| Dataset | MEP.MEP.ery_Pheno.cls #Group6_versus_Group8.MEP.ery_Pheno.cls #Group6_versus_Group8_repos |
| Phenotype | MEP.ery_Pheno.cls#Group6_versus_Group8_repos |
| Upregulated in class | 5 |
| GeneSet | HALLMARK_DNA_REPAIR |
| Enrichment Score (ES) | -0.31951353 |
| Normalized Enrichment Score (NES) | -1.6359124 |
| Nominal p-value | 0.08367347 |
| FDR q-value | 0.4969413 |
| FWER p-Value | 0.275 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Npr2 | 183 | 0.808 | 0.0375 | No |
| 2 | Polr2k | 2531 | 0.378 | -0.0273 | No |
| 3 | Cda | 3963 | 0.282 | -0.0640 | No |
| 4 | Polr2a | 4276 | 0.264 | -0.0609 | No |
| 5 | Ercc1 | 4352 | 0.260 | -0.0494 | No |
| 6 | Ddb1 | 5162 | 0.223 | -0.0667 | No |
| 7 | Bcam | 5348 | 0.214 | -0.0617 | No |
| 8 | Taf10 | 6003 | 0.191 | -0.0751 | No |
| 9 | Supt4a | 6495 | 0.173 | -0.0835 | No |
| 10 | Sec61a1 | 6851 | 0.161 | -0.0876 | No |
| 11 | Pola2 | 7088 | 0.154 | -0.0878 | No |
| 12 | Dgcr8 | 8285 | 0.120 | -0.1248 | No |
| 13 | Mpc2 | 8408 | 0.116 | -0.1229 | No |
| 14 | Pom121 | 8722 | 0.108 | -0.1284 | No |
| 15 | Snapc4 | 8884 | 0.104 | -0.1285 | No |
| 16 | Ercc2 | 9167 | 0.097 | -0.1335 | No |
| 17 | Stx3 | 9331 | 0.093 | -0.1343 | No |
| 18 | Polh | 9417 | 0.091 | -0.1324 | No |
| 19 | Gmpr2 | 9580 | 0.089 | -0.1335 | No |
| 20 | Pcna | 9701 | 0.085 | -0.1332 | No |
| 21 | Pola1 | 9920 | 0.081 | -0.1367 | No |
| 22 | Alyref | 10049 | 0.078 | -0.1371 | No |
| 23 | Pde4b | 10179 | 0.075 | -0.1377 | No |
| 24 | Nfx1 | 10270 | 0.073 | -0.1370 | No |
| 25 | Ell | 10413 | 0.070 | -0.1383 | No |
| 26 | Supt5 | 11187 | 0.055 | -0.1634 | No |
| 27 | Smad5 | 11342 | 0.052 | -0.1662 | No |
| 28 | Cstf3 | 11347 | 0.052 | -0.1635 | No |
| 29 | Polr1d | 11677 | 0.046 | -0.1730 | No |
| 30 | Ercc3 | 11758 | 0.044 | -0.1734 | No |
| 31 | Ercc4 | 11903 | 0.042 | -0.1764 | No |
| 32 | Taf13 | 12017 | 0.039 | -0.1784 | No |
| 33 | Sdcbp | 12229 | 0.035 | -0.1841 | No |
| 34 | Sac3d1 | 12274 | 0.034 | -0.1838 | No |
| 35 | Polr2c | 12417 | 0.031 | -0.1873 | No |
| 36 | Trp53 | 12445 | 0.031 | -0.1866 | No |
| 37 | Rev3l | 12487 | 0.030 | -0.1864 | No |
| 38 | Gtf2b | 13188 | 0.018 | -0.2109 | No |
| 39 | Pold1 | 13202 | 0.018 | -0.2105 | No |
| 40 | Rnmt | 13238 | 0.017 | -0.2108 | No |
| 41 | Rad51 | 13256 | 0.017 | -0.2105 | No |
| 42 | Nt5c3 | 13295 | 0.016 | -0.2110 | No |
| 43 | Gtf2h1 | 13363 | 0.015 | -0.2126 | No |
| 44 | Ada | 13432 | 0.013 | -0.2144 | No |
| 45 | Ercc8 | 13463 | 0.013 | -0.2148 | No |
| 46 | Rad52 | 13588 | 0.011 | -0.2187 | No |
| 47 | Poll | 13671 | 0.009 | -0.2212 | No |
| 48 | Lig1 | 14006 | 0.003 | -0.2332 | No |
| 49 | Itpa | 14030 | 0.003 | -0.2339 | No |
| 50 | Ercc5 | 14737 | -0.008 | -0.2592 | No |
| 51 | Tarbp2 | 14778 | -0.008 | -0.2602 | No |
| 52 | Mpg | 14911 | -0.011 | -0.2644 | No |
| 53 | Ddb2 | 14997 | -0.012 | -0.2668 | No |
| 54 | Gtf3c5 | 15193 | -0.016 | -0.2730 | No |
| 55 | Polr3gl | 15267 | -0.017 | -0.2747 | No |
| 56 | Nelfcd | 15345 | -0.019 | -0.2765 | No |
| 57 | Taf6 | 15451 | -0.021 | -0.2792 | No |
| 58 | Zwint | 15564 | -0.023 | -0.2820 | No |
| 59 | Gsdme | 15614 | -0.024 | -0.2825 | No |
| 60 | Rae1 | 15691 | -0.025 | -0.2839 | No |
| 61 | Polr3c | 15950 | -0.030 | -0.2916 | No |
| 62 | Tk2 | 16135 | -0.034 | -0.2965 | No |
| 63 | Taf1c | 16402 | -0.039 | -0.3040 | No |
| 64 | Nelfe | 16473 | -0.040 | -0.3044 | No |
| 65 | Eloa | 16501 | -0.041 | -0.3031 | No |
| 66 | Clp1 | 16633 | -0.044 | -0.3055 | No |
| 67 | Adcy6 | 16852 | -0.048 | -0.3109 | No |
| 68 | Hcls1 | 16893 | -0.048 | -0.3097 | No |
| 69 | Gtf2h5 | 16910 | -0.049 | -0.3076 | No |
| 70 | Xpc | 17047 | -0.052 | -0.3097 | No |
| 71 | Rfc5 | 17063 | -0.052 | -0.3074 | No |
| 72 | Taf12 | 17080 | -0.052 | -0.3052 | No |
| 73 | Brf2 | 17083 | -0.052 | -0.3024 | No |
| 74 | Tyms | 17103 | -0.053 | -0.3002 | No |
| 75 | Usp11 | 17255 | -0.056 | -0.3026 | No |
| 76 | Tsg101 | 17512 | -0.061 | -0.3086 | No |
| 77 | Ssrp1 | 17539 | -0.062 | -0.3062 | No |
| 78 | Pnp | 17627 | -0.063 | -0.3059 | No |
| 79 | Upf3b | 17704 | -0.065 | -0.3051 | No |
| 80 | Polr1h | 17908 | -0.070 | -0.3087 | No |
| 81 | Ncbp2 | 18160 | -0.075 | -0.3137 | No |
| 82 | Rfc2 | 18205 | -0.076 | -0.3112 | No |
| 83 | Srsf6 | 18371 | -0.080 | -0.3128 | No |
| 84 | Umps | 18373 | -0.080 | -0.3085 | No |
| 85 | Vps37b | 18493 | -0.083 | -0.3083 | No |
| 86 | Nme3 | 18802 | -0.089 | -0.3146 | Yes |
| 87 | Prim1 | 18869 | -0.091 | -0.3121 | Yes |
| 88 | Pole4 | 19013 | -0.095 | -0.3121 | Yes |
| 89 | Rfc3 | 19123 | -0.098 | -0.3107 | Yes |
| 90 | Polb | 19263 | -0.101 | -0.3103 | Yes |
| 91 | Adrm1 | 19295 | -0.102 | -0.3058 | Yes |
| 92 | Cox17 | 19440 | -0.105 | -0.3053 | Yes |
| 93 | Ago4 | 19458 | -0.106 | -0.3002 | Yes |
| 94 | Snapc5 | 19489 | -0.107 | -0.2954 | Yes |
| 95 | Aprt | 19566 | -0.108 | -0.2923 | Yes |
| 96 | Cant1 | 19777 | -0.114 | -0.2937 | Yes |
| 97 | Ak3 | 19860 | -0.115 | -0.2904 | Yes |
| 98 | Mrpl40 | 19868 | -0.115 | -0.2844 | Yes |
| 99 | Nme1 | 20037 | -0.119 | -0.2840 | Yes |
| 100 | Pold4 | 20042 | -0.119 | -0.2776 | Yes |
| 101 | Zfp707 | 20173 | -0.122 | -0.2757 | Yes |
| 102 | Pold3 | 20219 | -0.123 | -0.2706 | Yes |
| 103 | Gtf2a2 | 20304 | -0.125 | -0.2668 | Yes |
| 104 | Rala | 20337 | -0.126 | -0.2611 | Yes |
| 105 | Gtf2h3 | 20374 | -0.127 | -0.2555 | Yes |
| 106 | Polr2d | 20389 | -0.127 | -0.2490 | Yes |
| 107 | Aaas | 20679 | -0.136 | -0.2521 | Yes |
| 108 | Rfc4 | 20713 | -0.137 | -0.2459 | Yes |
| 109 | Nudt21 | 20773 | -0.138 | -0.2404 | Yes |
| 110 | Polr1c | 20837 | -0.140 | -0.2351 | Yes |
| 111 | Bcap31 | 20870 | -0.141 | -0.2285 | Yes |
| 112 | Gtf2f1 | 20939 | -0.143 | -0.2232 | Yes |
| 113 | Nelfb | 21116 | -0.148 | -0.2215 | Yes |
| 114 | Eif1b | 21402 | -0.157 | -0.2233 | Yes |
| 115 | Polr2h | 21444 | -0.158 | -0.2162 | Yes |
| 116 | Polr2f | 21577 | -0.162 | -0.2121 | Yes |
| 117 | Dut | 21579 | -0.162 | -0.2033 | Yes |
| 118 | Dad1 | 21668 | -0.165 | -0.1975 | Yes |
| 119 | Nt5c | 21824 | -0.171 | -0.1938 | Yes |
| 120 | Taf9 | 21847 | -0.172 | -0.1852 | Yes |
| 121 | Rbx1 | 21958 | -0.175 | -0.1796 | Yes |
| 122 | Gpx4 | 22143 | -0.180 | -0.1765 | Yes |
| 123 | Dctn4 | 22524 | -0.195 | -0.1796 | Yes |
| 124 | Nudt9 | 22532 | -0.195 | -0.1692 | Yes |
| 125 | Dguok | 22636 | -0.199 | -0.1621 | Yes |
| 126 | Impdh2 | 22645 | -0.199 | -0.1515 | Yes |
| 127 | Surf1 | 23039 | -0.214 | -0.1541 | Yes |
| 128 | Polr2j | 23040 | -0.214 | -0.1424 | Yes |
| 129 | Edf1 | 23099 | -0.216 | -0.1327 | Yes |
| 130 | Sf3a3 | 23202 | -0.221 | -0.1244 | Yes |
| 131 | Rpa3 | 23274 | -0.223 | -0.1147 | Yes |
| 132 | Cetn2 | 23308 | -0.225 | -0.1036 | Yes |
| 133 | Rpa2 | 23375 | -0.228 | -0.0936 | Yes |
| 134 | Polr2i | 23962 | -0.254 | -0.1010 | Yes |
| 135 | Arl6ip1 | 24139 | -0.262 | -0.0931 | Yes |
| 136 | Polr2e | 24154 | -0.262 | -0.0793 | Yes |
| 137 | Vps28 | 24620 | -0.286 | -0.0806 | Yes |
| 138 | Fen1 | 24901 | -0.300 | -0.0744 | Yes |
| 139 | Cmpk2 | 25391 | -0.332 | -0.0741 | Yes |
| 140 | Rrm2b | 25423 | -0.334 | -0.0570 | Yes |
| 141 | Guk1 | 25497 | -0.339 | -0.0411 | Yes |
| 142 | Polr2g | 25770 | -0.359 | -0.0313 | Yes |
| 143 | Ak1 | 25860 | -0.369 | -0.0144 | Yes |
| 144 | Pde6g | 26714 | -0.466 | -0.0200 | Yes |
| 145 | Ccno | 26750 | -0.472 | 0.0045 | Yes |
| 146 | Nme4 | 26836 | -0.484 | 0.0279 | Yes |

