| Dataset | MEP.MEP.mega_Pheno.cls #Group1_versus_Group3.MEP.mega_Pheno.cls #Group1_versus_Group3_repos |
| Phenotype | MEP.mega_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.286771 |
| Normalized Enrichment Score (NES) | -1.3229352 |
| Nominal p-value | 0.054545455 |
| FDR q-value | 0.69977677 |
| FWER p-Value | 0.792 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Pgr | 138 | 0.716 | 0.0122 | No |
| 2 | Fos | 169 | 0.692 | 0.0295 | No |
| 3 | Cdh1 | 268 | 0.624 | 0.0413 | No |
| 4 | Llgl2 | 470 | 0.551 | 0.0458 | No |
| 5 | Farp1 | 729 | 0.494 | 0.0457 | No |
| 6 | Dlg5 | 957 | 0.459 | 0.0463 | No |
| 7 | Ckb | 1281 | 0.417 | 0.0408 | No |
| 8 | Prkar2b | 1305 | 0.414 | 0.0508 | No |
| 9 | Hmgcs2 | 1361 | 0.406 | 0.0590 | No |
| 10 | Papss2 | 1392 | 0.403 | 0.0684 | No |
| 11 | Prlr | 1549 | 0.386 | 0.0707 | No |
| 12 | Il17rb | 1697 | 0.371 | 0.0731 | No |
| 13 | Cav1 | 1700 | 0.371 | 0.0831 | No |
| 14 | Jak2 | 2088 | 0.335 | 0.0720 | No |
| 15 | Abhd2 | 2167 | 0.331 | 0.0769 | No |
| 16 | Slc24a3 | 2277 | 0.323 | 0.0800 | No |
| 17 | Ncor2 | 2475 | 0.308 | 0.0781 | No |
| 18 | Gper1 | 2739 | 0.292 | 0.0723 | No |
| 19 | Lsr | 2768 | 0.289 | 0.0786 | No |
| 20 | Zfp36 | 3020 | 0.274 | 0.0730 | No |
| 21 | Tob1 | 3087 | 0.270 | 0.0769 | No |
| 22 | Id2 | 3249 | 0.259 | 0.0755 | No |
| 23 | Myof | 3524 | 0.243 | 0.0678 | No |
| 24 | Slc16a1 | 3529 | 0.243 | 0.0742 | No |
| 25 | Tjp3 | 4028 | 0.215 | 0.0540 | No |
| 26 | Mest | 4045 | 0.214 | 0.0590 | No |
| 27 | Aff1 | 4144 | 0.208 | 0.0595 | No |
| 28 | Scnn1a | 4451 | 0.192 | 0.0488 | No |
| 29 | Dhcr7 | 4724 | 0.180 | 0.0395 | No |
| 30 | Cd9 | 4732 | 0.180 | 0.0440 | No |
| 31 | Clic3 | 5222 | 0.160 | 0.0228 | No |
| 32 | Tiam1 | 5555 | 0.146 | 0.0094 | No |
| 33 | Hspa4l | 5721 | 0.138 | 0.0045 | No |
| 34 | Bcl2 | 5728 | 0.138 | 0.0080 | No |
| 35 | Slc2a8 | 5772 | 0.136 | 0.0094 | No |
| 36 | Gins2 | 5893 | 0.131 | 0.0067 | No |
| 37 | Plac1 | 6577 | 0.107 | -0.0260 | No |
| 38 | Add3 | 6758 | 0.100 | -0.0327 | No |
| 39 | Fabp5 | 6864 | 0.096 | -0.0356 | No |
| 40 | Perp | 6895 | 0.094 | -0.0346 | No |
| 41 | Mettl3 | 7010 | 0.089 | -0.0381 | No |
| 42 | Elovl5 | 7225 | 0.082 | -0.0470 | No |
| 43 | Amfr | 7280 | 0.080 | -0.0477 | No |
| 44 | Impa2 | 7316 | 0.078 | -0.0474 | No |
| 45 | Rbbp8 | 7525 | 0.070 | -0.0563 | No |
| 46 | Mapt | 7546 | 0.069 | -0.0555 | No |
| 47 | Rab31 | 7745 | 0.061 | -0.0642 | No |
| 48 | Abca3 | 7746 | 0.061 | -0.0625 | No |
| 49 | Cyp26b1 | 8009 | 0.052 | -0.0748 | No |
| 50 | Kif20a | 8113 | 0.048 | -0.0788 | No |
| 51 | Jak1 | 8482 | 0.033 | -0.0972 | No |
| 52 | Fkbp4 | 8611 | 0.029 | -0.1030 | No |
| 53 | Pdcd4 | 8877 | 0.018 | -0.1164 | No |
| 54 | Idh2 | 8949 | 0.016 | -0.1197 | No |
| 55 | Slc22a5 | 8980 | 0.015 | -0.1208 | No |
| 56 | Unc13b | 8981 | 0.015 | -0.1204 | No |
| 57 | Celsr2 | 9026 | 0.013 | -0.1224 | No |
| 58 | Fkbp5 | 9297 | 0.004 | -0.1363 | No |
| 59 | Ltf | 9428 | 0.000 | -0.1431 | No |
| 60 | Chst8 | 9436 | 0.000 | -0.1435 | No |
| 61 | Klf4 | 9565 | -0.004 | -0.1501 | No |
| 62 | Slc26a2 | 9692 | -0.009 | -0.1564 | No |
| 63 | Chpt1 | 9780 | -0.012 | -0.1606 | No |
| 64 | Rabep1 | 9869 | -0.016 | -0.1648 | No |
| 65 | Xrcc3 | 9919 | -0.018 | -0.1669 | No |
| 66 | Cish | 10000 | -0.021 | -0.1705 | No |
| 67 | Flnb | 10073 | -0.024 | -0.1736 | No |
| 68 | Batf | 10353 | -0.033 | -0.1872 | No |
| 69 | Frk | 10600 | -0.043 | -0.1989 | No |
| 70 | Dnajc1 | 10620 | -0.044 | -0.1987 | No |
| 71 | St6galnac2 | 10642 | -0.045 | -0.1986 | No |
| 72 | Slc29a1 | 10794 | -0.050 | -0.2051 | No |
| 73 | Rnaseh2a | 10886 | -0.054 | -0.2084 | No |
| 74 | St14 | 10898 | -0.054 | -0.2075 | No |
| 75 | Sord | 10950 | -0.056 | -0.2087 | No |
| 76 | Itpk1 | 11196 | -0.066 | -0.2197 | No |
| 77 | Pkp3 | 11408 | -0.074 | -0.2287 | No |
| 78 | Btg3 | 11440 | -0.076 | -0.2282 | No |
| 79 | Cdc6 | 11447 | -0.076 | -0.2265 | No |
| 80 | Sfn | 11487 | -0.078 | -0.2264 | No |
| 81 | Fdft1 | 11603 | -0.082 | -0.2302 | No |
| 82 | Top2a | 11858 | -0.092 | -0.2409 | No |
| 83 | Kcnk5 | 12129 | -0.104 | -0.2522 | No |
| 84 | Blvrb | 12233 | -0.108 | -0.2546 | No |
| 85 | Snx10 | 12433 | -0.116 | -0.2619 | No |
| 86 | Nrip1 | 12884 | -0.136 | -0.2817 | No |
| 87 | Aldh3b1 | 12983 | -0.141 | -0.2829 | Yes |
| 88 | Tfpi2 | 12984 | -0.141 | -0.2791 | Yes |
| 89 | Opn3 | 13050 | -0.145 | -0.2785 | Yes |
| 90 | Pdzk1 | 13143 | -0.149 | -0.2793 | Yes |
| 91 | Ppif | 13175 | -0.150 | -0.2768 | Yes |
| 92 | Sgk1 | 13232 | -0.153 | -0.2756 | Yes |
| 93 | Anxa9 | 13317 | -0.158 | -0.2757 | Yes |
| 94 | Ptpn6 | 13355 | -0.160 | -0.2733 | Yes |
| 95 | Slc7a5 | 13375 | -0.161 | -0.2699 | Yes |
| 96 | Isg20 | 13570 | -0.170 | -0.2754 | Yes |
| 97 | Rps6ka2 | 13652 | -0.174 | -0.2749 | Yes |
| 98 | Il6st | 13745 | -0.179 | -0.2749 | Yes |
| 99 | Stil | 13865 | -0.185 | -0.2761 | Yes |
| 100 | Foxc1 | 13934 | -0.188 | -0.2745 | Yes |
| 101 | Ptger3 | 14079 | -0.195 | -0.2767 | Yes |
| 102 | Plk4 | 14110 | -0.196 | -0.2730 | Yes |
| 103 | Tpd52l1 | 14205 | -0.201 | -0.2724 | Yes |
| 104 | Cd44 | 14248 | -0.203 | -0.2691 | Yes |
| 105 | S100a9 | 14514 | -0.216 | -0.2771 | Yes |
| 106 | Scarb1 | 14595 | -0.220 | -0.2753 | Yes |
| 107 | Ugdh | 14624 | -0.222 | -0.2707 | Yes |
| 108 | Aldh3a2 | 14637 | -0.223 | -0.2653 | Yes |
| 109 | Siah2 | 14689 | -0.227 | -0.2618 | Yes |
| 110 | Ret | 14827 | -0.234 | -0.2626 | Yes |
| 111 | Olfm1 | 15130 | -0.248 | -0.2716 | Yes |
| 112 | Dynlt3 | 15191 | -0.251 | -0.2680 | Yes |
| 113 | Large1 | 15206 | -0.251 | -0.2619 | Yes |
| 114 | Gla | 15353 | -0.259 | -0.2624 | Yes |
| 115 | Igfbp4 | 15521 | -0.269 | -0.2639 | Yes |
| 116 | Egr3 | 15562 | -0.270 | -0.2586 | Yes |
| 117 | Mocs2 | 15798 | -0.283 | -0.2632 | Yes |
| 118 | Car2 | 15815 | -0.285 | -0.2563 | Yes |
| 119 | Myb | 15989 | -0.297 | -0.2573 | Yes |
| 120 | Tspan13 | 16022 | -0.300 | -0.2508 | Yes |
| 121 | Dcxr | 16033 | -0.302 | -0.2431 | Yes |
| 122 | Plxnb1 | 16068 | -0.304 | -0.2366 | Yes |
| 123 | Sult2b1 | 16289 | -0.319 | -0.2394 | Yes |
| 124 | Nab2 | 16354 | -0.323 | -0.2340 | Yes |
| 125 | Ptges | 16386 | -0.326 | -0.2268 | Yes |
| 126 | Atp2b4 | 16422 | -0.329 | -0.2197 | Yes |
| 127 | Gfus | 16465 | -0.332 | -0.2129 | Yes |
| 128 | Tst | 16511 | -0.337 | -0.2061 | Yes |
| 129 | Etfb | 16558 | -0.340 | -0.1992 | Yes |
| 130 | Plaat3 | 16563 | -0.341 | -0.1902 | Yes |
| 131 | Cox6c | 16753 | -0.358 | -0.1903 | Yes |
| 132 | Bag1 | 16940 | -0.373 | -0.1899 | Yes |
| 133 | Homer2 | 16984 | -0.377 | -0.1819 | Yes |
| 134 | Xbp1 | 16995 | -0.379 | -0.1721 | Yes |
| 135 | Tmprss3 | 17084 | -0.386 | -0.1662 | Yes |
| 136 | Ccnd1 | 17111 | -0.388 | -0.1570 | Yes |
| 137 | Rapgefl1 | 17117 | -0.389 | -0.1467 | Yes |
| 138 | Tnnc1 | 17442 | -0.422 | -0.1522 | Yes |
| 139 | Gale | 17626 | -0.438 | -0.1498 | Yes |
| 140 | Dnajc12 | 17751 | -0.450 | -0.1441 | Yes |
| 141 | Arl3 | 18406 | -0.542 | -0.1635 | Yes |
| 142 | Slc1a4 | 18518 | -0.567 | -0.1539 | Yes |
| 143 | Mdk | 18576 | -0.581 | -0.1411 | Yes |
| 144 | Ass1 | 18656 | -0.597 | -0.1290 | Yes |
| 145 | Fgfr3 | 18742 | -0.621 | -0.1166 | Yes |
| 146 | Car12 | 18763 | -0.629 | -0.1006 | Yes |
| 147 | Wfs1 | 18855 | -0.652 | -0.0876 | Yes |
| 148 | Dusp2 | 18968 | -0.702 | -0.0744 | Yes |
| 149 | Nxt1 | 19018 | -0.721 | -0.0573 | Yes |
| 150 | Cacna2d2 | 19069 | -0.755 | -0.0394 | Yes |
| 151 | Hspb8 | 19238 | -0.951 | -0.0224 | Yes |
| 152 | Cdc20 | 19245 | -0.955 | 0.0032 | Yes |

