Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group1_versus_Group3.MEP.mega_Pheno.cls #Group1_versus_Group3_repos
Phenotype	MEP.mega_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	0.17699575
Normalized Enrichment Score (NES)	0.80871207
Nominal p-value	0.8918919
FDR q-value	0.98511136
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Pea15a	122	0.734	0.0160	Yes
2	Jun	126	0.727	0.0380	Yes
3	Rhob	164	0.694	0.0572	Yes
4	Il1a	306	0.601	0.0682	Yes
5	Gstm2	369	0.578	0.0826	Yes
6	Hmox1	613	0.517	0.0856	Yes
7	Satb1	671	0.504	0.0980	Yes
8	Nefh	972	0.456	0.0963	Yes
9	Madd	1012	0.449	0.1079	Yes
10	Sptan1	1276	0.418	0.1069	Yes
11	Cdk2	1285	0.416	0.1192	Yes
12	Ppp3r1	1332	0.410	0.1293	Yes
13	Txnip	1367	0.405	0.1398	Yes
14	Gsn	1480	0.393	0.1460	Yes
15	Fdxr	1522	0.388	0.1556	Yes
16	Cav1	1700	0.371	0.1577	Yes
17	Clu	1774	0.365	0.1650	Yes
18	Lmna	1818	0.361	0.1738	Yes
19	Gsr	2104	0.334	0.1691	Yes
20	Slc20a1	2205	0.328	0.1739	Yes
21	Ptk2	2332	0.318	0.1770	Yes
22	Aifm3	2525	0.307	0.1763	No
23	Gpx3	2783	0.289	0.1717	No
24	Dnm1l	2988	0.275	0.1695	No
25	Sat1	3215	0.261	0.1656	No
26	Mcl1	3461	0.246	0.1603	No
27	Cd38	3519	0.243	0.1648	No
28	Dffa	3605	0.238	0.1676	No
29	Cyld	3970	0.219	0.1553	No
30	Pak1	4039	0.214	0.1583	No
31	Gpx4	4053	0.214	0.1641	No
32	Dap	4157	0.208	0.1650	No
33	Bid	4160	0.207	0.1712	No
34	Brca1	4297	0.200	0.1702	No
35	Bmp2	4420	0.194	0.1698	No
36	Atf3	4553	0.188	0.1686	No
37	Timp3	4983	0.169	0.1514	No
38	Ank	5058	0.166	0.1526	No
39	Gadd45a	5163	0.162	0.1521	No
40	Cdkn1b	5250	0.159	0.1524	No
41	Ppt1	5456	0.150	0.1463	No
42	Bmf	5690	0.140	0.1384	No
43	Casp2	5698	0.139	0.1423	No
44	Igfbp6	6174	0.120	0.1212	No
45	Lef1	6389	0.114	0.1135	No
46	Il18	6542	0.109	0.1088	No
47	Wee1	6550	0.108	0.1118	No
48	Birc3	6610	0.106	0.1119	No
49	Xiap	6630	0.105	0.1141	No
50	Cflar	6916	0.093	0.1021	No
51	Ctnnb1	6995	0.090	0.1008	No
52	Tnfsf10	7149	0.085	0.0954	No
53	Psen2	7189	0.083	0.0959	No
54	F2r	7195	0.083	0.0982	No
55	Ppp2r5b	7206	0.083	0.1001	No
56	Rnasel	7255	0.081	0.1001	No
57	Sod2	7520	0.070	0.0885	No
58	Dnajc3	7564	0.068	0.0883	No
59	Mgmt	7580	0.068	0.0896	No
60	Bcl2l11	7787	0.060	0.0807	No
61	Crebbp	7825	0.059	0.0805	No
62	Psen1	8069	0.050	0.0694	No
63	Bcap31	8148	0.047	0.0667	No
64	Bnip3l	8197	0.045	0.0656	No
65	Btg2	8710	0.024	0.0396	No
66	Pdcd4	8877	0.018	0.0315	No
67	Mmp2	8955	0.016	0.0280	No
68	Cdc25b	8964	0.015	0.0280	No
69	Tgfb2	8999	0.014	0.0267	No
70	Bcl2l1	9046	0.013	0.0246	No
