DatasetMEP.MEP.ery_Pheno.cls
#Group6_versus_Group8.MEP.ery_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeMEP.ery_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_DNA_REPAIR
Enrichment Score (ES)-0.31951353
Normalized Enrichment Score (NES)-1.6359124
Nominal p-value0.08367347
FDR q-value0.4969413
FWER p-Value0.275
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_DNA_REPAIR   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Npr21830.8080.0375No
2Polr2k25310.378-0.0273No
3Cda39630.282-0.0640No
4Polr2a42760.264-0.0609No
5Ercc143520.260-0.0494No
6Ddb151620.223-0.0667No
7Bcam53480.214-0.0617No
8Taf1060030.191-0.0751No
9Supt4a64950.173-0.0835No
10Sec61a168510.161-0.0876No
11Pola270880.154-0.0878No
12Dgcr882850.120-0.1248No
13Mpc284080.116-0.1229No
14Pom12187220.108-0.1284No
15Snapc488840.104-0.1285No
16Ercc291670.097-0.1335No
17Stx393310.093-0.1343No
18Polh94170.091-0.1324No
19Gmpr295800.089-0.1335No
20Pcna97010.085-0.1332No
21Pola199200.081-0.1367No
22Alyref100490.078-0.1371No
23Pde4b101790.075-0.1377No
24Nfx1102700.073-0.1370No
25Ell104130.070-0.1383No
26Supt5111870.055-0.1634No
27Smad5113420.052-0.1662No
28Cstf3113470.052-0.1635No
29Polr1d116770.046-0.1730No
30Ercc3117580.044-0.1734No
31Ercc4119030.042-0.1764No
32Taf13120170.039-0.1784No
33Sdcbp122290.035-0.1841No
34Sac3d1122740.034-0.1838No
35Polr2c124170.031-0.1873No
36Trp53124450.031-0.1866No
37Rev3l124870.030-0.1864No
38Gtf2b131880.018-0.2109No
39Pold1132020.018-0.2105No
40Rnmt132380.017-0.2108No
41Rad51132560.017-0.2105No
42Nt5c3132950.016-0.2110No
43Gtf2h1133630.015-0.2126No
44Ada134320.013-0.2144No
45Ercc8134630.013-0.2148No
46Rad52135880.011-0.2187No
47Poll136710.009-0.2212No
48Lig1140060.003-0.2332No
49Itpa140300.003-0.2339No
50Ercc514737-0.008-0.2592No
51Tarbp214778-0.008-0.2602No
52Mpg14911-0.011-0.2644No
53Ddb214997-0.012-0.2668No
54Gtf3c515193-0.016-0.2730No
55Polr3gl15267-0.017-0.2747No
56Nelfcd15345-0.019-0.2765No
57Taf615451-0.021-0.2792No
58Zwint15564-0.023-0.2820No
59Gsdme15614-0.024-0.2825No
60Rae115691-0.025-0.2839No
61Polr3c15950-0.030-0.2916No
62Tk216135-0.034-0.2965No
63Taf1c16402-0.039-0.3040No
64Nelfe16473-0.040-0.3044No
65Eloa16501-0.041-0.3031No
66Clp116633-0.044-0.3055No
67Adcy616852-0.048-0.3109No
68Hcls116893-0.048-0.3097No
69Gtf2h516910-0.049-0.3076No
70Xpc17047-0.052-0.3097No
71Rfc517063-0.052-0.3074No
72Taf1217080-0.052-0.3052No
73Brf217083-0.052-0.3024No
74Tyms17103-0.053-0.3002No
75Usp1117255-0.056-0.3026No
76Tsg10117512-0.061-0.3086No
77Ssrp117539-0.062-0.3062No
78Pnp17627-0.063-0.3059No
79Upf3b17704-0.065-0.3051No
80Polr1h17908-0.070-0.3087No
81Ncbp218160-0.075-0.3137No
82Rfc218205-0.076-0.3112No
83Srsf618371-0.080-0.3128No
84Umps18373-0.080-0.3085No
85Vps37b18493-0.083-0.3083No
86Nme318802-0.089-0.3146Yes
87Prim118869-0.091-0.3121Yes
88Pole419013-0.095-0.3121Yes
89Rfc319123-0.098-0.3107Yes
90Polb19263-0.101-0.3103Yes
91Adrm119295-0.102-0.3058Yes
92Cox1719440-0.105-0.3053Yes
93Ago419458-0.106-0.3002Yes
94Snapc519489-0.107-0.2954Yes
95Aprt19566-0.108-0.2923Yes
96Cant119777-0.114-0.2937Yes
97Ak319860-0.115-0.2904Yes
98Mrpl4019868-0.115-0.2844Yes
99Nme120037-0.119-0.2840Yes
100Pold420042-0.119-0.2776Yes
101Zfp70720173-0.122-0.2757Yes
102Pold320219-0.123-0.2706Yes
103Gtf2a220304-0.125-0.2668Yes
104Rala20337-0.126-0.2611Yes
105Gtf2h320374-0.127-0.2555Yes
106Polr2d20389-0.127-0.2490Yes
107Aaas20679-0.136-0.2521Yes
108Rfc420713-0.137-0.2459Yes
109Nudt2120773-0.138-0.2404Yes
110Polr1c20837-0.140-0.2351Yes
111Bcap3120870-0.141-0.2285Yes
112Gtf2f120939-0.143-0.2232Yes
113Nelfb21116-0.148-0.2215Yes
114Eif1b21402-0.157-0.2233Yes
115Polr2h21444-0.158-0.2162Yes
116Polr2f21577-0.162-0.2121Yes
117Dut21579-0.162-0.2033Yes
118Dad121668-0.165-0.1975Yes
119Nt5c21824-0.171-0.1938Yes
120Taf921847-0.172-0.1852Yes
121Rbx121958-0.175-0.1796Yes
122Gpx422143-0.180-0.1765Yes
123Dctn422524-0.195-0.1796Yes
124Nudt922532-0.195-0.1692Yes
125Dguok22636-0.199-0.1621Yes
126Impdh222645-0.199-0.1515Yes
127Surf123039-0.214-0.1541Yes
128Polr2j23040-0.214-0.1424Yes
129Edf123099-0.216-0.1327Yes
130Sf3a323202-0.221-0.1244Yes
131Rpa323274-0.223-0.1147Yes
132Cetn223308-0.225-0.1036Yes
133Rpa223375-0.228-0.0936Yes
134Polr2i23962-0.254-0.1010Yes
135Arl6ip124139-0.262-0.0931Yes
136Polr2e24154-0.262-0.0793Yes
137Vps2824620-0.286-0.0806Yes
138Fen124901-0.300-0.0744Yes
139Cmpk225391-0.332-0.0741Yes
140Rrm2b25423-0.334-0.0570Yes
141Guk125497-0.339-0.0411Yes
142Polr2g25770-0.359-0.0313Yes
143Ak125860-0.369-0.0144Yes
144Pde6g26714-0.466-0.0200Yes
145Ccno26750-0.4720.0045Yes
146Nme426836-0.4840.0279Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_DNA_REPAIR   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_DNA_REPAIR: Random ES distribution   
Gene set null distribution of ES for HALLMARK_DNA_REPAIR