DatasetMEP.MEP.ery_Pheno.cls
#Group3_versus_Group4.MEP.ery_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)0.28156304
Normalized Enrichment Score (NES)0.97900045
Nominal p-value0.4967742
FDR q-value0.9456702
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Mgst13680.7350.0825Yes
2Gpx33850.7260.1767Yes
3Mpo11640.5390.2188Yes
4Cdkn2d14200.5040.2753Yes
5Nqo126960.4030.2816Yes
6Gsr57350.2360.2022No
7Pfkp66340.2140.1975No
8Cat66540.2130.2246No
9Txnrd180070.1630.1968No
10Prdx494030.1170.1614No
11Hmox295210.1130.1719No
12Prnp95360.1130.1861No
13Srxn1100020.0990.1822No
14Junb105700.0860.1728No
15G6pdx109030.0770.1708No
16Ptpa113360.0660.1638No
17Gclm114210.0640.1691No
18Prdx1118780.0510.1592No
19Mbp119700.0490.1623No
20Ipcef1122000.0430.1596No
21Scaf4125410.0340.1516No
22Oxsr1129400.0240.1403No
23Lsp1130790.0210.1380No
24Sbno2131200.0200.1391No
25Ndufs2133000.0160.1347No
26Ercc2135740.0120.1263No
27Atox114934-0.0030.0774No
28Abcc115430-0.0130.0611No
29Txnrd215645-0.0180.0557No
30Egln216247-0.0330.0382No
31Glrx16546-0.0410.0327No
32Hhex17154-0.0570.0181No
33Msra17195-0.0580.0242No
34Ftl117688-0.0690.0153No
35Gclc18321-0.0850.0034No
36Selenos19285-0.111-0.0170No
37Sod219332-0.113-0.0040No
38Prdx219595-0.1200.0022No
39Prdx620088-0.1350.0020No
40Gpx421072-0.166-0.0120No
41Sod121255-0.1720.0039No
42Stk2521518-0.1820.0181No
43Txn121630-0.1860.0384No
44Fes21924-0.1980.0536No
45Pdlim123187-0.2390.0390No
46Ndufa624403-0.2910.0328No
47Lamtor524516-0.2960.0674No
48Glrx225340-0.3410.0821No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY