DatasetMEP.MEP.ery_Pheno.cls
#Group3_versus_Group4.MEP.ery_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_MYOGENESIS
Enrichment Score (ES)0.2914589
Normalized Enrichment Score (NES)1.2229674
Nominal p-value0.10288066
FDR q-value1.0
FWER p-Value0.95
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_MYOGENESIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Igf1621.0680.0254Yes
2Igfbp73190.7560.0356Yes
3Fdps3650.7370.0530Yes
4Gpx33850.7260.0710Yes
5Mras6100.6490.0796Yes
6Casq29740.5740.0812Yes
7Pcx10930.5540.0912Yes
8Tead412180.5300.1004Yes
9Tnnt313760.5100.1079Yes
10Notch116430.4810.1106Yes
11Tnni116780.4770.1217Yes
12Cnn318100.4680.1290Yes
13Col15a118620.4630.1391Yes
14Myom119490.4520.1477Yes
15Pgam219570.4500.1590Yes
16Ncam120500.4380.1670Yes
17Lama220970.4340.1765Yes
18Syngr222380.4270.1825Yes
19Col1a122870.4240.1917Yes
20Mb23970.4200.1986Yes
21Apod26770.4050.1988Yes
22Nqo126960.4030.2086Yes
23Tpm228190.3920.2143Yes
24Efs28630.3870.2227Yes
25Eno329750.3840.2286Yes
26Sparc30800.3740.2345Yes
27Kcnh132210.3630.2387Yes
28Cacna1h32300.3620.2478Yes
29Cdh1332910.3570.2549Yes
30Cfd37760.3260.2456Yes
31Acta137840.3260.2538Yes
32Gaa40350.3080.2527Yes
33Rit141040.3020.2580Yes
34Des41340.3000.2647Yes
35Ckm41350.3000.2724Yes
36Fxyd141390.3000.2801Yes
37Myom242410.3000.2841Yes
38Myh442540.3000.2915Yes
39Ak147330.2800.2813No
40Actn248900.2740.2826No
41Cacng155190.2460.2661No
42Sphk156390.2410.2680No
43Myh958470.2330.2665No
44Ptp4a358480.2320.2725No
45Col6a259520.2270.2746No
46Crat61430.2270.2735No
47Tcap62020.2240.2772No
48Ablim162970.2190.2794No
49Col3a163860.2160.2818No
50Reep166890.2120.2763No
51Klf567570.2090.2792No
52Itgb469660.2000.2768No
53Mybpc371960.1920.2734No
54Myh373130.1870.2740No
55Kcnh276000.1770.2682No
56Nos180920.1600.2544No
57Tsc282290.1540.2534No
58Tpm382640.1520.2561No
59Fabp383850.1490.2556No
60Pick185160.1450.2546No
61Tnnc285450.1440.2573No
62Tagln85710.1440.2601No
63Gja587850.1360.2559No
64Psen290540.1280.2494No
65Cdkn1a91460.1250.2493No
66Dapk293880.1170.2435No
67Prnp95360.1130.2411No
68Clu96880.1080.2384No
69Bag1100880.0970.2263No
70Acsl1101590.0950.2263No
71Schip1101710.0950.2283No
72Atp6ap1104530.0890.2204No
73Bin1107650.0810.2111No
74Ache110760.0730.2017No
75Akt2110860.0730.2032No
76Agl111460.0710.2029No
77Gsn111720.0700.2038No
78Smtn112410.0690.2031No
79Mylk112660.0680.2040No
80Gnao1113180.0670.2039No
81Ephb3113370.0660.2049No
82Dmd117980.0530.1895No
83Myoz1118980.0510.1872No
84Sorbs1119980.0480.1849No
85Foxo4121040.0450.1822No
86Sgcg123340.0390.1749No
87Sgcd124960.0350.1699No
88Ryr1126370.0320.1656No
89Gadd45b126650.0310.1654No
90Tnnc1126910.0300.1653No
91Ifrd1128550.0260.1600No
92Myo1c128660.0260.1603No
93Pygm129800.0230.1568No
94Plxnb2130000.0230.1567No
95Lsp1130790.0210.1544No
96Tnnt1131050.0200.1540No
97Sirt2132840.0160.1479No
98Cox6a2135350.0120.1391No
99Eif4a2136880.0090.1338No
100App137990.0070.1300No
101Lpin1138300.0060.1291No
102Ptgis141360.0000.1179No
103Tnnt2141680.0000.1168No
104Vipr1142040.0000.1155No
105Myh2142060.0000.1155No
106Myl3142960.0000.1123No
107Spdef14847-0.0010.0922No
108Svil15387-0.0120.0729No
109Mef2a15408-0.0130.0725No
110Erbb315725-0.0200.0615No
111Agrn15751-0.0210.0611No
112Itgb115757-0.0210.0614No
113Itgb515867-0.0240.0581No
114Nav216355-0.0370.0413No
115Mef2c16450-0.0390.0388No
116Bdkrb216840-0.0490.0259No
117Speg16855-0.0490.0267No
118Sh2b116989-0.0520.0232No
119Sptan117126-0.0560.0196No
120Rb117269-0.0600.0160No
121Gabarapl217419-0.0640.0122No
122Myl417423-0.0640.0138No
123Col6a317550-0.0670.0109No
124Sh3bgr17818-0.0720.0030No
125Bhlhe4017930-0.0750.0009No
126Dmpk17940-0.0750.0025No
127Tgfb118170-0.082-0.0037No
128Wwtr118277-0.084-0.0054No
129Stc218352-0.086-0.0059No
130Myl218378-0.086-0.0046No
131Mapre318622-0.093-0.0110No
132Myl6b19071-0.105-0.0246No
133Myl119325-0.113-0.0310No
134Hbegf19399-0.115-0.0306No
135Pkia19450-0.116-0.0295No
136Mef2d19499-0.117-0.0282No
137Cox7a120046-0.134-0.0447No
138Adcy920434-0.146-0.0550No
139Pfkm20725-0.155-0.0616No
140Fgf220922-0.161-0.0645No
141Mylpf21007-0.164-0.0634No
142Sspn21119-0.168-0.0631No
143Flii21153-0.169-0.0599No
144Col4a221167-0.170-0.0560No
145Actn321183-0.170-0.0521No
146Ocel121366-0.177-0.0542No
147Camk2b21665-0.188-0.0602No
148Ppfia422089-0.203-0.0704No
149Fhl122094-0.204-0.0653No
150Myh822469-0.217-0.0733No
151Aebp122474-0.217-0.0678No
152Pde4dip22572-0.221-0.0657No
153Hspb822613-0.221-0.0614No
154Mapk1222803-0.222-0.0626No
155Hdac523194-0.239-0.0706No
156Ctf123439-0.249-0.0731No
157Ankrd223567-0.256-0.0711No
158Sorbs324084-0.274-0.0828No
159Slc6a824123-0.277-0.0770No
160Dtna24191-0.280-0.0722No
161Tpd52l124216-0.282-0.0658No
162Kifc324239-0.283-0.0593No
163Cryab24311-0.287-0.0545No
164Cd3624481-0.294-0.0530No
165Ldb324539-0.298-0.0474No
166Large124936-0.316-0.0537No
167Pdlim725490-0.354-0.0647No
168Casq125725-0.369-0.0637No
169Csrp325838-0.378-0.0580No
170Atp2a126332-0.424-0.0650No
171Ckb26358-0.428-0.0549No
172Chrnb126407-0.430-0.0455No
173Itga726495-0.441-0.0373No
174Sgca26596-0.450-0.0293No
175Ckmt226739-0.467-0.0224No
176Myh1127078-0.530-0.0210No
177Fkbp1b27450-0.693-0.0167No
178Adam1227559-0.8580.0016No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_MYOGENESIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_MYOGENESIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_MYOGENESIS