DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group4.MEP.ery_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_P53_PATHWAY
Enrichment Score (ES)-0.31449664
Normalized Enrichment Score (NES)-1.35577
Nominal p-value0.11022044
FDR q-value0.46542743
FWER p-Value0.772
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_P53_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Cd825990.665-0.0097No
2Clca27360.629-0.0031No
3Rxra7780.6180.0067No
4Stom8800.5990.0140No
5Epha29980.5780.0203No
6Plk313310.5300.0179No
7Ccp11013740.5260.0259No
8Slc35d113840.5250.0352No
9Fgf1314580.5170.0420No
10Fos14650.5160.0512No
11Tgfa16530.4950.0535No
12Upp118320.4790.0558No
13Jun19510.4670.0600No
14Serpinb520250.4620.0658No
15Slc19a226450.4140.0508No
16Ephx129810.3880.0457No
17Aen34440.3650.0355No
18Nudt1536180.3580.0357No
19Tob136710.3550.0403No
20Tchh36980.3540.0459No
21Rb137410.3510.0508No
22Ak139410.3380.0497No
23Hexim139760.3360.0546No
24Rad51c43420.3220.0472No
25Klf446450.3110.0419No
26Il1a46750.3090.0465No
27Mknk246820.3080.0519No
28Zmat348300.3010.0520No
29Perp51180.2870.0468No
30Fbxw752160.2820.0484No
31Foxo353630.2790.0482No
32Ctsd56000.2650.0445No
33Sfn57310.2600.0445No
34Abcc557570.2590.0483No
35Cdh1357660.2580.0527No
36Gls262020.2380.0412No
37Elp163070.2330.0417No
38H2ac2563110.2330.0459No
39Cyfip263510.2310.0487No
40Rgs1665500.2290.0456No
41Slc3a265660.2280.0493No
42Rhbdf268670.2200.0423No
43Hspa4l68770.2200.0460No
44Traf469000.2190.0492No
45Pvt170090.2140.0492No
46Pcna70590.2110.0513No
47Polh72610.2040.0477No
48Ddb278750.1790.0286No
49Mxd179580.1760.0288No
50Hbegf80050.1750.0304No
51Sp180580.1720.0316No
52Csrnp282410.1650.0280No
53Wwp184370.1570.0238No
54Tm4sf185150.1550.0238No
55Blcap90290.1490.0078No
56Ada91320.1440.0067No
57Bmp291730.1430.0079No
58Lif94940.132-0.0014No
59Rap2b95320.131-0.0003No
60Tsc22d196050.129-0.0006No
61Ralgds98890.121-0.0087No
62Sphk199230.119-0.0077No
63Itgb4100410.116-0.0099No
64Cdkn2aip103030.107-0.0174No
65Notch1107660.091-0.0326No
66Slc7a11107940.090-0.0320No
67Cdk5r1109190.086-0.0349No
68Sesn1109630.085-0.0349No
69H1f2109710.084-0.0336No
70Irag2109860.084-0.0326No
71Hmox1116340.061-0.0551No
72Cdkn2b116350.061-0.0540No
73Pidd1116610.060-0.0538No
74Rad9a117170.059-0.0547No
75Osgin1117680.057-0.0555No
76Mdm2118040.056-0.0557No
77Rnf19b118250.056-0.0554No
78Coq8a118800.054-0.0564No
79Plk2118930.053-0.0559No
80Cd81120280.049-0.0599No
81Kif13b122200.042-0.0661No
82Tspyl2123190.038-0.0690No
83Nol8124120.035-0.0717No
84Steap3124200.035-0.0713No
85Pom121131880.012-0.0990No
86Tm7sf3133650.007-0.1053No
87S100a4137580.000-0.1196No
88Xpc14318-0.005-0.1399No
89Ip6k214379-0.007-0.1420No
90Ercc514494-0.011-0.1459No
91Ei2414629-0.016-0.1506No
92Phlda314630-0.016-0.1503No
93Vwa5a14802-0.022-0.1561No
94Retsat14996-0.030-0.1626No
95Prkab115111-0.033-0.1661No
96Ccnk15555-0.049-0.1814No
97Tnni115620-0.051-0.1828No
98Vdr16025-0.062-0.1964No
99Btg216173-0.067-0.2006No
100Rchy116586-0.078-0.2142No
101Apaf116635-0.080-0.2144No
102Ppm1d16901-0.090-0.2225No
103Rab40c16959-0.092-0.2229No
104Fam162a16990-0.093-0.2223No
105Fuca117042-0.095-0.2224No
106Trafd117114-0.098-0.2232No
107Hdac317312-0.105-0.2285No
108Abhd417396-0.108-0.2295No
109Klk817653-0.118-0.2367No
110Jag217736-0.121-0.2374No
111Ccng117843-0.125-0.2390No
112Baiap218376-0.138-0.2559No
113Dgka18507-0.143-0.2580No
114Ldhb18526-0.144-0.2560No
115Wrap7318548-0.145-0.2542No
116Ppp1r15a18563-0.145-0.2520No
117Ddit318680-0.149-0.2535No
118F2r18815-0.155-0.2556No
119Sat119214-0.170-0.2670No
120Dram119365-0.177-0.2692No
121Cdkn2a19613-0.188-0.2748No
122Acvr1b19661-0.189-0.2730No
123Hras19982-0.198-0.2811No
124Fdxr19992-0.198-0.2778No
125Txnip20096-0.202-0.2778No
126Bax20389-0.213-0.2846No
127Iscu20796-0.222-0.2953No
128Tap120823-0.223-0.2922No
129Ddit420884-0.227-0.2902No
130Zbtb1620892-0.227-0.2863No
131Cgrrf120908-0.228-0.2827No
132Ctsf21077-0.234-0.2845No
133Dnttip221089-0.235-0.2806No
134Prmt221194-0.240-0.2801No
135Ifi3021289-0.243-0.2790No
136Eps8l221331-0.245-0.2761No
137Mapkapk321383-0.247-0.2734No
138Plxnb221951-0.267-0.2892No
139Tprkb22363-0.284-0.2990No
140Tax1bp322789-0.301-0.3090Yes
141Procr22802-0.302-0.3039Yes
142Bak123042-0.313-0.3069Yes
143Alox823048-0.313-0.3013Yes
144Btg123207-0.318-0.3013Yes
145Rrp823230-0.319-0.2962Yes
146Pitpnc123244-0.320-0.2909Yes
147Zfp36l123271-0.322-0.2859Yes
148Trp5323343-0.326-0.2825Yes
149Gadd45a23618-0.339-0.2863Yes
150Rps1223658-0.341-0.2815Yes
151Ptpn1423729-0.345-0.2777Yes
152Triap123775-0.348-0.2730Yes
153Tnfsf923780-0.349-0.2668Yes
154Pmm123916-0.356-0.2652Yes
155St1423960-0.358-0.2602Yes
156Trp6324059-0.363-0.2571Yes
157Pdgfa24367-0.375-0.2615Yes
158Zfp36524369-0.375-0.2546Yes
159Sdc124421-0.377-0.2496Yes
160Def624487-0.382-0.2449Yes
161Sec61a124728-0.398-0.2464Yes
162Hint125041-0.414-0.2502Yes
163Irak125242-0.427-0.2497Yes
164Casp125284-0.429-0.2433Yes
165Tcn225495-0.444-0.2429Yes
166Rpl1825570-0.449-0.2373Yes
167Cebpa25627-0.452-0.2311Yes
168Sertad325632-0.452-0.2230Yes
169Ankra225745-0.463-0.2186Yes
170Ndrg125771-0.465-0.2110Yes
171Rrad25776-0.466-0.2026Yes
172Ier325854-0.473-0.1967Yes
173Atf325861-0.473-0.1883Yes
174Tgfb125986-0.486-0.1839Yes
175Nupr126005-0.487-0.1757Yes
176H2aj26089-0.495-0.1696Yes
177Rpl3626110-0.496-0.1613Yes
178Ier526148-0.500-0.1535Yes
179Ptpre26171-0.503-0.1451Yes
180Dcxr26612-0.553-0.1510Yes
181Vamp826613-0.553-0.1409Yes
182Abat26615-0.554-0.1308Yes
183Gm2a26643-0.558-0.1215Yes
184Rack126682-0.566-0.1126Yes
185Rps27l26716-0.571-0.1033Yes
186Socs126766-0.578-0.0945Yes
187Trib326777-0.579-0.0843Yes
188Ninj126824-0.590-0.0752Yes
189Ccnd226874-0.597-0.0660Yes
190Tpd52l126936-0.611-0.0571Yes
191Ccnd327146-0.663-0.0525Yes
192Fas27259-0.696-0.0439Yes
193App27322-0.724-0.0329Yes
194Mxd427328-0.727-0.0198Yes
195S100a1027351-0.737-0.0071Yes
196Cdkn1a27527-0.8850.0027Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_P53_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_P53_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_P53_PATHWAY