Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group6_versus_Group8.MEP.ery_Pheno.cls #Group6_versus_Group8_repos
Phenotype	MEP.ery_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	4
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	0.25060996
Normalized Enrichment Score (NES)	0.9612519
Nominal p-value	0.4502924
FDR q-value	0.7417967
FWER p-Value	0.982

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Thy1	13	1.189	0.0353	Yes
2	Nos2	448	0.672	0.0396	Yes
3	Tlr6	465	0.665	0.0591	Yes
4	Ccr5	693	0.602	0.0689	Yes
5	Apbb1	724	0.594	0.0856	Yes
6	Irf8	769	0.583	0.1016	Yes
7	Elane	848	0.563	0.1157	Yes
8	Il18	1031	0.534	0.1251	Yes
9	Gpr65	1140	0.517	0.1367	Yes
10	Fas	1204	0.510	0.1498	Yes
11	Il2rg	1446	0.481	0.1554	Yes
12	Cd3e	1682	0.453	0.1605	Yes
13	Cd1d2	1770	0.444	0.1707	Yes
14	Igsf6	1814	0.440	0.1823	Yes
15	Fcgr2b	2097	0.412	0.1844	Yes
16	Ncr1	2152	0.408	0.1948	Yes
17	Prkcg	2170	0.407	0.2064	Yes
18	Il11	2210	0.403	0.2171	Yes
19	Cd86	2373	0.390	0.2229	Yes
20	Il2ra	2419	0.386	0.2328	Yes
21	Cd247	2607	0.374	0.2373	Yes
22	Inhba	2830	0.356	0.2399	Yes
23	Il1b	3214	0.328	0.2358	Yes
24	Il18rap	3463	0.310	0.2360	Yes
25	Itgal	3712	0.295	0.2359	Yes
26	F2	4150	0.271	0.2281	Yes
27	Cd3g	4222	0.268	0.2335	Yes
28	Ly86	4334	0.261	0.2374	Yes
29	Lck	4384	0.258	0.2433	Yes
30	Ccr1	4397	0.257	0.2506	Yes
31	Spi1	4665	0.245	0.2482	No
32	Il12a	4852	0.237	0.2486	No
33	Cfp	5316	0.216	0.2382	No
34	Lcp2	5393	0.214	0.2419	No
35	Fasl	5544	0.207	0.2426	No
36	Stab1	6585	0.170	0.2098	No
37	Ets1	6747	0.165	0.2089	No
38	H2-DMb2	7073	0.155	0.2017	No
39	Cd79a	7161	0.151	0.2031	No
40	Wars1	7356	0.145	0.2004	No
41	Cd3d	7382	0.144	0.2038	No
42	Cd40	7383	0.144	0.2081	No
43	Tnf	7491	0.141	0.2085	No
44	Eif3a	7781	0.132	0.2019	No
45	Il12rb1	7802	0.132	0.2051	No
46	Tpd52	8146	0.124	0.1964	No
47	Icosl	8162	0.123	0.1995	No
48	Ube2n	8379	0.117	0.1952	No
49	Csf1	8597	0.111	0.1906	No
50	Cd7	9278	0.095	0.1687	No
51	St8sia4	9339	0.093	0.1693	No
52	Socs1	9412	0.092	0.1694	No
53	Fgr	9654	0.086	0.1632	No
54	Ache	9690	0.086	0.1645	No
55	Irf4	9812	0.083	0.1626	No
56	Cd40lg	10024	0.078	0.1573	No
57	Bcat1	10184	0.075	0.1537	No
58	Tgfb1	10638	0.066	0.1392	No
59	Eif4g3	10746	0.064	0.1372	No
60	Prkcb	10818	0.062	0.1365	No
61	Ncf4	10936	0.060	0.1341	No
62	Traf2	11267	0.054	0.1237	No
63	Ikbkb	11382	0.051	0.1210	No
64	Icam1	11763	0.044	0.1085	No
65	Gcnt1	11866	0.042	0.1061	No
66	Map3k7	12011	0.040	0.1020	No
67	Gzmb	12052	0.039	0.1017	No
68	Elf4	12090	0.038	0.1015	No
69	Ripk2	12438	0.031	0.0898	No
70	Itk	12647	0.027	0.0831	No
71	Ccnd3	12685	0.027	0.0825	No
72	Socs5	13183	0.018	0.0649	No
73	Ccr2	13247	0.017	0.0632	No
74	Flna	13262	0.017	0.0631	No
75	Ube2d1	13280	0.016	0.0630	No
76	Il15	13311	0.016	0.0624	No
77	Timp1	13352	0.015	0.0614	No
78	Abce1	13361	0.015	0.0615	No
79	Tap2	13461	0.013	0.0583	No
80	Il16	13512	0.012	0.0569	No
81	Cd2	13525	0.012	0.0568	No
