Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.mega_Pheno.cls #Group1_versus_Group2.MEP.mega_Pheno.cls #Group1_versus_Group2_repos
Phenotype	MEP.mega_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	-0.2726606
Normalized Enrichment Score (NES)	-1.0829729
Nominal p-value	0.3486974
FDR q-value	1.0
FWER p-Value	0.969

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Bgn	45	0.889	0.0222	No
2	Ak4	144	0.745	0.0376	No
3	Pdgfb	296	0.640	0.0474	No
4	Ddit4	301	0.639	0.0648	No
5	Cxcr4	481	0.571	0.0712	No
6	Sdc2	935	0.474	0.0606	No
7	Eno3	1165	0.437	0.0607	No
8	Adora2b	1357	0.412	0.0621	No
9	Hmox1	1498	0.398	0.0657	No
10	Dtna	1507	0.397	0.0763	No
11	Fosl2	1871	0.362	0.0673	No
12	Gpc1	1906	0.359	0.0754	No
13	Cav1	1907	0.359	0.0853	No
14	Cdkn1c	2083	0.342	0.0856	No
15	Noct	2852	0.288	0.0534	No
16	Tpi1	3244	0.263	0.0402	No
17	Rbpj	3273	0.261	0.0459	No
18	Angptl4	3352	0.256	0.0489	No
19	B3galt6	3390	0.254	0.0540	No
20	Glrx	3521	0.246	0.0540	No
21	Ppp1r15a	3669	0.237	0.0528	No
22	Ldha	3786	0.231	0.0532	No
23	Xpnpep1	3845	0.227	0.0564	No
24	Akap12	4087	0.215	0.0497	No
25	Pgm1	4140	0.212	0.0529	No
26	Nagk	4253	0.206	0.0527	No
27	Tpd52	4359	0.201	0.0527	No
28	Gcnt2	4547	0.192	0.0483	No
29	Pygm	4720	0.184	0.0444	No
30	Ppfia4	4786	0.180	0.0459	No
31	Slc2a5	5054	0.168	0.0366	No
32	Hexa	5078	0.167	0.0400	No
33	Cavin1	5101	0.166	0.0434	No
34	Dusp1	5219	0.160	0.0417	No
35	Cavin3	5330	0.155	0.0403	No
36	Hspa5	5397	0.152	0.0410	No
37	Prkca	5399	0.152	0.0451	No
38	Kif5a	5429	0.151	0.0478	No
39	Stbd1	5450	0.150	0.0509	No
40	Gpc4	5490	0.148	0.0529	No
41	Fam162a	5824	0.135	0.0392	No
42	S100a4	5996	0.127	0.0338	No
43	Fos	6145	0.122	0.0294	No
44	Rragd	6192	0.120	0.0303	No
45	Grhpr	6260	0.119	0.0301	No
46	Btg1	6285	0.117	0.0321	No
47	Pgk1	6351	0.114	0.0318	No
48	Pfkp	6508	0.109	0.0267	No
49	Bcl2	6683	0.101	0.0204	No
50	Pnrc1	6731	0.100	0.0207	No
51	Vhl	6863	0.095	0.0165	No
52	Inha	6932	0.092	0.0155	No
53	Zfp36	7012	0.089	0.0138	No
54	Scarb1	7182	0.083	0.0073	No
55	Jun	7239	0.081	0.0066	No
56	Nr3c1	7596	0.068	-0.0101	No
57	Pfkfb3	7608	0.068	-0.0088	No
58	Hk2	7613	0.068	-0.0072	No
59	Mif	7844	0.060	-0.0175	No
60	Pdk3	7991	0.054	-0.0237	No
61	Cp	8106	0.050	-0.0283	No
62	Klf7	8281	0.044	-0.0361	No
63	Cdkn1a	8434	0.040	-0.0429	No
64	Ids	8465	0.039	-0.0434	No
65	Ier3	8467	0.039	-0.0424	No
66	Sdc3	8472	0.039	-0.0416	No
67	Klhl24	8474	0.039	-0.0405	No
68	Nedd4l	8649	0.034	-0.0487	No
69	Pfkl	9298	0.011	-0.0822	No
70	Gpi1	9350	0.009	-0.0847	No
71	P4ha2	9355	0.009	-0.0846	No
72	Pdk1	9427	0.007	-0.0882	No
73	Bnip3l	9728	-0.002	-0.1038	No
74	Ets1	9765	-0.003	-0.1055	No
75	Selenbp1	10180	-0.018	-0.1267	No
76	Myh9	10197	-0.019	-0.1270	No
77	Irs2	10261	-0.021	-0.1297	No
78	Zfp292	10283	-0.021	-0.1302	No
79	Gpc3	10573	-0.031	-0.1445	No
80	Slc25a1	10604	-0.032	-0.1452	No
81	Prdx5	10729	-0.036	-0.1506	No
82	Slc6a6	10894	-0.041	-0.1581	No
83	Ankzf1	10959	-0.043	-0.1602	No
84	Cited2	10995	-0.044	-0.1608	No
85	Slc37a4	11048	-0.046	-0.1623	No
86	Tpst2	11074	-0.048	-0.1622	No
87	Foxo3	11167	-0.051	-0.1657	No
88	Lxn	11305	-0.055	-0.1713	No
89	Wsb1	11548	-0.065	-0.1821	No
90	Stc2	11554	-0.065	-0.1806	No
91	Pam	11583	-0.066	-0.1803	No
92	Ampd3	11684	-0.069	-0.1836	No
93	Gys1	11805	-0.073	-0.1878	No
94	Hdlbp	12026	-0.083	-0.1970	No
95	Eno1b	12067	-0.085	-0.1968	No
96	Tiparp	12217	-0.090	-0.2021	No
97	Eno2	12230	-0.090	-0.2002	No
98	Aldoa	12356	-0.094	-0.2041	No
99	Phkg1	12385	-0.095	-0.2030	No
100	Ugp2	12423	-0.097	-0.2023	No
101	Atp7a	12626	-0.105	-0.2099	No
102	Rora	12704	-0.109	-0.2109	No
103	Gaa	12757	-0.110	-0.2106	No
104	Mxi1	12822	-0.112	-0.2108	No
105	Ero1a	12987	-0.119	-0.2161	No
106	Atf3	12989	-0.119	-0.2129	No
107	Isg20	13329	-0.131	-0.2270	No
108	Cdkn1b	13407	-0.134	-0.2274	No
109	Kdelr3	13516	-0.137	-0.2292	No
110	P4ha1	13607	-0.142	-0.2300	No
111	Slc2a1	13859	-0.152	-0.2389	No
112	Siah2	14017	-0.160	-0.2427	No
113	Nfil3	14126	-0.163	-0.2438	No
114	Hs3st1	14227	-0.169	-0.2444	No
115	Hk1	14433	-0.178	-0.2502	No
116	Tgm2	14434	-0.178	-0.2453	No
117	Ndst1	14726	-0.190	-0.2553	No
118	Map3k1	14828	-0.195	-0.2552	No
119	Gbe1	14865	-0.197	-0.2516	No
120	Mt1	15046	-0.206	-0.2553	No
121	Csrp2	15247	-0.216	-0.2598	No
122	Gapdhs	15338	-0.221	-0.2584	No
123	Galk1	15612	-0.236	-0.2662	Yes
124	B4galnt2	15673	-0.240	-0.2627	Yes
125	Tmem45a	15700	-0.241	-0.2574	Yes
126	Tgfb3	15779	-0.244	-0.2547	Yes
127	Ndst2	15789	-0.244	-0.2485	Yes
128	Maff	15859	-0.248	-0.2452	Yes
129	Ddit3	15904	-0.251	-0.2406	Yes
130	Jmjd6	15958	-0.254	-0.2363	Yes
131	Kdm3a	15986	-0.256	-0.2307	Yes
132	Plin2	15999	-0.257	-0.2242	Yes
133	Ext1	16063	-0.262	-0.2203	Yes
134	Vegfa	16093	-0.264	-0.2145	Yes
135	Ndrg1	16188	-0.270	-0.2120	Yes
136	Errfi1	16306	-0.278	-0.2104	Yes
137	Bhlhe40	16341	-0.279	-0.2045	Yes
138	Pgm2	16413	-0.284	-0.2004	Yes
139	Slc2a3	16419	-0.284	-0.1928	Yes
140	Large1	16634	-0.299	-0.1957	Yes
141	Pklr	16683	-0.303	-0.1899	Yes
142	Anxa2	16822	-0.311	-0.1885	Yes
143	Sult2b1	16909	-0.317	-0.1843	Yes
144	Dcn	17214	-0.344	-0.1906	Yes
145	Tes	17446	-0.363	-0.1927	Yes
146	Pim1	17541	-0.370	-0.1874	Yes
147	Ccng2	17565	-0.373	-0.1783	Yes
148	Car12	17661	-0.382	-0.1727	Yes
149	Sap30	17699	-0.386	-0.1640	Yes
150	Gck	17738	-0.390	-0.1552	Yes
151	Fbp1	17777	-0.395	-0.1463	Yes
152	Tnfaip3	18481	-0.480	-0.1698	Yes
153	Klf6	18487	-0.482	-0.1567	Yes
154	Tgfbi	18597	-0.505	-0.1485	Yes
155	Casp6	18613	-0.509	-0.1353	Yes
156	Ilvbl	18744	-0.538	-0.1272	Yes
157	Aldoc	18799	-0.554	-0.1148	Yes
158	Col5a1	18965	-0.604	-0.1067	Yes
159	Il6	19208	-0.767	-0.0982	Yes
160	Vldlr	19237	-0.812	-0.0773	Yes
161	Plac8	19250	-0.837	-0.0548	Yes
162	Ppargc1a	19259	-0.865	-0.0314	Yes
163	Plaur	19303	-1.228	0.0002	Yes