DatasetMEP.MEP.ery_Pheno.cls
#Group2_versus_Group4.MEP.ery_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.4841468
Normalized Enrichment Score (NES)1.5688663
Nominal p-value0.049335863
FDR q-value0.5547571
FWER p-Value0.37
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Nek21680.9480.0114Yes
2Srsf12380.8700.0250Yes
3Hspa83740.7960.0348Yes
4Meis24580.7550.0457Yes
5Amd17050.6910.0495Yes
6Mcm28420.6540.0566Yes
7Sqle8860.6440.0669Yes
8Xpo19540.6360.0762Yes
9Kpnb110040.6280.0860Yes
10Bard110240.6230.0969Yes
11Hnrnpu10280.6220.1083Yes
12Ccnd110540.6160.1187Yes
13Lmnb111130.6050.1278Yes
14Dr113940.5660.1280Yes
15Chaf1a14840.5570.1351Yes
16Mcm514850.5570.1454Yes
17Upf114880.5570.1556Yes
18Espl114970.5560.1656Yes
19Cdc615200.5520.1750Yes
20Hnrnpd17220.5270.1774Yes
21Ccna217750.5190.1851Yes
22Racgap117800.5190.1945Yes
23Nsd219090.5080.1992Yes
24Odc119390.5060.2075Yes
25Ccnf21510.4920.2089Yes
26Rad2122280.4860.2151Yes
27Cdkn2c22660.4810.2227Yes
28Incenp24480.4630.2246Yes
29Bub124760.4610.2322Yes
30Smc1a24910.4590.2401Yes
31Cdk125040.4580.2481Yes
32Lbr25230.4560.2559Yes
33Prc125550.4530.2632Yes
34Kif2c26200.4480.2691Yes
35Mcm326820.4460.2751Yes
36Cenpf27490.4430.2809Yes
37Polq28830.4360.2841Yes
38Tfdp129040.4340.2914Yes
39Kif1129420.4310.2980Yes
40Tent4a30580.4240.3016Yes
41Sfpq30670.4230.3092Yes
42Top2a30730.4220.3168Yes
43Mybl233720.4030.3134Yes
44Cdc25a34210.3990.3190Yes
45Pole35420.3950.3219Yes
46Cul135560.3940.3287Yes
47Plk136490.3880.3325Yes
48Mcm636630.3870.3392Yes
49Kif437410.3840.3435Yes
50Prim237800.3820.3492Yes
51Uck240280.3700.3470Yes
52Mki6740330.3700.3537Yes
53Tra2b41170.3660.3574Yes
54Cks241220.3650.3640Yes
55Cenpe41260.3650.3707Yes
56Tacc341430.3650.3768Yes
57Plk441620.3620.3829Yes
58Syncrip41630.3620.3896Yes
59Chek141880.3610.3954Yes
60Odf242610.3570.3993Yes
61Hmmr42740.3560.4055Yes
62Nasp43360.3530.4098Yes
63Tpx243600.3520.4154Yes
64Kif1545790.3420.4138Yes
65H2az147090.3370.4153Yes
66Kif2347720.3350.4192Yes
67Ddx39a51680.3210.4108Yes
68G3bp151740.3200.4165Yes
69Tmpo52060.3180.4212Yes
70Srsf1053810.3140.4207Yes
71Suv39h155090.3060.4217Yes
72Rad54l55250.3050.4268Yes
73Rbl155610.3020.4311Yes
74Exo156600.2980.4330Yes
75Hira57400.2940.4356Yes
76Cul359290.2850.4340Yes
77Aurka59570.2840.4383Yes
78Prmt560180.2810.4413Yes
79Orc560820.2780.4441Yes
80Ttk63890.2690.4379Yes
81Ncl64590.2660.4403Yes
82Numa165030.2630.4436Yes
83Cdc765850.2590.4454Yes
84H2bc1266720.2540.4470Yes
85Fancc67130.2520.4502Yes
86Ccnt168030.2480.4515Yes
87Aurkb68770.2450.4534Yes
88Cul4a70250.2380.4524Yes
89Fbxo573700.2280.4441Yes
90Kif2275890.2220.4402Yes
91Tnpo277220.2170.4394Yes
92E2f377250.2170.4433Yes
93Dbf477310.2170.4472Yes
94Hus177420.2160.4508Yes
95Rad23b77510.2160.4545Yes
96E2f177870.2140.4572Yes
97Prpf4b78750.2110.4579Yes
98Wrn80960.2050.4536Yes
99Nup9881180.2040.4566Yes
100Nolc181350.2030.4598Yes
101E2f281420.2030.4633Yes
102Nup5082200.2000.4642Yes
103Cul582430.1990.4671Yes
104Brca283360.1950.4673Yes
105Mapk1483960.1930.4687Yes
106Smarcc184260.1910.4712Yes
107Slc7a185020.1890.4720Yes
108Ube2s85100.1890.4752Yes
109Pml85190.1880.4784Yes
110Cdc2786590.1820.4767Yes
111Ilf386640.1820.4799Yes
112Cdc25b87280.1790.4809Yes
113Pafah1b187310.1790.4841Yes
114Traip89360.1720.4799No
115Hmgb390420.1670.4791No
116Orc693070.1630.4725No
117Cdc4593200.1620.4751No
118Mad2l193740.1600.4761No
119Sap3094190.1580.4774No
120Casp8ap295510.1530.4755No
121Smc496500.1490.4746No
122Knl197120.1470.4751No
123Kif20b97280.1470.4773No
124Egf97740.1450.4783No
125Slc38a198440.1410.4784No
126Smc2101140.1390.4712No
127Ctcf103770.1290.4640No
128Map3k20104860.1250.4624No
129Ccnb2105270.1240.4632No
130Pola2105670.1220.4640No
131Jpt1105750.1210.4660No
132Ewsr1107850.1140.4605No
133Lig3108010.1130.4620No
134Stil108200.1130.4635No
135Gspt1108300.1120.4652No
136Abl1110380.1040.4596No
137Pds5b111160.1020.4587No
138Ezh2112970.0950.4538No
139Stmn1113100.0950.4552No
140Rasal2114550.0900.4516No
141Mtf2114670.0900.4528No
142Birc5114730.0900.4543No
143Pbk114920.0890.4553No
144E2f4116660.0830.4505No
145Cbx1117900.0780.4474No
146Ndc80119930.0700.4414No
147Stag1120660.0670.4400No
148Ss18122360.0600.4349No
149Ythdc1122500.0600.4356No
150Kif5b125680.0480.4249No
151Notch2127320.0420.4197No
152Katna1128170.0380.4174No
153Slc12a2128540.0370.4167No
154Atrx130890.0290.4087No
155Slc7a5131130.0280.4084No
156Top1132420.0240.4042No
157Snrpd1133620.0200.4002No
158Cenpa135110.0160.3951No
159Chmp1a136890.0110.3889No
160Efna5138150.0060.3844No
161Rpa2139250.0030.3805No
162Dtymk140080.0020.3776No
163Nusap114565-0.0060.3574No
164Gins214669-0.0100.3538No
165Dkc114749-0.0130.3512No
166Srsf214795-0.0150.3498No
167Cks1b15341-0.0340.3305No
168Arid4a15539-0.0420.3241No
169Cdkn1b15940-0.0550.3106No
170Troap16359-0.0700.2966No
171Hif1a16660-0.0810.2871No
172Bub316858-0.0880.2816No
173Smad317180-0.0990.2717No
174Mnat117192-0.1000.2731No
175Cdc2017402-0.1070.2675No
176Ube2c17631-0.1150.2613No
177Pttg117886-0.1240.2543No
178Kmt5a18166-0.1340.2466No
179Cdk419230-0.1720.2110No
180Bcl319273-0.1740.2127No
181Cdkn319384-0.1780.2120No
182Tle319993-0.1990.1935No
183Dmd20101-0.2040.1933No
184H2ax20878-0.2270.1692No
185H2az221169-0.2400.1631No
186Rps6ka521989-0.2730.1382No
187Hmga1b23410-0.3380.0927No
188Foxn323443-0.3390.0978No
189Myc23468-0.3410.1032No
190Marcks24360-0.3930.0779No
191Pura24582-0.4070.0774No
192Atf524989-0.4320.0706No
193Tgfb126829-0.6420.0153No
194Meis127051-0.6950.0201No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT