DatasetMEP.MEP.ery_Pheno.cls
#Group3_versus_Group4.MEP.ery_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)-0.22962025
Normalized Enrichment Score (NES)-0.92056096
Nominal p-value0.56363636
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ldlr591.0760.0211No
2Best1631.0680.0440No
3Tacr1890.9640.0640No
4Nod23520.7390.0704No
5Inhba5580.6640.0772No
6Adora2b8560.6000.0794No
7Ccr710490.5640.0845No
8Ros110810.5550.0954No
9Il18rap11320.5460.1054No
10Icosl12770.5200.1113No
11Ccl515150.4960.1134No
12Tlr116330.4830.1196No
13Icam417060.4730.1271No
14Has218530.4630.1318No
15Mefv18920.4590.1404No
16Il7r19130.4570.1495No
17Il1b19650.4490.1573No
18Itgb823270.4210.1533No
19Lpar124950.4180.1562No
20Tacr325080.4170.1648No
21Il1826940.4030.1667No
22Sell27620.3960.1728No
23Il1r130270.3790.1714No
24Nmur132670.3590.1704No
25Cd1436070.3360.1653No
26Cmklr136440.3350.1713No
27Slc31a136510.3350.1783No
28Slc7a239140.3170.1756No
29Cybb40820.3050.1761No
30Cd8241060.3020.1818No
31Atp2a243620.2980.1789No
32Kcnj246490.2840.1746No
33Mmp1447200.2810.1781No
34P2ry249350.2710.1762No
35Cd4853120.2580.1680No
36Sema4d54430.2500.1687No
37Sgms256100.2430.1679No
38Sphk156390.2410.1721No
39Met56520.2410.1768No
40Aqp956690.2400.1814No
41Timp156730.2400.1865No
42Fpr159810.2270.1802No
43Il1a61630.2260.1785No
44Adgre162200.2230.1813No
45Ereg63950.2160.1796No
46Prok264000.2160.1841No
47Gpc366150.2150.1809No
48Pde4b66970.2110.1825No
49Ptgir67030.2110.1869No
50Gp1ba67710.2080.1890No
51Adrm168300.2050.1913No
52P2rx768570.2050.1948No
53Itgb368610.2040.1991No
54Cxcr669480.2010.2003No
55Slc28a275370.1800.1827No
56Osm81460.1570.1639No
57Slc11a282340.1540.1641No
58Il4ra82800.1520.1657No
59Slc7a182920.1510.1686No
60Icam183600.1490.1694No
61Itga584870.1460.1679No
62Cdkn1a91460.1250.1467No
63Rasgrp194350.1160.1387No
64Cd6995790.1110.1358No
65Acvr1b100660.0980.1202No
66Csf3r101090.0960.1208No
67Rhog105790.0850.1055No
68Emp3106240.0840.1057No
69Irak2106510.0840.1066No
70Clec5a108380.0790.1015No
71Ccl17108920.0780.1013No
72Calcrl111690.0700.0927No
73Hrh1112550.0690.0911No
74Il10113060.0670.0907No
75Tapbp114140.0640.0882No
76Atp2b1114800.0620.0872No
77Axl115800.0590.0849No
78Hif1a118090.0530.0777No
79Osmr126070.0320.0493No
80Pcdh7129070.0250.0390No
81Ifngr2131730.0190.0297No
82Hpn133880.0130.0222No
83Cd70134310.0130.0209No
84Abi1139900.0020.0007No
85C3ar1142300.000-0.0081No
86Irf114879-0.001-0.0317No
87Ripk215066-0.006-0.0383No
88Gnai315138-0.008-0.0407No
89Lif15156-0.008-0.0412No
90Mxd115810-0.022-0.0645No
91Slamf115834-0.023-0.0648No
92Kif1b15960-0.026-0.0688No
93Stab116048-0.028-0.0714No
94Nlrp316073-0.029-0.0716No
95Lamp316350-0.036-0.0809No
96Olr116389-0.037-0.0815No
97Nampt16524-0.040-0.0855No
98Serpine116543-0.041-0.0853No
99Klf616653-0.044-0.0883No
100Atp2c117030-0.053-0.1009No
101Gna1517130-0.056-0.1033No
102Tnfsf1517166-0.057-0.1033No
103Ffar217185-0.057-0.1027No
104Scn1b17233-0.059-0.1032No
105Lyn17244-0.059-0.1023No
106Il1517404-0.064-0.1067No
107Kcnmb217761-0.071-0.1181No
108Il617789-0.072-0.1176No
109Raf118020-0.078-0.1243No
110Sri18021-0.078-0.1226No
111Gpr13218755-0.097-0.1472No
112Psen118929-0.101-0.1514No
113Ptafr18959-0.102-0.1502No
114Tnfrsf1b19083-0.105-0.1524No
115Selenos19285-0.111-0.1574No
116Hbegf19399-0.115-0.1590No
117Pdpn19443-0.116-0.1581No
118Ccrl219557-0.118-0.1596No
119Rgs1619827-0.126-0.1667No
120Msr119964-0.131-0.1688No
121Bst220006-0.132-0.1675No
122Rela20503-0.148-0.1824No
123Myc20568-0.150-0.1815No
124Cx3cl121412-0.178-0.2084No
125Ebi321501-0.181-0.2076No
126P2rx421609-0.185-0.2076No
127Acvr2a21742-0.191-0.2082No
128Il15ra21842-0.195-0.2076No
129Dcbld221865-0.196-0.2042No
130Ptger221947-0.199-0.2029No
131Cxcl1022109-0.204-0.2043No
132Ly6e22177-0.207-0.2023No
133Tlr322285-0.210-0.2017No
134Btg222860-0.224-0.2178No
135Nmi22966-0.229-0.2166No
136Ptpre23007-0.231-0.2131No
137F323137-0.237-0.2127No
138Gch123228-0.241-0.2108No
139Il18r123368-0.246-0.2105No
140Tnfaip623822-0.261-0.2214No
141Tnfrsf923926-0.266-0.2194No
142Cd4024114-0.276-0.2202No
143Eif2ak224372-0.289-0.2234Yes
144Lcp224389-0.290-0.2177Yes
145Pik3r524419-0.291-0.2125Yes
146Pvr24442-0.292-0.2069Yes
147Cxcl524459-0.293-0.2012Yes
148Ifnar124466-0.293-0.1951Yes
149Tlr224525-0.297-0.1908Yes
150Slc31a224536-0.298-0.1847Yes
151Slc1a224587-0.300-0.1800Yes
152Ptger424689-0.307-0.1771Yes
153Mep1a24835-0.314-0.1756Yes
154Kcna325302-0.338-0.1853Yes
155Tnfsf1025436-0.350-0.1826Yes
156Ahr25524-0.357-0.1781Yes
157Rnf144b25530-0.357-0.1705Yes
158Plaur25535-0.358-0.1630Yes
159Gabbr125840-0.378-0.1659Yes
160Il2rb26024-0.397-0.1640Yes
161Nfkb126029-0.398-0.1555Yes
162Slc4a426129-0.410-0.1503Yes
163Npffr226354-0.427-0.1492Yes
164Nfkbia26400-0.429-0.1416Yes
165Lck26580-0.449-0.1384Yes
166Tnfsf926691-0.462-0.1325Yes
167Irf726817-0.483-0.1266Yes
168Fzd526896-0.494-0.1188Yes
169Gpr18326994-0.514-0.1112Yes
170Rtp427146-0.548-0.1049Yes
171Ifitm127162-0.553-0.0935Yes
172Sele27307-0.599-0.0858Yes
173Scarf127509-0.763-0.0766Yes
174Csf127536-0.805-0.0602Yes
175Rgs127543-0.816-0.0428Yes
176Il10ra27549-0.835-0.0249Yes
177Abca127600-1.2410.0001Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE