DatasetMEP.MEP.ery_Pheno.cls
#Group3_versus_Group4.MEP.ery_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)-0.22396024
Normalized Enrichment Score (NES)-0.7506834
Nominal p-value0.72121215
FDR q-value0.94505525
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TGF_BETA_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Id117860.470-0.0077No
2Fkbp1a25100.4170.0168No
3Sptbn130780.3750.0418No
4Bmpr1a34890.3430.0687No
5Ltbp255030.2470.0256No
6Smad762680.2210.0247No
7Cdk970550.1970.0201No
8Tjp186950.139-0.0224No
9Ski87720.137-0.0085No
10Ncor288500.1340.0050No
11Skil92950.1210.0035No
12Eng94700.1150.0112No
13Junb105700.086-0.0183No
14Furin110150.075-0.0254No
15Ctnnb1110190.074-0.0164No
16Rab31116440.057-0.0321No
17Ppm1a118850.051-0.0346No
18Ifngr2131730.019-0.0791No
19Hdac1132270.017-0.0789No
20Bmp2134350.013-0.0848No
21Ube2d3137550.008-0.0954No
22Cdkn1c138640.005-0.0987No
23Map3k714942-0.003-0.1374No
24Slc20a115653-0.018-0.1610No
25Smurf216158-0.031-0.1755No
26Rhoa16235-0.033-0.1742No
27Serpine116543-0.041-0.1804No
28Apc17183-0.057-0.1966No
29Xiap17377-0.063-0.1960No
30Fnta18149-0.081-0.2141Yes
31Tgfb118170-0.082-0.2049Yes
32Wwtr118277-0.084-0.1986Yes
33Tgfbr118683-0.095-0.2018Yes
34Smurf118701-0.095-0.1908Yes
35Tgif119001-0.103-0.1891Yes
36Id219373-0.114-0.1887Yes
37Id320117-0.136-0.1991Yes
38Cdh120321-0.143-0.1891Yes
39Smad320697-0.154-0.1839Yes
40Trim3320873-0.159-0.1709Yes
41Arid4b20876-0.159-0.1516Yes
42Ppp1ca21558-0.184-0.1540Yes
43Smad121696-0.189-0.1360Yes
44Acvr121935-0.198-0.1205Yes
45Hipk223341-0.245-0.1417Yes
46Bcar323531-0.254-0.1176Yes
47Pmepa123808-0.261-0.0960Yes
48Thbs124506-0.296-0.0853Yes
49Klf1024999-0.319-0.0644Yes
50Bmpr225174-0.331-0.0304Yes
51Smad626424-0.431-0.0233Yes
52Ppp1r15a27135-0.5430.0170Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TGF_BETA_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TGF_BETA_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TGF_BETA_SIGNALING