DatasetMEP.MEP.mega_Pheno.cls
#Group1_versus_Group2.MEP.mega_Pheno.cls
#Group1_versus_Group2_repos
PhenotypeMEP.mega_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class1
GeneSetHALLMARK_PROTEIN_SECRETION
Enrichment Score (ES)-0.30496767
Normalized Enrichment Score (NES)-1.4703002
Nominal p-value0.07293666
FDR q-value1.0
FWER p-Value0.487
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PROTEIN_SECRETION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Napa11500.439-0.0299No
2Cav213080.419-0.0095No
3Scrn116000.3860.0017No
4Cd6318160.3670.0156No
5Gla36790.236-0.0652No
6Tom1l138270.229-0.0572No
7Rab942900.204-0.0673No
8Tpd5243590.201-0.0571No
9Vps4b45320.193-0.0529No
10Arfgef245740.191-0.0420No
11Sec31a52040.161-0.0638No
12Anp32e52970.156-0.0579No
13Tsg10154890.148-0.0577No
14Yipf654980.148-0.0480No
15Scamp360650.125-0.0690No
16Gnas63230.116-0.0744No
17Rab1467220.100-0.0883No
18Vps4570450.088-0.0991No
19Krt1877900.061-0.1336No
20Ergic380210.053-0.1419No
21Vamp480310.053-0.1388No
22Copb180970.050-0.1388No
23Gosr289550.022-0.1818No
24Igf2r90880.018-0.1875No
25Mapk192570.012-0.1954No
26Dnm1l94520.006-0.2051No
27Rab22a9686-0.001-0.2171No
28Cog29830-0.006-0.2242No
29Snap239942-0.010-0.2293No
30Clta9985-0.011-0.2307No
31Ocrl9995-0.012-0.2304No
32Adam1010045-0.013-0.2321No
33Ykt610049-0.013-0.2313No
34Atp6v1h10150-0.017-0.2354No
35Golga410167-0.017-0.2350No
36Sgms110233-0.020-0.2371No
37Sh3gl210296-0.022-0.2388No
38Rab5a10318-0.023-0.2383No
39Sod110747-0.036-0.2581No
40Ap2m111292-0.055-0.2827No
41Atp1a111293-0.055-0.2789No
42Ica111335-0.056-0.2772No
43Tmed1011386-0.058-0.2758No
44Pam11583-0.066-0.2815No
45Arfip111602-0.067-0.2779No
46Napg11756-0.071-0.2810No
47Arfgef112218-0.090-0.2988Yes
48Lman112296-0.092-0.2965Yes
49Bet112299-0.092-0.2904Yes
50Sec22b12327-0.093-0.2854Yes
51Stx712402-0.096-0.2827Yes
52Mon212493-0.099-0.2806Yes
53Atp7a12626-0.105-0.2803Yes
54Copb212629-0.105-0.2732Yes
55Scamp112707-0.109-0.2698Yes
56Clcn312785-0.111-0.2662Yes
57Kif1b12981-0.118-0.2683Yes
58Cope13189-0.125-0.2705Yes
59Zw1013240-0.127-0.2645Yes
60Stx1213381-0.133-0.2627Yes
61Ap3s113548-0.139-0.2619Yes
62Ap1g113744-0.147-0.2620Yes
63Ap2b113827-0.151-0.2559Yes
64Dop1a13850-0.152-0.2467Yes
65Uso113883-0.154-0.2379Yes
66Rab2a13945-0.157-0.2303Yes
67Rps6ka314101-0.162-0.2273Yes
68Ap3b114565-0.184-0.2388Yes
69Ppt114693-0.189-0.2326Yes
70Arf114878-0.198-0.2287Yes
71Arfgap314883-0.198-0.2154Yes
72Sec24d14896-0.199-0.2024Yes
73Galc14978-0.203-0.1928Yes
74Gbf115129-0.211-0.1862Yes
75M6pr15303-0.220-0.1802Yes
76Cltc15308-0.220-0.1654Yes
77Arcn115440-0.227-0.1568Yes
78Snx215785-0.244-0.1580Yes
79Rer115891-0.251-0.1463Yes
80Tmx115956-0.254-0.1323Yes
81Cln516272-0.275-0.1300Yes
82Lamp216408-0.284-0.1177Yes
83Dst16764-0.307-0.1152Yes
84Stx1616795-0.310-0.0956Yes
85Vamp317328-0.352-0.0992Yes
86Sspn17425-0.361-0.0796Yes
87Abca117531-0.369-0.0599Yes
88Bnip317652-0.381-0.0401Yes
89Tspan817893-0.405-0.0249Yes
90Stam18283-0.450-0.0144Yes
91Ap2s118284-0.4510.0164Yes
92Ctsc18752-0.5390.0289Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PROTEIN_SECRETION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PROTEIN_SECRETION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PROTEIN_SECRETION