DatasetMEP.MEP.ery_Pheno.cls
#Group3_versus_Group4.MEP.ery_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_DNA_REPAIR
Enrichment Score (ES)-0.14047833
Normalized Enrichment Score (NES)-0.6139979
Nominal p-value0.832
FDR q-value0.9756639
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_DNA_REPAIR   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Pde6g7780.6120.0029No
2Sac3d127430.398-0.0483No
3Cda30640.376-0.0408No
4Dguok35310.338-0.0405No
5Ada36640.334-0.0282No
6Tk237660.327-0.0152No
7Taf1340490.307-0.0098No
8Ccno42440.300-0.0016No
9Ak147330.280-0.0050No
10Nme349090.2720.0025No
11Poll52380.2630.0039No
12Srsf653260.2570.0139No
13Nme453890.2530.0245No
14Pde4b66970.211-0.0123No
15Pold167350.210-0.0029No
16Adrm168300.2050.0041No
17Gtf3c570720.1960.0054No
18Bcap3173050.1870.0065No
19Cant173630.1850.0139No
20Gtf2h175140.1810.0176No
21Taf1c78620.1670.0135No
22Polr2a80780.1600.0138No
23Ncbp285770.1430.0030No
24Zwint87860.1360.0024No
25Aprt91400.125-0.0041No
26Polr1d93640.118-0.0061No
27Itpa94580.115-0.0037No
28Dgcr896010.111-0.0032No
29Ercc896400.1090.0010No
30Polr2c96780.1090.0052No
31Arl6ip198110.1050.0058No
32Xpc99660.1010.0053No
33Taf12101350.0960.0041No
34Gtf2a2102320.0930.0053No
35Ssrp1102800.0920.0083No
36Snapc4104110.0900.0082No
37Ago4104950.0880.0097No
38Ddb2106820.0830.0071No
39Rfc2108980.0780.0033No
40Rad51110180.0740.0027No
41Ercc5111900.0700.0001No
42Rfc5112100.0700.0029No
43Sf3a3112150.0700.0063No
44Pom121112400.0690.0090No
45Umps113560.0660.0081No
46Rrm2b113850.0650.0104No
47Rfc4116770.0570.0027No
48Fen1116820.0570.0055No
49Lig1118690.0520.0013No
50Rev3l119800.049-0.0002No
51Polr2h120040.0480.0014No
52Tyms120370.0470.0026No
53Vps37b121450.0440.0010No
54Polr1c122500.042-0.0007No
55Gtf2b124910.035-0.0076No
56Mpg124980.035-0.0060No
57Nelfb126860.030-0.0113No
58Hcls1126980.030-0.0102No
59Gmpr2127160.030-0.0093No
60Rnmt127280.029-0.0082No
61Pola1127440.029-0.0073No
62Gtf2h3128110.027-0.0083No
63Aaas128230.027-0.0073No
64Adcy6131090.020-0.0167No
65Gtf2f1131320.019-0.0165No
66Polr2g131880.018-0.0175No
67Ak3133490.015-0.0226No
68Snapc5134180.013-0.0244No
69Ercc2135740.012-0.0295No
70Taf9139490.004-0.0429No
71Ercc3141040.000-0.0485No
72Nudt915104-0.007-0.0845No
73Alyref15246-0.010-0.0892No
74Polr3c15380-0.012-0.0934No
75Supt4a15714-0.019-0.1045No
76Smad515922-0.025-0.1108No
77Cstf315949-0.026-0.1104No
78Polr2f16093-0.029-0.1141No
79Polr2d16212-0.033-0.1167No
80Eif1b16539-0.041-0.1265No
81Cetn216568-0.041-0.1254No
82Dut16576-0.042-0.1235No
83Nfx116623-0.043-0.1230No
84Nelfcd16690-0.045-0.1231No
85Brf216696-0.045-0.1210No
86Pcna16700-0.045-0.1188No
87Tsg10116920-0.050-0.1242No
88Pold417103-0.055-0.1280No
89Polr2e17338-0.062-0.1334No
90Supt517411-0.064-0.1328No
91Rad5217545-0.067-0.1342No
92Nt5c317604-0.067-0.1329No
93Dctn417704-0.069-0.1330No
94Polb17733-0.070-0.1304No
95Ell17780-0.071-0.1285No
96Rfc317854-0.073-0.1274No
97Impdh218214-0.082-0.1363Yes
98Sec61a118257-0.083-0.1335Yes
99Surf118342-0.086-0.1322Yes
100Pold318383-0.087-0.1293Yes
101Ercc418436-0.088-0.1267Yes
102Taf1018438-0.089-0.1222Yes
103Cox1718603-0.092-0.1235Yes
104Rala18618-0.093-0.1192Yes
105Dad118751-0.096-0.1191Yes
106Pola218809-0.098-0.1162Yes
107Prim118969-0.102-0.1168Yes
108Rae119026-0.104-0.1135Yes
109Sdcbp19185-0.108-0.1138Yes
110Gtf2h519401-0.115-0.1157Yes
111Nme119513-0.117-0.1138Yes
112Tarbp219516-0.117-0.1078Yes
113Rpa219801-0.125-0.1118Yes
114Guk120064-0.134-0.1145Yes
115Nt5c20109-0.136-0.1091Yes
116Polh20243-0.140-0.1068Yes
117Gsdme20275-0.141-0.1008Yes
118Edf120544-0.149-0.1029Yes
119Pole420562-0.150-0.0959Yes
120Polr3gl20723-0.155-0.0938Yes
121Pnp20731-0.156-0.0861Yes
122Trp5320985-0.163-0.0870Yes
123Gpx421072-0.166-0.0816Yes
124Rbx121134-0.169-0.0752Yes
125Stx321250-0.172-0.0706Yes
126Mrpl4021288-0.174-0.0631Yes
127Ddb121478-0.181-0.0608Yes
128Clp121531-0.182-0.0533Yes
129Polr2j21720-0.190-0.0505Yes
130Nelfe21857-0.195-0.0455Yes
131Eloa22354-0.213-0.0526Yes
132Usp1122569-0.221-0.0492Yes
133Mpc222925-0.227-0.0505Yes
134Upf3b22961-0.229-0.0401Yes
135Vps2823038-0.233-0.0310Yes
136Cmpk223070-0.234-0.0202Yes
137Bcam23800-0.260-0.0335Yes
138Taf624004-0.270-0.0271Yes
139Zfp70724709-0.308-0.0370Yes
140Polr2k24783-0.311-0.0238Yes
141Nudt2125145-0.328-0.0202Yes
142Polr2i25319-0.339-0.0091Yes
143Ercc125946-0.389-0.0121Yes
144Rpa325971-0.3910.0070Yes
145Polr1h26212-0.4130.0194Yes
146Npr227325-0.6110.0101Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_DNA_REPAIR   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_DNA_REPAIR: Random ES distribution   
Gene set null distribution of ES for HALLMARK_DNA_REPAIR