DatasetMEP.MEP.ery_Pheno.cls
#Group6_versus_Group8.MEP.ery_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeMEP.ery_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.39362338
Normalized Enrichment Score (NES)-1.4174213
Nominal p-value0.14489795
FDR q-value0.2957719
FWER p-Value0.611
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Vcam13380.7120.0094No
2Irf87690.5830.0116No
3Ifit310100.5370.0193No
4Cfb10230.5350.0352No
5Fgl211130.5200.0479No
6Fas12040.5100.0602No
7Fpr119890.4220.0445No
8Tnfaip621440.4090.0514No
9Cd8623730.3900.0550No
10Ido136540.2990.0175No
11Lcp253930.214-0.0394No
12Auts258720.195-0.0508No
13Ncoa359690.192-0.0484No
14Pfkp60540.189-0.0457No
15Znfx166350.168-0.0617No
16Nup9367740.164-0.0617No
17Wars173560.145-0.0785No
18Cd4073830.144-0.0750No
19Rnf3180660.125-0.0961No
20Nod183140.119-0.1014No
21Marchf185420.113-0.1062No
22Bpgm91540.098-0.1255No
23St8sia493390.093-0.1294No
24Pla2g4a94000.092-0.1288No
25Socs194120.092-0.1264No
26Ifi3096560.086-0.1326No
27Irf498120.083-0.1357No
28Pde4b101790.075-0.1467No
29Pml102200.074-0.1459No
30Tdrd7103430.072-0.1482No
31Isg20103820.071-0.1474No
32Plscr1105520.068-0.1515No
33Casp7106230.066-0.1520No
34Eif2ak2107050.065-0.1530No
35Cd69107950.063-0.1543No
36Psma3109260.061-0.1572No
37Sspn112710.054-0.1681No
38Icam1117630.044-0.1846No
39Cmklr1117780.044-0.1838No
40Nampt118320.043-0.1844No
41Irf5122890.034-0.2000No
42Ripk2124380.031-0.2045No
43Cmtr1124860.030-0.2052No
44Ptpn2129210.023-0.2204No
45Ripk1129270.023-0.2199No
46Il15133110.016-0.2333No
47Ifit2135410.012-0.2413No
48Casp8137350.008-0.2481No
49Irf2138740.005-0.2530No
50Cd3814301-0.000-0.2685No
51Tnfaip314306-0.000-0.2687No
52Adar14909-0.011-0.2903No
53Tnfsf1015061-0.013-0.2954No
54Cdkn1a15145-0.015-0.2979No
55Psmb215244-0.017-0.3010No
56Peli115450-0.021-0.3078No
57Rapgef615682-0.025-0.3155No
58Il4ra15715-0.026-0.3159No
59Mthfd215730-0.026-0.3156No
60Pnpt115738-0.026-0.3150No
61Selp15870-0.029-0.3189No
62Samhd115916-0.030-0.3197No
63Mvp15996-0.031-0.3216No
64Trim2515999-0.031-0.3207No
65Ogfr16172-0.034-0.3260No
66Trim2116273-0.036-0.3285No
67Epsti116478-0.040-0.3347No
68Il716528-0.041-0.3352No
69Pim116904-0.049-0.3474No
70Sod217007-0.051-0.3496No
71C1s117030-0.051-0.3488No
72Ube2l617128-0.053-0.3507No
73St3gal517144-0.054-0.3496No
74Stat417152-0.054-0.3482No
75Casp117264-0.056-0.3506No
76Bank117279-0.056-0.3494No
77Stat317427-0.059-0.3529No
78Slc25a2817596-0.063-0.3571No
79Lats217605-0.063-0.3555No
80Pnp17627-0.063-0.3543No
81Fcgr117660-0.064-0.3536No
82Oas317709-0.065-0.3533No
83Socs317722-0.065-0.3517No
84Ptpn617821-0.068-0.3533No
85Sri17849-0.068-0.3522No
86Batf217933-0.070-0.3530No
87Il618091-0.074-0.3565No
88Hif1a18206-0.076-0.3583No
89Gch118260-0.077-0.3579No
90Arid5b18267-0.077-0.3558No
91Trafd118316-0.078-0.3551No
92Ptpn119175-0.099-0.3834No
93Rnf21319291-0.102-0.3845No
94Helz219309-0.102-0.3820No
95Eif4e319347-0.103-0.3802No
96Dhx5819717-0.112-0.3902Yes
97Trim2619728-0.113-0.3871Yes
98Jak219871-0.115-0.3888Yes
99Lap319998-0.118-0.3897Yes
100Rbck120059-0.119-0.3883Yes
101Ifitm220117-0.120-0.3867Yes
102Ifih120142-0.121-0.3839Yes
103Arl4a20297-0.125-0.3857Yes
104Psma220376-0.127-0.3846Yes
105Herc620382-0.127-0.3809Yes
106Ifnar220432-0.128-0.3788Yes
107Vamp520709-0.137-0.3847Yes
108Samd9l20728-0.137-0.3811Yes
109Lysmd220947-0.143-0.3847Yes
110Ifi3521150-0.149-0.3875Yes
111Il10ra21152-0.149-0.3830Yes
112Il15ra21223-0.152-0.3809Yes
113Parp1421297-0.154-0.3788Yes
114Isoc121362-0.156-0.3764Yes
115Txnip21520-0.160-0.3772Yes
116Gpr1821523-0.161-0.3724Yes
117Slamf721526-0.161-0.3676Yes
118Nfkbia21570-0.162-0.3642Yes
119Lgals3bp21688-0.166-0.3633Yes
120Nfkb121874-0.173-0.3648Yes
121Sppl2a21949-0.175-0.3622Yes
122H2-DMa21950-0.175-0.3568Yes
123Ifi2722026-0.176-0.3542Yes
124Btg122256-0.184-0.3569Yes
125Casp322398-0.190-0.3562Yes
126Stat222429-0.191-0.3515Yes
127Oasl122674-0.200-0.3542Yes
128Casp422935-0.210-0.3573Yes
129Ciita23034-0.214-0.3543Yes
130Tor1b23205-0.221-0.3538Yes
131Mx223297-0.224-0.3502Yes
132Ccl523346-0.226-0.3451Yes
133Il18bp23452-0.231-0.3418Yes
134Itgb723467-0.232-0.3352Yes
135Tnfaip223477-0.233-0.3285Yes
136Trim1423514-0.234-0.3226Yes
137Cfh23539-0.235-0.3163Yes
138Nlrc523559-0.236-0.3098Yes
139Sp11023615-0.239-0.3045Yes
140Stat123797-0.246-0.3035Yes
141Oas224041-0.258-0.3045Yes
142Rsad224060-0.259-0.2972Yes
143Zbp124312-0.270-0.2981Yes
144Usp1824404-0.275-0.2930Yes
145Xaf124521-0.281-0.2887Yes
146Il2rb24590-0.284-0.2825Yes
147Vamp824719-0.290-0.2783Yes
148Upp124751-0.292-0.2705Yes
149Nmi24795-0.294-0.2630Yes
150Parp1224886-0.299-0.2572Yes
151H2-Aa24969-0.304-0.2509Yes
152Rigi25071-0.310-0.2450Yes
153Irf925389-0.332-0.2465Yes
154Cmpk225391-0.332-0.2363Yes
155Psmb1025434-0.334-0.2276Yes
156Psmb925446-0.335-0.2178Yes
157Cxcl1025631-0.349-0.2138Yes
158Tapbp25728-0.356-0.2064Yes
159Cd27425773-0.360-0.1970Yes
160Gbp325791-0.361-0.1866Yes
161Psme225820-0.364-0.1765Yes
162Tap125947-0.376-0.1696Yes
163Irf726071-0.386-0.1623Yes
164Bst226183-0.397-0.1542Yes
165Psme126292-0.410-0.1456Yes
166Ly6e26304-0.411-0.1334Yes
167Psmb826377-0.420-0.1232Yes
168Serping126444-0.428-0.1125Yes
169B2m26518-0.438-0.1018Yes
170Ifitm326602-0.450-0.0910Yes
171Ddx6026646-0.455-0.0787Yes
172Cd7426686-0.462-0.0660Yes
173P2ry1426810-0.481-0.0558Yes
174Ifi4427018-0.522-0.0473Yes
175Isg1527096-0.540-0.0336Yes
176Irf127131-0.551-0.0180Yes
177Myd8827166-0.561-0.0021Yes
178Rtp427238-0.5880.0133Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE