Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group1_versus_Group4.MEP.ery_Pheno.cls #Group1_versus_Group4_repos
Phenotype	MEP.ery_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	-0.3538858
Normalized Enrichment Score (NES)	-1.2890795
Nominal p-value	0.14227642
FDR q-value	0.5183097
FWER p-Value	0.873

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ccnd1	73	1.031	0.0182	No
2	Icosl	226	0.824	0.0294	No
3	Fosb	248	0.812	0.0451	No
4	Ldlr	565	0.674	0.0473	No
5	Serpinb2	884	0.598	0.0478	No
6	Cebpd	904	0.592	0.0591	No
7	Dusp1	1281	0.537	0.0563	No
8	Fos	1465	0.516	0.0601	No
9	Birc2	1825	0.480	0.0567	No
10	Jun	1951	0.467	0.0616	No
11	Cebpb	2189	0.444	0.0620	No
12	Il1b	2222	0.438	0.0697	No
13	Ifit2	3332	0.373	0.0368	No
14	Ehd1	3759	0.350	0.0284	No
15	Socs3	4466	0.318	0.0091	No
16	Areg	4491	0.316	0.0146	No
17	Klf4	4645	0.311	0.0153	No
18	Il1a	4675	0.309	0.0205	No
19	Tnip2	5977	0.248	-0.0219	No
20	Mcl1	6270	0.234	-0.0278	No
21	Egr3	6648	0.225	-0.0369	No
22	Spsb1	6818	0.222	-0.0386	No
23	Cd44	6977	0.216	-0.0400	No
24	Il23a	7049	0.212	-0.0383	No
25	Sgk1	7361	0.200	-0.0456	No
26	Slc16a6	7404	0.198	-0.0431	No
27	Rcan1	7471	0.195	-0.0415	No
28	Il18	7501	0.194	-0.0387	No
29	Plau	7783	0.183	-0.0452	No
30	Zfp36	7851	0.180	-0.0440	No
31	Klf2	7902	0.178	-0.0422	No
32	Mxd1	7958	0.176	-0.0406	No
33	Hbegf	8005	0.175	-0.0388	No
34	Bcl6	8450	0.156	-0.0518	No
35	Inhba	8542	0.155	-0.0520	No
36	Tnip1	8942	0.151	-0.0635	No
37	Bmp2	9173	0.143	-0.0689	No
38	Atp2b1	9265	0.140	-0.0694	No
39	Smad3	9290	0.139	-0.0675	No
40	Tubb2a	9374	0.136	-0.0677	No
41	Lif	9494	0.132	-0.0694	No
42	Tsc22d1	9605	0.129	-0.0708	No
43	Dnajb4	9808	0.123	-0.0756	No
44	Sphk1	9923	0.119	-0.0774	No
45	Ccl5	10079	0.115	-0.0807	No
46	Lamb3	10210	0.110	-0.0832	No
47	Dusp5	10237	0.109	-0.0820	No
48	Tnfrsf9	10382	0.104	-0.0851	No
49	Kynu	10581	0.097	-0.0903	No
50	F2rl1	10818	0.089	-0.0971	No
51	Tiparp	10909	0.087	-0.0987	No
52	Dennd5a	10953	0.085	-0.0985	No
53	Il7r	11466	0.067	-0.1158	No
54	Clcf1	11510	0.066	-0.1160	No
55	Nampt	11552	0.064	-0.1162	No
56	Ccnl1	11630	0.061	-0.1178	No
57	Klf10	11648	0.061	-0.1172	No
58	Nr4a3	11757	0.058	-0.1199	No
59	Rnf19b	11825	0.056	-0.1213	No
60	Plk2	11893	0.053	-0.1226	No
61	Pdlim5	11929	0.052	-0.1228	No
62	B4galt1	12143	0.044	-0.1297	No
63	Egr2	12216	0.042	-0.1315	No
64	Pde4b	12314	0.039	-0.1342	No
65	Plpp3	12322	0.038	-0.1337	No
66	Slc2a6	12576	0.030	-0.1423	No
67	Phlda2	12588	0.030	-0.1421	No
68	Btg3	13214	0.011	-0.1647	No
69	Tnfaip2	13472	0.003	-0.1740	No
70	Tank	14389	-0.007	-0.2072	No
71	Ripk2	14762	-0.020	-0.2204	No
72	Slc2a3	14775	-0.021	-0.2204	No
73	Nfe2l2	14982	-0.029	-0.2273	No
74	Dusp2	15395	-0.044	-0.2415	No
75	Vegfa	15648	-0.051	-0.2496	No
76	Marcks	15827	-0.057	-0.2550	No
77	Snn	15857	-0.058	-0.2548	No
78	Cd80	15903	-0.059	-0.2553	No
79	Gfpt2	15992	-0.062	-0.2572	No
80	Btg2	16173	-0.067	-0.2625	No
81	Traf1	16213	-0.068	-0.2625	No
82	Serpinb8	16252	-0.069	-0.2625	No
83	Yrdc	16575	-0.078	-0.2726	No
84	Il6st	16788	-0.086	-0.2786	No
85	Ier2	17001	-0.093	-0.2845	No
86	Fosl1	17092	-0.097	-0.2858	No
87	Tnfaip6	17515	-0.112	-0.2989	No
88	Zbtb10	17536	-0.113	-0.2973	No
89	Map3k8	17626	-0.117	-0.2982	No
90	B4galt5	18128	-0.130	-0.3139	No
91	Il15ra	18347	-0.137	-0.3190	No
92	Cd83	18448	-0.141	-0.3198	No
93	Ppp1r15a	18563	-0.145	-0.3210	No
94	Pnrc1	18624	-0.147	-0.3202	No
95	Stat5a	18626	-0.147	-0.3173	No
96	Tlr2	18629	-0.148	-0.3143	No
97	Id2	18947	-0.160	-0.3227	No
98	Dusp4	19051	-0.163	-0.3231	No
99	Nfat5	19138	-0.167	-0.3228	No
100	Sat1	19214	-0.170	-0.3221	No
101	Ccrl2	19294	-0.174	-0.3215	No
102	Dram1	19365	-0.177	-0.3204	No
103	Irf1	19420	-0.180	-0.3188	No
104	Olr1	19492	-0.183	-0.3177	No
105	Nfkb2	19735	-0.192	-0.3226	No
106	Serpine1	19769	-0.193	-0.3199	No
107	Tnfaip8	20431	-0.215	-0.3396	No
108	Tap1	20823	-0.223	-0.3494	Yes
109	Sqstm1	20875	-0.226	-0.3466	Yes
110	Tnfaip3	20902	-0.228	-0.3430	Yes
111	Birc3	20915	-0.228	-0.3388	Yes
112	Cxcl10	20960	-0.230	-0.3357	Yes
113	Sod2	20995	-0.231	-0.3323	Yes
114	Ifih1	21039	-0.233	-0.3291	Yes
115	Bcl3	21068	-0.234	-0.3254	Yes
116	Gadd45b	21103	-0.236	-0.3218	Yes
117	Per1	21143	-0.237	-0.3184	Yes
118	Nr4a2	21417	-0.248	-0.3234	Yes
119	Plek	21441	-0.249	-0.3192	Yes
120	Phlda1	21443	-0.249	-0.3141	Yes
121	Tgif1	21523	-0.253	-0.3119	Yes
122	Rhob	21572	-0.255	-0.3085	Yes
123	Irs2	21618	-0.257	-0.3049	Yes
124	Cflar	21642	-0.258	-0.3005	Yes
125	Fjx1	21708	-0.260	-0.2976	Yes
126	Rela	21803	-0.260	-0.2958	Yes
127	Map2k3	21830	-0.261	-0.2914	Yes
128	Icam1	21859	-0.263	-0.2871	Yes
129	Ets2	22010	-0.270	-0.2871	Yes
130	Tnc	22017	-0.270	-0.2818	Yes
131	Trib1	22330	-0.282	-0.2875	Yes
132	Myc	22627	-0.295	-0.2923	Yes
133	Bhlhe40	22664	-0.296	-0.2876	Yes
134	Maff	22992	-0.311	-0.2932	Yes
135	Pmepa1	22996	-0.311	-0.2870	Yes
136	Btg1	23207	-0.318	-0.2883	Yes
137	Klf9	23292	-0.323	-0.2848	Yes
138	Kdm6b	23383	-0.327	-0.2814	Yes
139	Gem	23391	-0.328	-0.2750	Yes
140	Nr4a1	23606	-0.339	-0.2759	Yes
141	Gadd45a	23618	-0.339	-0.2695	Yes
142	Tnfsf9	23780	-0.349	-0.2683	Yes
143	Tnf	23851	-0.352	-0.2637	Yes
144	Nfkbie	24002	-0.360	-0.2618	Yes
145	F3	24006	-0.360	-0.2546	Yes
146	Cxcl5	24338	-0.375	-0.2591	Yes
147	Sdc4	24630	-0.391	-0.2618	Yes
148	Panx1	24638	-0.392	-0.2541	Yes
149	Jag1	24641	-0.392	-0.2462	Yes
150	Gch1	24747	-0.399	-0.2419	Yes
151	Klf6	24767	-0.401	-0.2345	Yes
152	Ifngr2	24824	-0.405	-0.2283	Yes
153	Trip10	24860	-0.407	-0.2214	Yes
154	Egr1	24901	-0.409	-0.2145	Yes
155	Fosl2	25244	-0.428	-0.2183	Yes
156	Ptger4	25325	-0.432	-0.2125	Yes
157	Cd69	25551	-0.448	-0.2116	Yes
158	Gpr183	25562	-0.448	-0.2029	Yes
159	Ier3	25854	-0.473	-0.2039	Yes
160	Atf3	25861	-0.473	-0.1945	Yes
161	Nfil3	26035	-0.490	-0.1909	Yes
162	Litaf	26059	-0.492	-0.1817	Yes
163	Ier5	26148	-0.500	-0.1748	Yes
164	Pfkfb3	26167	-0.502	-0.1653	Yes
165	Ptpre	26171	-0.503	-0.1552	Yes
166	Fut4	26302	-0.515	-0.1495	Yes
167	Zc3h12a	26345	-0.520	-0.1405	Yes
168	Rel	26368	-0.522	-0.1307	Yes
169	Eif1	26406	-0.526	-0.1213	Yes
170	Rigi	26660	-0.560	-0.1192	Yes
171	Plaur	26767	-0.578	-0.1114	Yes
172	Ninj1	26824	-0.590	-0.1014	Yes
173	Il6	26888	-0.600	-0.0916	Yes
174	Relb	26917	-0.608	-0.0803	Yes
175	Abca1	27010	-0.631	-0.0708	Yes
176	Junb	27209	-0.680	-0.0642	Yes
177	Nfkb1	27240	-0.689	-0.0514	Yes
178	Nfkbia	27291	-0.710	-0.0388	Yes
179	Hes1	27347	-0.735	-0.0259	Yes
180	Csf1	27498	-0.847	-0.0142	Yes
181	Cdkn1a	27527	-0.885	0.0027	Yes