DatasetMEP.MEP.ery_Pheno.cls
#Group2_versus_Group4.MEP.ery_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.38665444
Normalized Enrichment Score (NES)-1.2496583
Nominal p-value0.25612053
FDR q-value1.0
FWER p-Value0.865
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Fcgr111430.599-0.0295No
2Myd8812900.579-0.0230No
3Irf819360.506-0.0363No
4Arid5b24030.468-0.0437No
5Znfx125420.454-0.0395No
6Cd8631250.419-0.0522No
7Lats233380.405-0.0517No
8Upp136300.388-0.0544No
9Rnf21338230.379-0.0537No
10Bank140110.371-0.0530No
11Trim2143570.352-0.0584No
12Parp1446640.340-0.0626No
13Nup9348970.329-0.0644No
14Pnpt151060.322-0.0655No
15Ccl551600.321-0.0609No
16Irf454640.308-0.0656No
17Il18bp59430.285-0.0773No
18Ciita59530.284-0.0718No
19St3gal560510.280-0.0697No
20Cfh61110.277-0.0662No
21Cmpk263540.270-0.0695No
22Isoc164320.267-0.0669No
23Cmtr166320.256-0.0689No
24Socs366950.253-0.0660No
25Slamf767280.251-0.0621No
26Oas368450.246-0.0613No
27Rsad268750.245-0.0574No
28Nampt68900.244-0.0529No
29Wars170040.239-0.0522No
30Adar73600.228-0.0605No
31Lap373810.227-0.0566No
32Samd9l78770.211-0.0703No
33Trim2579480.209-0.0687No
34Ube2l681200.204-0.0707No
35Sppl2a84270.191-0.0780No
36Jak284880.189-0.0763No
37Pml85190.188-0.0736No
38Stat187720.178-0.0792No
39Helz287740.178-0.0756No
40Pnp88080.176-0.0732No
41Eif2ak290750.165-0.0795No
42Trim2693520.161-0.0863No
43Oasl194780.156-0.0877No
44Mthfd296400.150-0.0906No
45Ifit297790.144-0.0926No
46Arl4a102430.134-0.1068No
47Cd69105400.123-0.1151No
48Serping1105450.123-0.1127No
49Sspn105960.120-0.1121No
50Rapgef6107270.116-0.1145No
51Rnf31107630.115-0.1134No
52Cfb111450.101-0.1253No
53Psmb2111560.100-0.1236No
54Tor1b114540.090-0.1326No
55Samhd1120610.067-0.1533No
56Ido1121770.063-0.1563No
57Ifih1124830.051-0.1663No
58Tapbp129880.032-0.1841No
59Ptpn6131540.027-0.1895No
60Il4ra131640.027-0.1893No
61Pfkp132910.022-0.1935No
62Casp3133850.020-0.1965No
63Irf9134790.017-0.1995No
64Stat2137590.008-0.2095No
65Fpr1141100.000-0.2223No
66Ifi3514442-0.003-0.2343No
67Rbck114728-0.012-0.2444No
68Tnfaip314735-0.013-0.2444No
69Ptpn114893-0.018-0.2497No
70Fgl215070-0.025-0.2557No
71Cd7415101-0.025-0.2562No
72Selp15233-0.030-0.2604No
73Ptpn215247-0.030-0.2603No
74Tnfaip215322-0.033-0.2623No
75Tdrd715505-0.041-0.2681No
76Ogfr15577-0.043-0.2698No
77Ifit315678-0.047-0.2725No
78Gbp315721-0.048-0.2730No
79Dhx5816232-0.065-0.2903No
80Isg1516241-0.066-0.2893No
81Herc616360-0.070-0.2921No
82Irf716405-0.072-0.2923No
83Cdkn1a16430-0.073-0.2917No
84Pla2g4a16454-0.073-0.2910No
85Ripk116565-0.077-0.2935No
86Vcam116655-0.080-0.2951No
87Hif1a16660-0.081-0.2936No
88Bst216960-0.091-0.3026No
89Psma216981-0.091-0.3015No