71	Igf2r	9092	0.011	0.0226	No
72	Smad7	9313	0.003	0.0112	No
73	Bgn	9602	-0.005	-0.0036	No
74	Ier3	9622	-0.006	-0.0045	No
75	Bik	9733	-0.011	-0.0099	No
76	Add1	10088	-0.025	-0.0276	No
77	Cth	10292	-0.031	-0.0372	No
78	Casp7	10316	-0.032	-0.0375	No
79	Etf1	10538	-0.041	-0.0478	No
80	Casp8	10777	-0.049	-0.0587	No
81	Bcl2l2	10846	-0.052	-0.0606	No
82	Ccnd2	11242	-0.067	-0.0792	No
83	Gna15	11245	-0.067	-0.0773	No
84	Plcb2	11252	-0.067	-0.0755	No
85	Btg3	11440	-0.076	-0.0830	No
86	Diablo	11501	-0.079	-0.0837	No
87	Top2a	11858	-0.092	-0.0995	No
88	Erbb3	12241	-0.109	-0.1161	No
89	App	12395	-0.115	-0.1206	No
90	Bax	12449	-0.117	-0.1198	No
91	Casp3	12489	-0.119	-0.1182	No
92	Sod1	12956	-0.140	-0.1382	No
93	Fas	13045	-0.145	-0.1384	No
94	Ifitm3	13094	-0.147	-0.1365	No
95	Rela	13228	-0.153	-0.1387	No
96	Pmaip1	13244	-0.154	-0.1348	No
97	Casp9	13303	-0.157	-0.1331	No
98	Lgals3	13496	-0.166	-0.1380	No
99	Krt18	13563	-0.169	-0.1363	No
100	Isg20	13570	-0.170	-0.1315	No
101	Casp4	13692	-0.176	-0.1324	No
102	Ebp	13883	-0.186	-0.1367	No
103	Dpyd	13904	-0.187	-0.1320	No
104	Rhot2	13910	-0.187	-0.1266	No
105	Cdkn1a	13996	-0.190	-0.1252	No
106	F2	14006	-0.191	-0.1199	No
107	Cd44	14248	-0.203	-0.1263	No
108	Dap3	14287	-0.205	-0.1220	No
109	Rock1	14292	-0.205	-0.1160	No
110	Dcn	14308	-0.206	-0.1105	No
111	Dnaja1	14355	-0.208	-0.1065	No
112	Timp2	14374	-0.209	-0.1011	No
113	Rara	14585	-0.219	-0.1053	No
114	Retsat	14882	-0.236	-0.1136	No
115	Bcl10	14947	-0.240	-0.1096	No
116	Nedd9	15020	-0.243	-0.1060	No
117	Vdac2	15030	-0.244	-0.0990	No
118	Eno2	15060	-0.246	-0.0930	No
119	Egr3	15562	-0.270	-0.1109	No
120	Ddit3	15811	-0.284	-0.1152	No
121	Tspo	15938	-0.294	-0.1128	No
122	Casp6	15950	-0.294	-0.1044	No
123	Tap1	16073	-0.304	-0.1015	No
124	Cd69	16283	-0.319	-0.1027	No
125	Pdgfrb	16339	-0.322	-0.0958	No
126	Ifngr1	16438	-0.330	-0.0908	No
127	Hgf	16671	-0.351	-0.0922	No
128	Tnf	16734	-0.356	-0.0846	No
129	Casp1	16812	-0.362	-0.0776	No
130	Gch1	16869	-0.367	-0.0693	No
131	Hmgb2	16896	-0.370	-0.0594	No
132	Tnfrsf12a	16941	-0.374	-0.0503	No
133	Ccnd1	17111	-0.388	-0.0473	No
134	Gpx1	17365	-0.412	-0.0480	No
135	Il6	17586	-0.434	-0.0462	No
136	Irf1	17783	-0.454	-0.0426	No
137	H1f0	17939	-0.472	-0.0363	No
138	Sc5d	18002	-0.478	-0.0250	No
139	Il1b	18081	-0.487	-0.0142	No
140	Tgfbr3	18288	-0.518	-0.0092	No
141	Gadd45b	18799	-0.637	-0.0164	No
142	Anxa1	18826	-0.644	0.0019	No
143	Sqstm1	19078	-0.761	0.0119	No