DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group4.MEP.ery_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.468354
Normalized Enrichment Score (NES)-1.7773554
Nominal p-value0.024439918
FDR q-value0.15139996
FWER p-Value0.07
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Prnp19140.470-0.0310No
2Mgst145120.315-0.0995No
3Gpx447840.303-0.0845No
4Stk2569250.217-0.1443No
5Scaf477820.183-0.1604No
6Gpx379290.176-0.1513No
7Txnrd283970.158-0.1553No
8Mpo102110.110-0.2120No
9Gsr104590.101-0.2127No
10Ptpa110550.082-0.2276No
11Mbp113320.071-0.2318No
12Lsp1115110.066-0.2328No
13Oxsr1119270.052-0.2436No
14Srxn1119480.051-0.2402No
15Gclc119940.050-0.2377No
16Msra120950.046-0.2376No
17Hmox2121070.046-0.2343No
18G6pdx128760.020-0.2605No
19Ipcef1131130.015-0.2679No
20Gclm133830.006-0.2771No
21Txnrd114507-0.012-0.3169No
22Abcc116137-0.066-0.3707No
23Sbno216819-0.087-0.3883No
24Ercc217251-0.103-0.3955No
25Nqo118295-0.135-0.4223No
26Pfkp19566-0.186-0.4531Yes
27Egln219792-0.194-0.4454Yes
28Cat20051-0.200-0.4384Yes
29Pdlim120118-0.203-0.4242Yes
30Sod220995-0.231-0.4370Yes
31Ndufs221522-0.253-0.4354Yes
32Cdkn2d22316-0.282-0.4411Yes
33Prdx122498-0.288-0.4241Yes
34Prdx422700-0.297-0.4071Yes
35Fes22767-0.300-0.3849Yes
36Prdx223725-0.345-0.3914Yes
37Prdx623889-0.354-0.3683Yes
38Atox124067-0.363-0.3449Yes
39Glrx224124-0.365-0.3171Yes
40Glrx24496-0.382-0.2992Yes
41Sod126496-0.538-0.3277Yes
42Hhex26842-0.592-0.2917Yes
43Ftl126900-0.603-0.2444Yes
44Ndufa626954-0.615-0.1959Yes
45Txn127047-0.640-0.1468Yes
46Lamtor527093-0.650-0.0953Yes
47Junb27209-0.680-0.0438Yes
48Selenos27288-0.7080.0114Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY