083	-0.2486	No
112	Meis1	11651	-0.084	-0.2478	No
113	Ccnf	11716	-0.087	-0.2489	No
114	Top2a	11858	-0.092	-0.2540	No
115	Meis2	11867	-0.092	-0.2520	No
116	E2f1	11997	-0.098	-0.2562	No
117	Prmt5	12058	-0.101	-0.2568	No
118	H2bc12	12219	-0.107	-0.2624	No
119	Hmgb3	12264	-0.109	-0.2619	No
120	Nek2	12276	-0.110	-0.2596	No
121	Kif11	12382	-0.114	-0.2622	No
122	Aurka	12437	-0.117	-0.2620	No
123	Kif23	12559	-0.122	-0.2652	No
124	Top1	12710	-0.128	-0.2697	No
125	Cenpf	12743	-0.129	-0.2681	No
126	Snrpd1	12842	-0.135	-0.2697	No
127	Cdc27	12858	-0.136	-0.2670	No
128	Nup50	13017	-0.143	-0.2716	No
129	Cbx1	13036	-0.144	-0.2688	No
130	Pml	13340	-0.159	-0.2806	Yes
131	Foxn3	13350	-0.160	-0.2769	Yes
132	Espl1	13368	-0.160	-0.2737	Yes
133	Bub1	13372	-0.161	-0.2697	Yes
134	Slc7a5	13375	-0.161	-0.2657	Yes
135	Cdk1	13427	-0.164	-0.2641	Yes
136	Aurkb	13436	-0.164	-0.2603	Yes
137	Racgap1	13667	-0.175	-0.2679	Yes
138	Polq	13700	-0.176	-0.2650	Yes
139	Tgfb1	13841	-0.184	-0.2676	Yes
140	Stil	13865	-0.185	-0.2640	Yes
141	Odf2	14022	-0.192	-0.2673	Yes
142	Plk4	14110	-0.196	-0.2668	Yes
143	Smc2	14382	-0.210	-0.2755	Yes
144	Tacc3	14407	-0.211	-0.2714	Yes
145	Pbk	14412	-0.211	-0.2661	Yes
146	Plk1	14576	-0.219	-0.2691	Yes
147	Exo1	14657	-0.224	-0.2675	Yes
148	Smc4	14783	-0.231	-0.2681	Yes
149	Katna1	14877	-0.236	-0.2669	Yes
150	Ctcf	14967	-0.241	-0.2653	Yes
151	Kif4	14975	-0.242	-0.2594	Yes
152	Bard1	15132	-0.248	-0.2612	Yes
153	Kif2c	15196	-0.251	-0.2581	Yes
154	Dtymk	15220	-0.252	-0.2528	Yes
155	Cdkn2c	15584	-0.271	-0.2648	Yes
156	Kif20b	15650	-0.275	-0.2611	Yes
157	Stmn1	15743	-0.281	-0.2587	Yes
158	Egf	15784	-0.282	-0.2535	Yes
159	H2az1	15862	-0.288	-0.2502	Yes
160	Ttk	15886	-0.290	-0.2439	Yes
161	Tpx2	15949	-0.294	-0.2396	Yes
162	Dbf4	16094	-0.306	-0.2392	Yes
163	Kif15	16194	-0.313	-0.2363	Yes
164	Ndc80	16250	-0.316	-0.2311	Yes
165	Hmmr	16392	-0.326	-0.2301	Yes
166	Birc5	16430	-0.329	-0.2235	Yes
167	Cdk4	16700	-0.354	-0.2285	Yes
168	Mki67	16771	-0.359	-0.2229	Yes
169	Ccnd1	17111	-0.388	-0.2307	Yes
170	Mad2l1	17230	-0.399	-0.2266	Yes
171	Cenpe	17252	-0.401	-0.2173	Yes
172	Pttg1	17277	-0.404	-0.2082	Yes
173	Pura	17330	-0.410	-0.2004	Yes
174	Ccnb2	17343	-0.411	-0.1904	Yes
175	Cks2	17605	-0.436	-0.1929	Yes
176	H2ax	17684	-0.442	-0.1856	Yes
177	Ccna2	17717	-0.447	-0.1757	Yes
178	Ube2s	17738	-0.449	-0.1652	Yes
179	Knl1	17750	-0.450	-0.1542	Yes
180	Troap	17839	-0.462	-0.1469	Yes
181	Kmt5a	17883	-0.466	-0.1372	Yes
182	H2az2	18009	-0.479	-0.1314	Yes
183	Cdkn3	18032	-0.481	-0.1202	Yes
184	Myc	18210	-0.506	-0.1164	Yes
185	Bub3	18259	-0.515	-0.1057	Yes
186	Dmd	18308	-0.522	-0.0947	Yes
187	Nusap1	18434	-0.548	-0.0872	Yes
188	Cenpa	18631	-0.591	-0.0822	Yes
189	Traip	18674	-0.599	-0.0690	Yes
190	Bcl3	18695	-0.604	-0.0545	Yes
191	Cks1b	19026	-0.725	-0.0531	Yes
192	Ube2c	19100	-0.774	-0.0370	Yes
193	Hmga1b	19201	-0.897	-0.0191	Yes
194	Cdc20	19245	-0.955	0.0032	Yes