82	Dyrk3	13699	0.008	0.0507	No
83	Lif	13702	0.008	0.0509	No
84	Tlr2	14117	0.001	0.0358	No
85	Tgfb2	14561	-0.005	0.0198	No
86	Il10	14585	-0.005	0.0192	No
87	Lyn	14709	-0.007	0.0149	No
88	Brca1	15012	-0.013	0.0043	No
89	Galnt1	15245	-0.017	-0.0037	No
90	Nlrp3	15322	-0.018	-0.0059	No
91	Egfr	15491	-0.022	-0.0114	No
92	Ereg	15588	-0.023	-0.0142	No
93	Il4ra	15715	-0.026	-0.0180	No
94	Zap70	15968	-0.031	-0.0263	No
95	Abi1	16177	-0.034	-0.0328	No
96	Il7	16528	-0.041	-0.0443	No
97	Hcls1	16893	-0.048	-0.0561	No
98	Eif3d	17002	-0.051	-0.0585	No
99	Ptprc	17033	-0.051	-0.0581	No
100	Stat4	17152	-0.054	-0.0608	No
101	Cd28	17377	-0.058	-0.0672	No
102	Csk	17807	-0.067	-0.0808	No
103	Ptpn6	17821	-0.068	-0.0792	No
104	Tlr1	18035	-0.072	-0.0848	No
105	Il6	18091	-0.074	-0.0846	No
106	F2r	18111	-0.074	-0.0831	No
107	Cd47	18166	-0.075	-0.0828	No
108	Map4k1	18167	-0.075	-0.0805	No
109	Hif1a	18206	-0.076	-0.0797	No
110	Nck1	18207	-0.076	-0.0774	No
111	Il27ra	18393	-0.081	-0.0817	No
112	Mmp9	18504	-0.083	-0.0832	No
113	H2-Ob	18663	-0.087	-0.0863	No
114	Ifngr2	18749	-0.088	-0.0868	No
115	Akt1	18892	-0.092	-0.0892	No
116	Mrpl3	19163	-0.099	-0.0961	No
117	Cd4	19442	-0.105	-0.1030	No
118	Cd96	19533	-0.108	-0.1031	No
119	Srgn	19798	-0.114	-0.1093	No
120	Mtif2	19853	-0.115	-0.1078	No
121	Jak2	19871	-0.115	-0.1049	No
122	Nme1	20037	-0.119	-0.1074	No
123	Npm1	20063	-0.119	-0.1047	No
124	Was	20274	-0.124	-0.1086	No
125	Ifnar2	20432	-0.128	-0.1105	No
126	Bcl3	20649	-0.135	-0.1143	No
127	Itgb2	20681	-0.136	-0.1114	No
128	Acvr2a	20847	-0.140	-0.1132	No
129	Il4	21162	-0.150	-0.1201	No
130	Eif3j1	21299	-0.154	-0.1204	No
131	H2-DMa	21950	-0.175	-0.1389	No
132	Eif5a	22179	-0.181	-0.1417	No
133	Ccnd2	22310	-0.186	-0.1409	No
134	Ly75	22465	-0.193	-0.1407	No
135	Bcl10	22479	-0.193	-0.1354	No
136	Hdac9	23013	-0.213	-0.1484	No
137	Ifngr1	23082	-0.216	-0.1444	No
138	H2-Oa	23096	-0.216	-0.1383	No
139	Klrd1	23120	-0.217	-0.1326	No
140	Ccl5	23346	-0.226	-0.1340	No
141	C2	23415	-0.230	-0.1296	No
142	Cdkn2a	23521	-0.234	-0.1264	No
143	Rpl9	23688	-0.242	-0.1252	No
144	Stat1	23797	-0.246	-0.1217	No
145	Il2	23830	-0.248	-0.1154	No
146	Rps9	23939	-0.253	-0.1117	No
147	Glmn	23959	-0.254	-0.1048	No
148	Rps3a1	24083	-0.260	-0.1015	No
149	Trat1	24138	-0.261	-0.0956	No
150	Pf4	24184	-0.264	-0.0893	No
151	Il2rb	24590	-0.284	-0.0955	No
152	Tlr3	24692	-0.289	-0.0905	No
153	H2-Aa	24969	-0.304	-0.0914	No
154	Ltb	25307	-0.325	-0.0939	No
155	Psmb10	25434	-0.334	-0.0884	No
156	Degs1	25622	-0.348	-0.0848	No
157	Tapbp	25728	-0.356	-0.0779	No
158	Prf1	25811	-0.363	-0.0700	No
159	Tap1	25947	-0.376	-0.0636	No
160	Irf7	26071	-0.386	-0.0565	No
161	Crtam	26162	-0.395	-0.0479	No
162	Capg	26194	-0.398	-0.0370	No
163	B2m	26518	-0.438	-0.0356	No
164	Cd80	26643	-0.455	-0.0265	No
165	Cd74	26686	-0.462	-0.0141	No
166	Ctss	26902	-0.495	-0.0071	No
167	Rpl3l	27068	-0.533	0.0029	No
168	Rpl39-ps	27125	-0.549	0.0174	No