90Psma317056-0.094-0.3023No
91Irf217069-0.095-0.3008No
92Mvp17520-0.110-0.3150No
93Bpgm17612-0.114-0.3160No
94Ifi3017666-0.116-0.3155No
95Parp1217710-0.118-0.3147No
96Irf117838-0.122-0.3169No
97Casp817859-0.123-0.3151No
98Psme218128-0.132-0.3222No
99Rtp418141-0.133-0.3199No
100Slc25a2818171-0.134-0.3182No
101Psmb1018386-0.143-0.3231No
102Pim118431-0.144-0.3218No
103Ddx6018432-0.144-0.3189No
104Icam118701-0.154-0.3255No
105Sri18737-0.156-0.3236No
106Ripk218916-0.161-0.3268No
107Peli118963-0.162-0.3252No
108Usp1818988-0.163-0.3228No
109Cmklr119007-0.163-0.3201No
110Trafd119382-0.178-0.3301No
111Gpr1819488-0.181-0.3303No
112Cd3819498-0.182-0.3269No
113Ifi4419700-0.189-0.3304No
114Isg2019816-0.193-0.3306No
115H2-Aa20088-0.203-0.3364No
116Nlrc520373-0.213-0.3424No
117Sod220419-0.215-0.3397No
118Il1520739-0.222-0.3468No
119Il15ra20839-0.226-0.3458No
120Mx221235-0.243-0.3553No
121Il2rb21587-0.259-0.3628No
122Pde4b21804-0.265-0.3653No
123Ifi2721919-0.270-0.3640No
124Il721949-0.271-0.3595No
125Cxcl1022185-0.282-0.3623No
126Ncoa322293-0.287-0.3604No
127C1s122636-0.300-0.3668No
128Xaf123029-0.318-0.3746No
129Nmi23360-0.335-0.3798Yes
130Socs123497-0.342-0.3778Yes
131Itgb723561-0.346-0.3731Yes
132Cd4023935-0.367-0.3792Yes
133St8sia424104-0.376-0.3777Yes
134Fas24240-0.386-0.3747Yes
135Tap124249-0.386-0.3672Yes
136Sp11024253-0.386-0.3594Yes
137Rigi24285-0.388-0.3527Yes
138Gch124311-0.390-0.3456Yes
139Lysmd224746-0.417-0.3530Yes
140B2m24911-0.427-0.3503Yes
141Ly6e24913-0.427-0.3416Yes
142Nod125110-0.441-0.3398Yes
143Ifnar225407-0.466-0.3411Yes
144Tnfaip625413-0.467-0.3318Yes
145Ifitm325594-0.484-0.3285Yes
146Psmb925627-0.487-0.3198Yes
147Ifitm225708-0.494-0.3126Yes
148P2ry1425710-0.495-0.3026Yes
149Lgals3bp25733-0.497-0.2933Yes
150Nfkb125844-0.509-0.2869Yes
151Irf525856-0.511-0.2770Yes
152Zbp125884-0.514-0.2675Yes
153Stat325892-0.515-0.2573Yes
154Tnfsf1025938-0.519-0.2483Yes
155Plscr126038-0.531-0.2412Yes
156Casp126120-0.539-0.2331Yes
157Oas226159-0.543-0.2235Yes
158Vamp826221-0.551-0.2145Yes
159Marchf126285-0.559-0.2054Yes
160Psmb826287-0.560-0.1941Yes
161Auts226292-0.561-0.1828Yes
162Il10ra26322-0.565-0.1724Yes
163Casp726437-0.583-0.1647Yes
164Il626567-0.602-0.1571Yes
165Psme126572-0.603-0.1450Yes
166Nfkbia26726-0.625-0.1379Yes
167Btg126729-0.625-0.1252Yes
168Batf226731-0.626-0.1125Yes
169Txnip26885-0.656-0.1048Yes
170Vamp526889-0.657-0.0915Yes
171H2-DMa26921-0.663-0.0792Yes
172Epsti126990-0.678-0.0679Yes
173Stat427042-0.691-0.0556Yes
174Trim1427079-0.700-0.0427Yes
175Casp427125-0.716-0.0298Yes
176Eif4e327156-0.725-0.0161Yes
177Cd27427285-0.772-0.0051Yes
178Lcp227380-0.8180.0081Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE