Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group2_versus_Group4.MEP.ery_Pheno.cls #Group2_versus_Group4_repos
Phenotype	MEP.ery_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.249524
Normalized Enrichment Score (NES)	-1.1342779
Nominal p-value	0.28816795
FDR q-value	0.6658719
FWER p-Value	0.956

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Lgals3	104	1.046	0.0188	No
2	Etf1	814	0.662	0.0073	No
3	Ccnd1	1054	0.616	0.0120	No
4	App	1198	0.592	0.0196	No
5	Eno2	1273	0.580	0.0294	No
6	Bgn	1348	0.572	0.0391	No
7	Pmaip1	1655	0.536	0.0395	No
8	Aifm3	1733	0.525	0.0481	No
9	Il1a	1854	0.513	0.0548	No
10	Plat	2193	0.488	0.0531	No
11	Slc20a1	2259	0.482	0.0611	No
12	Igf2r	2589	0.450	0.0589	No
13	Casp2	2632	0.447	0.0670	No
14	Ptk2	2687	0.446	0.0747	No
15	Mcl1	2696	0.445	0.0840	No
16	Fasl	2711	0.444	0.0931	No
17	Brca1	2927	0.433	0.0947	No
18	Top2a	3073	0.422	0.0985	No
19	Clu	3129	0.418	0.1056	No
20	Ppp3r1	3324	0.406	0.1073	No
21	Nefh	3364	0.403	0.1146	No
22	Gpx3	3634	0.388	0.1132	No
23	Gucy2e	3942	0.374	0.1101	No
24	Il1b	4091	0.367	0.1126	No
25	Btg3	4144	0.364	0.1186	No
26	Gsr	4324	0.354	0.1197	No
27	Plppr4	4615	0.340	0.1165	No
28	Igfbp6	4690	0.339	0.1212	No
29	F2	4967	0.326	0.1182	No
30	Erbb2	5136	0.321	0.1190	No
31	Timp1	5185	0.320	0.1242	No
32	Jun	5456	0.308	0.1210	No
33	Wee1	5473	0.308	0.1271	No
34	Ctnnb1	5850	0.289	0.1196	No
35	Bcl2l1	6038	0.280	0.1189	No
36	Lmna	6255	0.274	0.1169	No
37	Dnajc3	6721	0.252	0.1054	No
38	Dpyd	6842	0.247	0.1064	No
39	Bcl2l11	6892	0.244	0.1099	No
40	Ppp2r5b	6990	0.240	0.1115	No
41	Retsat	7172	0.233	0.1100	No
42	Mmp2	7764	0.215	0.0931	No
43	Bik	8046	0.207	0.0873	No
44	Bcl2l2	8677	0.182	0.0683	No
45	Sc5d	8689	0.181	0.0718	No
46	Cth	8705	0.180	0.0752	No
47	Cd2	8714	0.180	0.0788	No
48	Cdc25b	8728	0.179	0.0822	No
49	Casp9	9029	0.167	0.0749	No
50	Cd44	9068	0.166	0.0771	No
51	Psen2	10528	0.124	0.0266	No
52	Cd69	10540	0.123	0.0289	No
53	Dffa	10631	0.119	0.0282	No
54	Gadd45a	10847	0.112	0.0228	No
55	Pdcd4	11075	0.103	0.0167	No
56	Bcap31	11313	0.094	0.0101	No
57	Smad7	11668	0.082	-0.0010	No
58	Bid	11888	0.074	-0.0074	No
59	Il18	12679	0.044	-0.0352	No
60	Gpx4	12733	0.042	-0.0362	No
61	Cdk2	12800	0.039	-0.0378	No
62	Rhob	13022	0.031	-0.0452	No
63	Cyld	13091	0.029	-0.0470	No
64	Bmf	13201	0.026	-0.0504	No
65	Cd14	13321	0.021	-0.0543	No
66	Casp3	13385	0.020	-0.0562	No
67	Dnm1l	13813	0.006	-0.0716	No
68	Tgfb2	13827	0.006	-0.0720	No
69	Add1	14012	0.001	-0.0786	No
70	Ereg	14082	0.000	-0.0811	No
71	Egr3	14099	0.000	-0.0817	No
72	Vdac2	14956	-0.021	-0.1125	No
73	Rock1	15722	-0.048	-0.1393	No
74	Cdkn1b	15940	-0.055	-0.1460	No
75	Rhot2	15974	-0.057	-0.1460	No
76	Cav1	16174	-0.063	-0.1518	No
77	Psen1	16215	-0.065	-0.1519	No
78	Dnaja1	16279	-0.067	-0.1527	No
79	Sqstm1	16280	-0.067	-0.1513	No
80	Dap	16322	-0.069	-0.1513	No
81	Cdkn1a	16430	-0.073	-0.1536	No
82	Ank	16620	-0.079	-0.1588	No
83	Hmgb2	17091	-0.096	-0.1739	No
84	Sat1	17113	-0.097	-0.1725	No
85	Bcl10	17549	-0.112	-0.1860	No
86	Hmox1	17665	-0.116	-0.1876	No
87	Irf1	17838	-0.122	-0.1913	No
88	Casp8	17859	-0.123	-0.1893	No
89	Gadd45b	18345	-0.141	-0.2039	No
90	Crebbp	18347	-0.141	-0.2009	No
91	Gstm2	18447	-0.145	-0.2014	No
92	Fez1	18645	-0.152	-0.2053	No
93	Ddit3	18774	-0.158	-0.2065	No
94	Xiap	19046	-0.165	-0.2129	No
95	Gsn	19173	-0.170	-0.2138	No
96	Sptan1	19333	-0.176	-0.2158	No
97	Cd38	19498	-0.182	-0.2178	No
98	Bnip3l	19780	-0.192	-0.2239	No
99	Isg20	19816	-0.193	-0.2210	No
100	Tnf	19855	-0.194	-0.2182	No
101	Rela	19885	-0.195	-0.2150	No
102	Bax	19887	-0.196	-0.2108	No
103	Erbb3	19972	-0.198	-0.2096	No
104	Diablo	20073	-0.202	-0.2088	No
105	Dap3	20284	-0.211	-0.2119	No
106	Gpx1	20389	-0.214	-0.2111	No
107	Sod2	20419	-0.215	-0.2075	No
108	Bmp2	20622	-0.221	-0.2101	No
109	Ebp	20773	-0.223	-0.2107	No
110	Timp3	21201	-0.241	-0.2211	No
111	Pea15a	21238	-0.243	-0.2171	No
112	Tnfrsf12a	21244	-0.243	-0.2120	No
113	Pak1	21286	-0.245	-0.2082	No
114	Ppt1	21572	-0.258	-0.2130	No
115	Gna15	21684	-0.260	-0.2115	No
116	Emp1	21769	-0.264	-0.2088	No
117	Fdxr	21779	-0.264	-0.2034	No
118	Sod1	21865	-0.268	-0.2007	No
119	Atf3	22336	-0.288	-0.2116	No
120	Casp6	22355	-0.289	-0.2060	No
121	Dcn	22742	-0.305	-0.2135	No
122	Btg2	23080	-0.321	-0.2188	No
123	Ccnd2	23924	-0.367	-0.2416	Yes
124	Cflar	24003	-0.372	-0.2364	Yes
125	Fas	24240	-0.386	-0.2367	Yes
126	Ier3	24244	-0.386	-0.2284	Yes
127	Tap1	24249	-0.386	-0.2202	Yes
128	Mgmt	24284	-0.388	-0.2131	Yes
129	Gch1	24311	-0.390	-0.2056	Yes
130	Prf1	24365	-0.393	-0.1990	Yes
131	Lef1	24701	-0.413	-0.2023	Yes
132	Birc3	25255	-0.453	-0.2126	Yes
133	Rnasel	25273	-0.455	-0.2034	Yes
134	Anxa1	25290	-0.456	-0.1941	Yes
135	Tgfbr3	25432	-0.469	-0.1891	Yes
136	Satb1	25479	-0.473	-0.1806	Yes
137	Ifngr1	25570	-0.482	-0.1734	Yes
138	Ifitm3	25594	-0.484	-0.1638	Yes
139	Madd	25648	-0.488	-0.1552	Yes
140	Tnfsf10	25938	-0.519	-0.1545	Yes
141	F2r	26102	-0.537	-0.1488	Yes
142	Casp1	26120	-0.539	-0.1378	Yes
143	H1f0	26303	-0.562	-0.1322	Yes
144	Casp7	26437	-0.583	-0.1245	Yes
145	Il6	26567	-0.602	-0.1161	Yes
146	Krt18	26652	-0.615	-0.1059	Yes
147	Hgf	26671	-0.617	-0.0932	Yes
148	Tspo	26728	-0.625	-0.0817	Yes
149	Txnip	26885	-0.656	-0.0732	Yes
150	Rara	27025	-0.686	-0.0635	Yes
151	Casp4	27125	-0.716	-0.0516	Yes
152	Plcb2	27217	-0.746	-0.0388	Yes
153	Timp2	27302	-0.778	-0.0250	Yes
154	Nedd9	27317	-0.783	-0.0086	Yes
155	Pdgfrb	27477	-0.875	0.0046	Yes