Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group1_versus_Group3.MEP.mega_Pheno.cls #Group1_versus_Group3_repos
Phenotype	MEP.mega_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.27827868
Normalized Enrichment Score (NES)	-1.2329028
Nominal p-value	0.21862349
FDR q-value	0.9503712
FWER p-Value	0.896

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Npr2	13	1.030	0.0312	No
2	Zfp707	59	0.836	0.0548	No
3	Ak1	118	0.743	0.0748	No
4	Usp11	452	0.555	0.0746	No
5	Adcy6	1398	0.402	0.0377	No
6	Nfx1	2057	0.338	0.0139	No
7	Prim1	2091	0.335	0.0225	No
8	Eloa	2431	0.312	0.0145	No
9	Hcls1	2610	0.301	0.0145	No
10	Nme3	2675	0.296	0.0203	No
11	Ercc8	2754	0.290	0.0253	No
12	Umps	2780	0.289	0.0329	No
13	Vps37b	2855	0.284	0.0379	No
14	Srsf6	2864	0.283	0.0462	No
15	Tarbp2	3187	0.263	0.0375	No
16	Gtf2h5	3622	0.237	0.0222	No
17	Smad5	3969	0.219	0.0110	No
18	Gpx4	4053	0.214	0.0133	No
19	Rad52	4138	0.209	0.0153	No
20	Polb	4325	0.199	0.0118	No
21	Pola1	4373	0.196	0.0154	No
22	Pold3	4403	0.195	0.0199	No
23	Cstf3	4564	0.187	0.0174	No
24	Ago4	4765	0.178	0.0125	No
25	Pde6g	4937	0.171	0.0088	No
26	Cant1	4938	0.171	0.0141	No
27	Nudt21	4955	0.170	0.0185	No
28	Rev3l	4986	0.169	0.0222	No
29	Mpc2	5045	0.166	0.0243	No
30	Ada	5237	0.159	0.0193	No
31	Rad51	5345	0.155	0.0185	No
32	Brf2	5447	0.150	0.0179	No
33	Ddb1	5620	0.143	0.0134	No
34	Pcna	5656	0.141	0.0159	No
35	Lig1	5689	0.140	0.0186	No
36	Polr3gl	5716	0.138	0.0215	No
37	Gmpr2	5810	0.134	0.0208	No
38	Aaas	5901	0.131	0.0202	No
39	Nelfcd	6030	0.126	0.0174	No
40	Sf3a3	6383	0.114	0.0026	No
41	Tsg101	6697	0.102	-0.0106	No
42	Cda	6910	0.094	-0.0187	No
43	Taf10	6981	0.090	-0.0196	No
44	Gtf2f1	8123	0.048	-0.0777	No
45	Bcap31	8148	0.047	-0.0775	No
46	Nt5c3	8452	0.034	-0.0922	No
47	Poll	8489	0.033	-0.0931	No
48	Rfc4	8760	0.022	-0.1065	No
49	Zwint	8840	0.020	-0.1100	No
50	Cmpk2	9139	0.009	-0.1253	No
51	Stx3	9223	0.007	-0.1294	No
52	Polr2h	9244	0.006	-0.1303	No
53	Polr2k	9270	0.005	-0.1314	No
54	Rala	9282	0.004	-0.1319	No
55	Gtf2b	9382	0.001	-0.1370	No
56	Ell	9471	-0.000	-0.1416	No
57	Rnmt	9489	-0.001	-0.1424	No
58	Sdcbp	9647	-0.007	-0.1504	No
59	Snapc4	9721	-0.010	-0.1539	No
60	Ercc4	9747	-0.011	-0.1549	No
61	Supt5	9894	-0.017	-0.1620	No
62	Dut	9939	-0.019	-0.1637	No
63	Rpa2	10202	-0.028	-0.1765	No
64	Pola2	10212	-0.028	-0.1761	No
65	Polr2d	10411	-0.035	-0.1853	No
66	Pom121	10434	-0.036	-0.1854	No
67	Taf1c	10489	-0.038	-0.1870	No
68	Polr2f	10506	-0.039	-0.1867	No
69	Dctn4	10508	-0.039	-0.1855	No
70	Nme1	10546	-0.041	-0.1862	No
71	Mrpl40	10610	-0.043	-0.1881	No
72	Polh	10692	-0.046	-0.1909	No
73	Adrm1	10839	-0.052	-0.1969	No
74	Ercc5	10900	-0.054	-0.1984	No
75	Polr2a	10951	-0.056	-0.1992	No
76	Ddb2	11331	-0.071	-0.2168	No
77	Polr3c	11367	-0.072	-0.2164	No
78	Nme4	11374	-0.072	-0.2145	No
79	Pde4b	11778	-0.089	-0.2328	No
80	Nelfe	11842	-0.091	-0.2332	No
81	Pold1	11918	-0.095	-0.2342	No
82	Dgcr8	11934	-0.095	-0.2320	No
83	Ercc2	11960	-0.097	-0.2303	No
84	Alyref	12105	-0.103	-0.2347	No
85	Polr1d	12312	-0.111	-0.2420	No
86	Surf1	12408	-0.115	-0.2434	No
87	Rae1	12496	-0.120	-0.2442	No
88	Polr1h	12513	-0.120	-0.2413	No
89	Taf13	12692	-0.127	-0.2466	No
90	Ak3	12800	-0.133	-0.2481	No
91	Impdh2	12869	-0.136	-0.2474	No
92	Ssrp1	12908	-0.138	-0.2452	No
93	Cox17	12930	-0.139	-0.2420	No
94	Trp53	13037	-0.144	-0.2430	No
95	Edf1	13141	-0.148	-0.2438	No
96	Xpc	13318	-0.158	-0.2481	No
97	Pold4	13374	-0.161	-0.2460	No
98	Polr1c	13402	-0.162	-0.2424	No
99	Guk1	13596	-0.171	-0.2471	No
100	Upf3b	13677	-0.175	-0.2459	No
101	Nelfb	14010	-0.191	-0.2573	No
102	Snapc5	14234	-0.202	-0.2627	No
103	Rrm2b	14259	-0.204	-0.2576	No
104	Polr2j	14346	-0.208	-0.2557	No
105	Ercc3	14571	-0.218	-0.2606	No
106	Ercc1	14911	-0.238	-0.2709	Yes
107	Cetn2	14960	-0.240	-0.2660	Yes
108	Sec61a1	15047	-0.245	-0.2629	Yes
109	Rfc5	15184	-0.250	-0.2622	Yes
110	Ncbp2	15321	-0.258	-0.2613	Yes
111	Polr2c	15331	-0.258	-0.2538	Yes
112	Clp1	15532	-0.270	-0.2559	Yes
113	Nudt9	15639	-0.274	-0.2529	Yes
114	Supt4a	15909	-0.291	-0.2579	Yes
115	Gtf2h1	16024	-0.300	-0.2546	Yes
116	Nt5c	16126	-0.308	-0.2503	Yes
117	Rfc2	16237	-0.316	-0.2463	Yes
118	Rpa3	16349	-0.323	-0.2420	Yes
119	Taf12	16435	-0.330	-0.2363	Yes
120	Tyms	16573	-0.342	-0.2328	Yes
121	Polr2g	16617	-0.346	-0.2244	Yes
122	Pole4	16823	-0.363	-0.2238	Yes
123	Polr2e	16893	-0.369	-0.2160	Yes
124	Gtf3c5	17291	-0.406	-0.2241	Yes
125	Taf9	17370	-0.413	-0.2154	Yes
126	Gsdme	17447	-0.422	-0.2063	Yes
127	Rfc3	17563	-0.432	-0.1989	Yes
128	Mpg	17624	-0.438	-0.1885	Yes
129	Eif1b	17784	-0.454	-0.1827	Yes
130	Fen1	17835	-0.462	-0.1710	Yes
131	Rbx1	18099	-0.490	-0.1696	Yes
132	Dguok	18151	-0.497	-0.1568	Yes
133	Gtf2h3	18192	-0.504	-0.1433	Yes
134	Aprt	18238	-0.510	-0.1298	Yes
135	Tk2	18372	-0.533	-0.1203	Yes
136	Vps28	18422	-0.545	-0.1059	Yes
137	Pnp	18520	-0.567	-0.0934	Yes
138	Gtf2a2	18537	-0.572	-0.0765	Yes
139	Taf6	18554	-0.578	-0.0595	Yes
140	Arl6ip1	18681	-0.601	-0.0474	Yes
141	Itpa	18689	-0.602	-0.0292	Yes
142	Dad1	18743	-0.621	-0.0127	Yes
143	Sac3d1	18793	-0.635	0.0044	Yes
144	Polr2i	19020	-0.722	0.0150	Yes