| Dataset | MEP.MEP.ery_Pheno.cls #Group3_versus_Group4.MEP.ery_Pheno.cls #Group3_versus_Group4_repos |
| Phenotype | MEP.ery_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_TGF_BETA_SIGNALING |
| Enrichment Score (ES) | -0.22396024 |
| Normalized Enrichment Score (NES) | -0.7506834 |
| Nominal p-value | 0.72121215 |
| FDR q-value | 0.94505525 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Id1 | 1786 | 0.470 | -0.0077 | No |
| 2 | Fkbp1a | 2510 | 0.417 | 0.0168 | No |
| 3 | Sptbn1 | 3078 | 0.375 | 0.0418 | No |
| 4 | Bmpr1a | 3489 | 0.343 | 0.0687 | No |
| 5 | Ltbp2 | 5503 | 0.247 | 0.0256 | No |
| 6 | Smad7 | 6268 | 0.221 | 0.0247 | No |
| 7 | Cdk9 | 7055 | 0.197 | 0.0201 | No |
| 8 | Tjp1 | 8695 | 0.139 | -0.0224 | No |
| 9 | Ski | 8772 | 0.137 | -0.0085 | No |
| 10 | Ncor2 | 8850 | 0.134 | 0.0050 | No |
| 11 | Skil | 9295 | 0.121 | 0.0035 | No |
| 12 | Eng | 9470 | 0.115 | 0.0112 | No |
| 13 | Junb | 10570 | 0.086 | -0.0183 | No |
| 14 | Furin | 11015 | 0.075 | -0.0254 | No |
| 15 | Ctnnb1 | 11019 | 0.074 | -0.0164 | No |
| 16 | Rab31 | 11644 | 0.057 | -0.0321 | No |
| 17 | Ppm1a | 11885 | 0.051 | -0.0346 | No |
| 18 | Ifngr2 | 13173 | 0.019 | -0.0791 | No |
| 19 | Hdac1 | 13227 | 0.017 | -0.0789 | No |
| 20 | Bmp2 | 13435 | 0.013 | -0.0848 | No |
| 21 | Ube2d3 | 13755 | 0.008 | -0.0954 | No |
| 22 | Cdkn1c | 13864 | 0.005 | -0.0987 | No |
| 23 | Map3k7 | 14942 | -0.003 | -0.1374 | No |
| 24 | Slc20a1 | 15653 | -0.018 | -0.1610 | No |
| 25 | Smurf2 | 16158 | -0.031 | -0.1755 | No |
| 26 | Rhoa | 16235 | -0.033 | -0.1742 | No |
| 27 | Serpine1 | 16543 | -0.041 | -0.1804 | No |
| 28 | Apc | 17183 | -0.057 | -0.1966 | No |
| 29 | Xiap | 17377 | -0.063 | -0.1960 | No |
| 30 | Fnta | 18149 | -0.081 | -0.2141 | Yes |
| 31 | Tgfb1 | 18170 | -0.082 | -0.2049 | Yes |
| 32 | Wwtr1 | 18277 | -0.084 | -0.1986 | Yes |
| 33 | Tgfbr1 | 18683 | -0.095 | -0.2018 | Yes |
| 34 | Smurf1 | 18701 | -0.095 | -0.1908 | Yes |
| 35 | Tgif1 | 19001 | -0.103 | -0.1891 | Yes |
| 36 | Id2 | 19373 | -0.114 | -0.1887 | Yes |
| 37 | Id3 | 20117 | -0.136 | -0.1991 | Yes |
| 38 | Cdh1 | 20321 | -0.143 | -0.1891 | Yes |
| 39 | Smad3 | 20697 | -0.154 | -0.1839 | Yes |
| 40 | Trim33 | 20873 | -0.159 | -0.1709 | Yes |
| 41 | Arid4b | 20876 | -0.159 | -0.1516 | Yes |
| 42 | Ppp1ca | 21558 | -0.184 | -0.1540 | Yes |
| 43 | Smad1 | 21696 | -0.189 | -0.1360 | Yes |
| 44 | Acvr1 | 21935 | -0.198 | -0.1205 | Yes |
| 45 | Hipk2 | 23341 | -0.245 | -0.1417 | Yes |
| 46 | Bcar3 | 23531 | -0.254 | -0.1176 | Yes |
| 47 | Pmepa1 | 23808 | -0.261 | -0.0960 | Yes |
| 48 | Thbs1 | 24506 | -0.296 | -0.0853 | Yes |
| 49 | Klf10 | 24999 | -0.319 | -0.0644 | Yes |
| 50 | Bmpr2 | 25174 | -0.331 | -0.0304 | Yes |
| 51 | Smad6 | 26424 | -0.431 | -0.0233 | Yes |
| 52 | Ppp1r15a | 27135 | -0.543 | 0.0170 | Yes |

