Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group2_versus_Group4.MEP.ery_Pheno.cls #Group2_versus_Group4_repos
Phenotype	MEP.ery_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	-0.35388735
Normalized Enrichment Score (NES)	-1.2466407
Nominal p-value	0.24080883
FDR q-value	1.0
FWER p-Value	0.868

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Cebpd	260	0.852	0.0078	No
2	Ccnd1	1054	0.616	-0.0086	No
3	Birc2	1234	0.587	-0.0032	No
4	Il1a	1854	0.513	-0.0154	No
5	Fosb	2445	0.463	-0.0275	No
6	Mcl1	2696	0.445	-0.0276	No
7	Serpinb2	2864	0.437	-0.0248	No
8	Klf4	4061	0.369	-0.0610	No
9	Irs2	4082	0.367	-0.0542	No
10	Il1b	4091	0.367	-0.0471	No
11	Btg3	4144	0.364	-0.0416	No
12	Rnf19b	4429	0.348	-0.0449	No
13	Il23a	4700	0.338	-0.0478	No
14	Plk2	4795	0.333	-0.0445	No
15	Fos	4817	0.332	-0.0385	No
16	Ccl5	5160	0.321	-0.0445	No
17	Cebpb	5328	0.317	-0.0441	No
18	Zfp36	5409	0.312	-0.0407	No
19	Sphk1	5411	0.312	-0.0345	No
20	Jun	5456	0.308	-0.0298	No
21	Klf2	5471	0.308	-0.0241	No
22	Phlda2	5508	0.306	-0.0192	No
23	Plau	5568	0.302	-0.0152	No
24	Hbegf	5601	0.300	-0.0103	No
25	Atp2b1	6253	0.274	-0.0284	No
26	Ehd1	6419	0.267	-0.0290	No
27	Socs3	6695	0.253	-0.0339	No
28	Nampt	6890	0.244	-0.0360	No
29	Mxd1	6954	0.241	-0.0335	No
30	Rcan1	7321	0.230	-0.0421	No
31	Slc16a6	7448	0.224	-0.0422	No
32	Icosl	7714	0.218	-0.0474	No
33	Tsc22d1	8223	0.200	-0.0619	No
34	Dusp1	8506	0.189	-0.0684	No
35	Kynu	8548	0.187	-0.0661	No
36	Vegfa	8678	0.182	-0.0671	No
37	Sgk1	8703	0.180	-0.0643	No
38	Cd44	9068	0.166	-0.0742	No
39	Inhba	9101	0.165	-0.0720	No
40	Cd80	9317	0.162	-0.0766	No
41	Ifit2	9779	0.144	-0.0904	No
42	F2rl1	10331	0.131	-0.1079	No
43	Tnip2	10474	0.125	-0.1105	No
44	Cd69	10540	0.123	-0.1104	No
45	Ldlr	10740	0.116	-0.1153	No
46	Tnip1	10762	0.115	-0.1137	No
47	Gadd45a	10847	0.112	-0.1145	No
48	Map2k3	11029	0.105	-0.1190	No
49	B4galt1	11354	0.093	-0.1289	No
50	Dnajb4	11463	0.090	-0.1310	No
51	Ccnl1	11716	0.081	-0.1386	No
52	Map3k8	11970	0.071	-0.1464	No
53	Id2	12006	0.070	-0.1462	No
54	Ptger4	12304	0.057	-0.1559	No
55	Nr4a1	12314	0.057	-0.1551	No
56	Ifih1	12483	0.051	-0.1602	No
57	Il18	12679	0.044	-0.1664	No
58	Dennd5a	12725	0.042	-0.1672	No
59	Nfil3	12866	0.037	-0.1715	No
60	Fjx1	13003	0.032	-0.1759	No
61	Rhob	13022	0.031	-0.1759	No
62	Il7r	13040	0.031	-0.1759	No
63	Fosl1	13044	0.031	-0.1754	No
64	Tank	13281	0.023	-0.1835	No
65	Egr3	14099	0.000	-0.2133	No
66	Tnfaip3	14735	-0.013	-0.2362	No
67	Yrdc	14741	-0.013	-0.2361	No
68	Slc2a6	14781	-0.014	-0.2373	No
69	Tiparp	14927	-0.019	-0.2421	No
70	Slc2a3	15050	-0.024	-0.2461	No
71	Pdlim5	15133	-0.026	-0.2486	No
72	Il6st	15266	-0.031	-0.2527	No
73	Tnfaip2	15322	-0.033	-0.2541	No
74	Olr1	15575	-0.043	-0.2624	No
75	Nfe2l2	16094	-0.061	-0.2800	No
76	Ccrl2	16273	-0.067	-0.2852	No
77	Sqstm1	16280	-0.067	-0.2840	No
78	Cdkn1a	16430	-0.073	-0.2880	No
79	Ier2	16457	-0.074	-0.2874	No
80	Tubb2a	16661	-0.081	-0.2932	No
81	Junb	16737	-0.083	-0.2943	No
82	Bhlhe40	16805	-0.086	-0.2950	No
83	Sat1	17113	-0.097	-0.3042	No
84	Smad3	17180	-0.099	-0.3046	No
85	Hes1	17335	-0.105	-0.3081	No
86	Tnfrsf9	17360	-0.106	-0.3068	No
87	Lif	17411	-0.108	-0.3064	No
88	Lamb3	17432	-0.109	-0.3050	No
89	Dusp4	17444	-0.109	-0.3032	No
90	Ppp1r15a	17705	-0.117	-0.3103	No
91	Egr2	17729	-0.118	-0.3087	No
92	Stat5a	17805	-0.121	-0.3090	No
93	Irf1	17838	-0.122	-0.3077	No
94	Ier5	17848	-0.122	-0.3055	No
95	Snn	17850	-0.123	-0.3031	No
96	Trib1	17854	-0.123	-0.3007	No
97	Klf6	17868	-0.123	-0.2987	No
98	Clcf1	17909	-0.125	-0.2976	No
99	Per1	18129	-0.133	-0.3029	No
100	Traf1	18250	-0.138	-0.3045	No
101	Dram1	18339	-0.141	-0.3048	No
102	Gadd45b	18345	-0.141	-0.3021	No
103	Icam1	18701	-0.154	-0.3120	No
104	Ripk2	18916	-0.161	-0.3165	No
105	Bcl6	19132	-0.168	-0.3209	No
106	Dusp5	19142	-0.169	-0.3178	No
107	Serpine1	19179	-0.170	-0.3157	No
108	Bcl3	19273	-0.174	-0.3156	No
109	Klf9	19353	-0.177	-0.3148	No
110	Nfkb2	19409	-0.179	-0.3132	No
111	Phlda1	19575	-0.184	-0.3155	No
112	Tnf	19855	-0.194	-0.3217	No
113	Rela	19885	-0.195	-0.3188	No
114	Sod2	20419	-0.215	-0.3339	No
115	Nfat5	20504	-0.219	-0.3325	No
116	Bmp2	20622	-0.221	-0.3323	No
117	Areg	20624	-0.221	-0.3279	No
118	Il15ra	20839	-0.226	-0.3311	No
119	Plpp3	21151	-0.239	-0.3376	No
120	Ets2	21345	-0.248	-0.3396	No
121	Klf10	21610	-0.260	-0.3439	No
122	Pde4b	21804	-0.265	-0.3456	No
123	Eif1	21968	-0.272	-0.3460	No
124	Cxcl10	22185	-0.282	-0.3482	Yes
125	Tnfaip8	22252	-0.285	-0.3448	Yes
126	Serpinb8	22274	-0.286	-0.3398	Yes
127	B4galt5	22280	-0.286	-0.3341	Yes
128	Atf3	22336	-0.288	-0.3303	Yes
129	Nr4a2	22589	-0.298	-0.3334	Yes
130	Tnc	22617	-0.299	-0.3284	Yes
131	Cd83	22769	-0.307	-0.3276	Yes
132	F3	23010	-0.317	-0.3300	Yes
133	Trip10	23073	-0.320	-0.3257	Yes
134	Btg2	23080	-0.321	-0.3194	Yes
135	Sdc4	23122	-0.323	-0.3144	Yes
136	Nr4a3	23246	-0.328	-0.3122	Yes
137	Ifngr2	23280	-0.331	-0.3067	Yes
138	Myc	23468	-0.341	-0.3066	Yes
139	Tlr2	23476	-0.341	-0.2999	Yes
140	Plek	23870	-0.364	-0.3069	Yes
141	Cflar	24003	-0.372	-0.3042	Yes
142	Cxcl5	24065	-0.375	-0.2988	Yes
143	Ier3	24244	-0.386	-0.2974	Yes
144	Tap1	24249	-0.386	-0.2897	Yes
145	Rigi	24285	-0.388	-0.2831	Yes
146	Gch1	24311	-0.390	-0.2761	Yes
147	Marcks	24360	-0.393	-0.2699	Yes
148	Fosl2	24892	-0.426	-0.2806	Yes
149	Relb	24933	-0.428	-0.2734	Yes
150	Jag1	25034	-0.435	-0.2682	Yes
151	Plaur	25120	-0.442	-0.2624	Yes
152	Birc3	25255	-0.453	-0.2581	Yes
153	Litaf	25410	-0.467	-0.2542	Yes
154	Tnfsf9	25411	-0.467	-0.2447	Yes
155	Tnfaip6	25413	-0.467	-0.2353	Yes
156	Zbtb10	25421	-0.467	-0.2261	Yes
157	Spsb1	25525	-0.478	-0.2201	Yes
158	Maff	25623	-0.486	-0.2138	Yes
159	Abca1	25728	-0.497	-0.2075	Yes
160	Nfkbie	25817	-0.507	-0.2004	Yes
161	Nfkb1	25844	-0.509	-0.1910	Yes
162	Kdm6b	25916	-0.517	-0.1831	Yes
163	Pnrc1	26108	-0.537	-0.1792	Yes
164	Ninj1	26184	-0.545	-0.1709	Yes
165	Tgif1	26281	-0.558	-0.1630	Yes
166	Zc3h12a	26392	-0.576	-0.1554	Yes
167	Dusp2	26430	-0.582	-0.1449	Yes
168	Gpr183	26435	-0.583	-0.1332	Yes
169	Pmepa1	26459	-0.586	-0.1222	Yes
170	Il6	26567	-0.602	-0.1139	Yes
171	Fut4	26585	-0.603	-0.1022	Yes
172	Pfkfb3	26688	-0.620	-0.0934	Yes
173	Nfkbia	26726	-0.625	-0.0821	Yes
174	Btg1	26729	-0.625	-0.0694	Yes
175	Egr1	26761	-0.630	-0.0578	Yes
176	Gfpt2	26873	-0.653	-0.0486	Yes
177	Rel	26879	-0.655	-0.0355	Yes
178	Panx1	26940	-0.666	-0.0242	Yes
179	Ptpre	27220	-0.747	-0.0192	Yes
180	Csf1	27254	-0.759	-0.0050	Yes
181	Gem	27468	-0.869	0.0049	Yes