DatasetMEP.MEP.mega_Pheno.cls
#Group1_versus_Group2.MEP.mega_Pheno.cls
#Group1_versus_Group2_repos
PhenotypeMEP.mega_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class1
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.3792884
Normalized Enrichment Score (NES)-1.409436
Nominal p-value0.10934394
FDR q-value0.95469344
FWER p-Value0.624
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Cd8691.0760.0290No
2Ifit312180.430-0.0223No
3Mx219870.351-0.0529No
4Il1520070.349-0.0443No
5Cd3821040.340-0.0400No
6Eif4e324270.315-0.0482No
7Slc25a2829210.283-0.0662No
8Usp1830140.278-0.0634No
9Tnfsf1031430.270-0.0627No
10Bank131600.269-0.0562No
11Vcam132010.266-0.0510No
12St8sia434030.253-0.0545No
13Casp734630.249-0.0508No
14Cxcl1035110.246-0.0465No
15Txnip36490.238-0.0472No
16Hif1a38480.227-0.0513No
17Ciita40690.215-0.0569No
18H2-Aa41070.213-0.0530No
19Ifi4442100.207-0.0526No
20Samhd142200.207-0.0474No
21Rbck143110.204-0.0465No
22Sod246280.188-0.0579No
23Psma347340.183-0.0584No
24Il10ra47700.181-0.0552No
25Rsad252470.159-0.0758No
26Cfb53810.153-0.0785No
27Eif2ak254920.148-0.0802No
28Wars155690.145-0.0802No
29Isg1555880.144-0.0772No
30Ripk259280.130-0.0914No
31Ccl559780.128-0.0904No
32Lap360030.127-0.0882No
33Ifit261360.122-0.0917No
34Arl4a61370.122-0.0884No
35Btg162850.117-0.0929No
36H2-DMa63720.114-0.0942No
37Irf864220.112-0.0937No
38Pfkp65080.109-0.0952No
39Psma265970.105-0.0969No
40Il766360.103-0.0961No
41Rapgef666440.103-0.0936No
42Plscr167410.099-0.0959No
43Irf767430.099-0.0933No
44St3gal568880.094-0.0982No
45Tdrd771550.084-0.1098No
46Irf272300.081-0.1115No
47Adar72440.081-0.1099No
48Fas72750.079-0.1093No
49Lcp273530.076-0.1112No
50Xaf174600.073-0.1148No
51Ripk176330.067-0.1219No
52Ncoa376770.066-0.1224No
53Pla2g4a77490.063-0.1244No
54Tnfaip277750.062-0.1240No
55Lgals3bp80730.051-0.1381No
56Pnp82780.044-0.1475No
57Socs184260.040-0.1541No
58Cdkn1a84340.040-0.1534No
59Rigi85200.037-0.1568No
60Jak285470.037-0.1571No
61Pml88010.028-0.1696No
62Trim2188140.027-0.1695No
63Samd9l89560.022-0.1763No
64Ptpn289940.021-0.1776No
65Cmtr191470.016-0.1851No
66Cmklr191800.015-0.1864No
67Pde4b93210.010-0.1934No
68Znfx194110.007-0.1979No
69Psme195030.004-0.2025No
70Ddx609661-0.000-0.2107No
71Tap19806-0.005-0.2181No
72Ptpn610132-0.016-0.2346No
73Stat110203-0.019-0.2378No
74Herc610501-0.028-0.2525No
75Sri10537-0.030-0.2535No
76Ifitm310568-0.031-0.2543No
77Rnf3110679-0.034-0.2591No
78Nup9310796-0.038-0.2641No
79Ube2l610829-0.040-0.2647No
80Ptpn110951-0.043-0.2698No
81Vamp810973-0.044-0.2697No
82Casp311057-0.047-0.2728No
83Cd27411095-0.048-0.2734No
84Lysmd211096-0.049-0.2721No
85Auts211164-0.051-0.2742No
86Sppl2a11178-0.051-0.2734No
87Socs311463-0.062-0.2866No
88Cmpk211584-0.066-0.2911No
89Mthfd211836-0.075-0.3021No
90Lats211960-0.080-0.3064No
91Trim2611985-0.081-0.3054No
92Oas312161-0.088-0.3121No
93Rnf21312262-0.090-0.3149No
94Il15ra12622-0.105-0.3307No
95Nmi12725-0.109-0.3331No
96Ifih112791-0.111-0.3334No
97Trim1413128-0.123-0.3476No
98Nampt13224-0.126-0.3491No
99Ifi2713302-0.129-0.3496No
100Isg2013329-0.131-0.3474No
101Nlrc513336-0.131-0.3441No
102Helz213397-0.133-0.3436No
103Fgl213470-0.136-0.3436No
104Parp1213533-0.138-0.3431No
105Ifi3513611-0.142-0.3432No
106Arid5b13939-0.157-0.3560No
107Casp814247-0.169-0.3674No
108Psme214288-0.171-0.3648No
109Peli114471-0.179-0.3694No
110Vamp514510-0.181-0.3665No
111Sp11014639-0.186-0.3681No
112Gch114855-0.196-0.3739Yes
113Nod114862-0.197-0.3688Yes
114Dhx5814920-0.200-0.3663Yes
115Irf514969-0.202-0.3633Yes
116Fcgr115118-0.211-0.3653Yes
117Oasl115304-0.220-0.3689Yes
118Psmb815309-0.220-0.3631Yes
119Ifnar215369-0.223-0.3601Yes
120Tor1b15666-0.239-0.3690Yes
121B2m15694-0.241-0.3638Yes
122Nfkb115723-0.242-0.3586Yes
123Il18bp15874-0.249-0.3596Yes
124Stat416086-0.264-0.3634Yes
125Stat216112-0.265-0.3575Yes
126Trim2516136-0.267-0.3514Yes
127Tapbp16140-0.267-0.3442Yes
128Gpr1816163-0.268-0.3380Yes
129Ly6e16179-0.269-0.3314Yes
130Nfkbia16280-0.275-0.3291Yes
131Bpgm16351-0.280-0.3251Yes
132Epsti116396-0.283-0.3197Yes
133Itgb716535-0.292-0.3189Yes
134Cd7416784-0.309-0.3234Yes
135Isoc116815-0.310-0.3165Yes
136Psmb216929-0.320-0.3136Yes
137Trafd117085-0.333-0.3126Yes
138Marchf117115-0.335-0.3049Yes
139Zbp117116-0.335-0.2957Yes
140Upp117127-0.337-0.2870Yes
141Parp1417180-0.342-0.2804Yes
142Casp117234-0.346-0.2737Yes
143Sspn17425-0.361-0.2737Yes
144Stat317440-0.363-0.2645Yes
145Bst217447-0.363-0.2549Yes
146Pim117541-0.370-0.2496Yes
147Mvp17556-0.372-0.2402Yes
148P2ry1417585-0.374-0.2314Yes
149Gbp317606-0.377-0.2221Yes
150Il4ra17887-0.404-0.2257Yes
151Pnpt118092-0.426-0.2247Yes
152Irf118157-0.434-0.2161Yes
153Rtp418443-0.474-0.2180Yes
154Tnfaip318481-0.480-0.2068Yes
155Myd8818515-0.490-0.1951Yes
156Psmb918521-0.492-0.1819Yes
157Cd4018670-0.520-0.1754Yes
158Batf218692-0.526-0.1621Yes
159Icam118721-0.534-0.1489Yes
160Oas218806-0.555-0.1381Yes
161Casp418909-0.583-0.1275Yes
162Selp18923-0.589-0.1120Yes
163Ifi3019018-0.627-0.0998Yes
164Psmb1019040-0.634-0.0835Yes
165Ifitm219057-0.643-0.0667Yes
166Irf919108-0.673-0.0509Yes
167Ogfr19165-0.727-0.0339Yes
168Cd6919181-0.739-0.0145Yes
169Il619208-0.7670.0052Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE