| Dataset | MEP.MEP.mega_Pheno.cls #Group1_versus_Group3.MEP.mega_Pheno.cls #Group1_versus_Group3_repos |
| Phenotype | MEP.mega_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 0 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_EARLY |
| Enrichment Score (ES) | 0.24954374 |
| Normalized Enrichment Score (NES) | 1.1439991 |
| Nominal p-value | 0.14791666 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.958 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Ttc39a | 17 | 0.963 | 0.0212 | Yes |
| 2 | Olfml3 | 24 | 0.944 | 0.0426 | Yes |
| 3 | Elovl2 | 53 | 0.859 | 0.0608 | Yes |
| 4 | Mlph | 76 | 0.795 | 0.0779 | Yes |
| 5 | Rhobtb3 | 110 | 0.748 | 0.0933 | Yes |
| 6 | Pgr | 138 | 0.716 | 0.1084 | Yes |
| 7 | Fos | 169 | 0.692 | 0.1227 | Yes |
| 8 | Greb1 | 335 | 0.591 | 0.1276 | Yes |
| 9 | Inpp5f | 428 | 0.563 | 0.1357 | Yes |
| 10 | Tbc1d30 | 530 | 0.536 | 0.1427 | Yes |
| 11 | Rrp12 | 633 | 0.513 | 0.1492 | Yes |
| 12 | Rasgrp1 | 721 | 0.495 | 0.1560 | Yes |
| 13 | Farp1 | 729 | 0.494 | 0.1670 | Yes |
| 14 | Nav2 | 909 | 0.466 | 0.1683 | Yes |
| 15 | Kazn | 946 | 0.461 | 0.1770 | Yes |
| 16 | Mybbp1a | 1320 | 0.412 | 0.1670 | Yes |
| 17 | Snx24 | 1325 | 0.411 | 0.1762 | Yes |
| 18 | Papss2 | 1392 | 0.403 | 0.1820 | Yes |
| 19 | Slc39a6 | 1400 | 0.402 | 0.1909 | Yes |
| 20 | Reep1 | 1478 | 0.393 | 0.1959 | Yes |
| 21 | Asb13 | 1498 | 0.391 | 0.2038 | Yes |
| 22 | Il17rb | 1697 | 0.371 | 0.2020 | Yes |
| 23 | Zfp185 | 1742 | 0.367 | 0.2082 | Yes |
| 24 | Klf10 | 1929 | 0.351 | 0.2065 | Yes |
| 25 | Adcy9 | 1999 | 0.344 | 0.2108 | Yes |
| 26 | Jak2 | 2088 | 0.335 | 0.2139 | Yes |
| 27 | Med13l | 2111 | 0.334 | 0.2204 | Yes |
| 28 | Abhd2 | 2167 | 0.331 | 0.2251 | Yes |
| 29 | Mindy1 | 2187 | 0.329 | 0.2317 | Yes |
| 30 | Muc1 | 2214 | 0.328 | 0.2378 | Yes |
| 31 | Gja1 | 2241 | 0.326 | 0.2440 | Yes |
| 32 | Slc24a3 | 2277 | 0.323 | 0.2495 | Yes |
| 33 | Ncor2 | 2475 | 0.308 | 0.2463 | No |
| 34 | Hes1 | 2577 | 0.303 | 0.2480 | No |
| 35 | Tob1 | 3087 | 0.270 | 0.2276 | No |
| 36 | Mast4 | 3165 | 0.264 | 0.2296 | No |
| 37 | Myof | 3524 | 0.243 | 0.2165 | No |
| 38 | Slc16a1 | 3529 | 0.243 | 0.2219 | No |
| 39 | Mybl1 | 3584 | 0.239 | 0.2246 | No |
| 40 | Thsd4 | 3920 | 0.222 | 0.2122 | No |
| 41 | Podxl | 3930 | 0.221 | 0.2167 | No |
| 42 | Tjp3 | 4028 | 0.215 | 0.2166 | No |
| 43 | Aff1 | 4144 | 0.208 | 0.2154 | No |
| 44 | Nadsyn1 | 4156 | 0.208 | 0.2196 | No |
| 45 | Scnn1a | 4451 | 0.192 | 0.2086 | No |
| 46 | Dhcr7 | 4724 | 0.180 | 0.1986 | No |
| 47 | Cant1 | 4938 | 0.171 | 0.1914 | No |
| 48 | Dhrs3 | 5067 | 0.166 | 0.1885 | No |
| 49 | Bcl11b | 5103 | 0.164 | 0.1904 | No |
| 50 | Clic3 | 5222 | 0.160 | 0.1879 | No |
| 51 | Stc2 | 5280 | 0.157 | 0.1885 | No |
| 52 | Tiam1 | 5555 | 0.146 | 0.1776 | No |
| 53 | Abat | 5669 | 0.141 | 0.1749 | No |
| 54 | Bcl2 | 5728 | 0.138 | 0.1750 | No |
| 55 | Svil | 5915 | 0.131 | 0.1683 | No |
| 56 | B4galt1 | 6190 | 0.120 | 0.1568 | No |
| 57 | Tiparp | 6264 | 0.119 | 0.1557 | No |
| 58 | Add3 | 6758 | 0.100 | 0.1322 | No |
| 59 | Elf1 | 7161 | 0.085 | 0.1132 | No |
| 60 | Elovl5 | 7225 | 0.082 | 0.1118 | No |
| 61 | Amfr | 7280 | 0.080 | 0.1108 | No |
| 62 | Rbbp8 | 7525 | 0.070 | 0.0996 | No |
| 63 | Mapt | 7546 | 0.069 | 0.1002 | No |
| 64 | Kdm4b | 7600 | 0.067 | 0.0990 | No |
| 65 | Rab31 | 7745 | 0.061 | 0.0928 | No |
| 66 | Abca3 | 7746 | 0.061 | 0.0943 | No |
| 67 | Slc37a1 | 7958 | 0.054 | 0.0845 | No |
| 68 | Cyp26b1 | 8009 | 0.052 | 0.0831 | No |
| 69 | Isg20l2 | 8247 | 0.043 | 0.0717 | No |
| 70 | Tmem164 | 8338 | 0.039 | 0.0679 | No |
| 71 | Fkbp4 | 8611 | 0.029 | 0.0543 | No |
| 72 | Krt8 | 8976 | 0.015 | 0.0356 | No |
| 73 | Slc22a5 | 8980 | 0.015 | 0.0358 | No |
| 74 | Celsr2 | 9026 | 0.013 | 0.0338 | No |
| 75 | Akap1 | 9135 | 0.009 | 0.0283 | No |
| 76 | Fkbp5 | 9297 | 0.004 | 0.0200 | No |
| 77 | Cbfa2t3 | 9372 | 0.001 | 0.0162 | No |
| 78 | Klf4 | 9565 | -0.004 | 0.0062 | No |
| 79 | Slc26a2 | 9692 | -0.009 | -0.0001 | No |
| 80 | Chpt1 | 9780 | -0.012 | -0.0044 | No |
| 81 | Med24 | 9932 | -0.019 | -0.0119 | No |
| 82 | Celsr1 | 9982 | -0.021 | -0.0139 | No |
| 83 | Cish | 10000 | -0.021 | -0.0143 | No |
| 84 | Flnb | 10073 | -0.024 | -0.0175 | No |
| 85 | Fasn | 10116 | -0.026 | -0.0191 | No |
| 86 | Frk | 10600 | -0.043 | -0.0434 | No |
| 87 | Lrig1 | 10602 | -0.043 | -0.0425 | No |
| 88 | Slc1a1 | 11005 | -0.058 | -0.0621 | No |
| 89 | Dlc1 | 11085 | -0.061 | -0.0649 | No |
| 90 | Endod1 | 11166 | -0.064 | -0.0676 | No |
| 91 | Itpk1 | 11196 | -0.066 | -0.0676 | No |
| 92 | Syngr1 | 11338 | -0.071 | -0.0733 | No |
| 93 | Mpped2 | 11477 | -0.078 | -0.0787 | No |
| 94 | Sfn | 11487 | -0.078 | -0.0774 | No |
| 95 | Fdft1 | 11603 | -0.082 | -0.0815 | No |
| 96 | Igf1r | 11782 | -0.089 | -0.0888 | No |
| 97 | Rhod | 11915 | -0.094 | -0.0935 | No |
| 98 | Sybu | 11975 | -0.098 | -0.0944 | No |
| 99 | Kcnk5 | 12129 | -0.104 | -0.1000 | No |
| 100 | Blvrb | 12233 | -0.108 | -0.1029 | No |
| 101 | Nrip1 | 12884 | -0.136 | -0.1337 | No |
| 102 | Aldh3b1 | 12983 | -0.141 | -0.1355 | No |
| 103 | Opn3 | 13050 | -0.145 | -0.1357 | No |
| 104 | Fhl2 | 13100 | -0.147 | -0.1349 | No |
| 105 | Pdzk1 | 13143 | -0.149 | -0.1336 | No |
| 106 | Ppif | 13175 | -0.150 | -0.1318 | No |
| 107 | Pmaip1 | 13244 | -0.154 | -0.1318 | No |
| 108 | Tgm2 | 13266 | -0.155 | -0.1294 | No |
| 109 | Anxa9 | 13317 | -0.158 | -0.1284 | No |
| 110 | Slc7a5 | 13375 | -0.161 | -0.1276 | No |
| 111 | Krt18 | 13563 | -0.169 | -0.1335 | No |
| 112 | Rps6ka2 | 13652 | -0.174 | -0.1341 | No |
| 113 | Tgif2 | 13657 | -0.174 | -0.1303 | No |
| 114 | Retreg1 | 13735 | -0.178 | -0.1303 | No |
| 115 | Il6st | 13745 | -0.179 | -0.1267 | No |
| 116 | Foxc1 | 13934 | -0.188 | -0.1322 | No |
| 117 | Gab2 | 14170 | -0.199 | -0.1399 | No |
| 118 | Tpd52l1 | 14205 | -0.201 | -0.1370 | No |
| 119 | Cd44 | 14248 | -0.203 | -0.1346 | No |
| 120 | Sec14l2 | 14361 | -0.209 | -0.1356 | No |
| 121 | Bhlhe40 | 14416 | -0.211 | -0.1336 | No |
| 122 | Rara | 14585 | -0.219 | -0.1373 | No |
| 123 | Scarb1 | 14595 | -0.220 | -0.1328 | No |
| 124 | P2ry2 | 14666 | -0.225 | -0.1313 | No |
| 125 | Siah2 | 14689 | -0.227 | -0.1272 | No |
| 126 | Unc119 | 14714 | -0.228 | -0.1232 | No |
| 127 | Ret | 14827 | -0.234 | -0.1237 | No |
| 128 | Slc7a2 | 14901 | -0.237 | -0.1221 | No |
| 129 | Olfm1 | 15130 | -0.248 | -0.1283 | No |
| 130 | Dynlt3 | 15191 | -0.251 | -0.1257 | No |
| 131 | Gla | 15353 | -0.259 | -0.1282 | No |
| 132 | Igfbp4 | 15521 | -0.269 | -0.1307 | No |
| 133 | Egr3 | 15562 | -0.270 | -0.1266 | No |
| 134 | Myb | 15989 | -0.297 | -0.1420 | No |
| 135 | Sult2b1 | 16289 | -0.319 | -0.1503 | No |
| 136 | Ptges | 16386 | -0.326 | -0.1479 | No |
| 137 | Plaat3 | 16563 | -0.341 | -0.1492 | No |
| 138 | Deptor | 16583 | -0.343 | -0.1424 | No |
| 139 | Pex11a | 16588 | -0.343 | -0.1347 | No |
| 140 | Ugcg | 16628 | -0.346 | -0.1288 | No |
| 141 | Bag1 | 16940 | -0.373 | -0.1365 | No |
| 142 | Sh3bp5 | 16945 | -0.374 | -0.1281 | No |
| 143 | Xbp1 | 16995 | -0.379 | -0.1220 | No |
| 144 | Rab17 | 17027 | -0.381 | -0.1148 | No |
| 145 | Tmprss3 | 17084 | -0.386 | -0.1089 | No |
| 146 | Slc19a2 | 17108 | -0.388 | -0.1012 | No |
| 147 | Ccnd1 | 17111 | -0.388 | -0.0924 | No |
| 148 | Rapgefl1 | 17117 | -0.389 | -0.0837 | No |
| 149 | Wwc1 | 17553 | -0.431 | -0.0966 | No |
| 150 | Myc | 18210 | -0.506 | -0.1192 | No |
| 151 | Arl3 | 18406 | -0.542 | -0.1170 | No |
| 152 | Slc1a4 | 18518 | -0.567 | -0.1097 | No |
| 153 | Slc2a1 | 18641 | -0.593 | -0.1025 | No |
| 154 | Gfra1 | 18750 | -0.623 | -0.0939 | No |
| 155 | Car12 | 18763 | -0.629 | -0.0801 | No |
| 156 | Wfs1 | 18855 | -0.652 | -0.0698 | No |
| 157 | Nxt1 | 19018 | -0.721 | -0.0618 | No |
| 158 | Mreg | 19051 | -0.742 | -0.0464 | No |
| 159 | Ablim1 | 19140 | -0.813 | -0.0323 | No |
| 160 | Ar | 19162 | -0.835 | -0.0143 | No |
| 161 | Hspb8 | 19238 | -0.951 | 0.0036 | No |

