DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group4.MEP.ery_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.4900271
Normalized Enrichment Score (NES)-1.5896295
Nominal p-value0.100616015
FDR q-value0.46328655
FWER p-Value0.338
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Pdha18740.600-0.0203No
2Hccs15150.508-0.0338No
3Dld17770.485-0.0340No
4Pdhx18990.472-0.0293No
5Lrpprc28200.397-0.0551No
6Hspa933240.373-0.0663No
7Atp6v0c37060.354-0.0733No
8Sucla244630.318-0.0948No
9Dlst46280.312-0.0947No
10Gpx447840.303-0.0945No
11Mtrr51720.284-0.1032No
12Afg3l251890.283-0.0983No
13Atp6ap156880.262-0.1114No
14Atp6v1c160270.246-0.1190No
15Atp6v1h60500.244-0.1150No
16Tomm70a69260.217-0.1428No
17Opa170110.214-0.1417No
18Ndufs170190.214-0.1378No
19Mgst370240.214-0.1338No
20Mrps2277080.186-0.1552No
21Immt77810.183-0.1543No
22Pmpca79500.176-0.1570No
23Hadhb81530.169-0.1611No
24Gm1005385800.155-0.1736No
25Cox1089400.151-0.1838No
26Dlat90150.149-0.1836No
27Mpc191160.145-0.1845No
28Oat95310.131-0.1970No
29Slc25a1296110.129-0.1974No
30Abcb798840.121-0.2050No
31Maob104100.103-0.2222No
32Mfn2105300.099-0.2246No
33Cox15105460.098-0.2233No
34Alas1110760.081-0.2410No
35Mtx2111340.078-0.2416No
36Pdp1111550.078-0.2408No
37Ogdh114290.068-0.2494No
38Rhot2114310.068-0.2481No
39Nqo2115000.066-0.2494No
40Supv3l1119770.050-0.2657No
41Atp1b1120860.046-0.2688No
42Sdha121250.045-0.2693No
43Acadm122870.040-0.2744No
44Sdhd124110.035-0.2782No
45Mrps11125750.030-0.2836No
46Idh3a132740.009-0.3088No
47Atp6v0e14207-0.001-0.3428No
48Cyb5a14501-0.012-0.3533No
49Fxn14509-0.012-0.3533No
50Fh114686-0.017-0.3594No
51Ndufs414691-0.018-0.3592No
52Rhot114789-0.021-0.3623No
53Retsat14996-0.030-0.3692No
54Ndufa515210-0.037-0.3763No
55Vdac115290-0.040-0.3784No
56Acat115292-0.040-0.3777No
57Ndufs315322-0.041-0.3779No
58Ndufa915363-0.043-0.3786No
59Gpi115816-0.056-0.3940No
60Oxa1l15842-0.057-0.3938No
61Mrps3015958-0.061-0.3968No
62Aco216379-0.072-0.4107No
63Cox7a2l16473-0.075-0.4127No
64Etfa16608-0.079-0.4160No
65Cs16675-0.081-0.4169No
66Cox1116848-0.088-0.4214No
67Mtrf116913-0.090-0.4220No
68Got217426-0.109-0.4386No
69Mdh217791-0.123-0.4495No
70Aifm117792-0.123-0.4471No
71Ndufb217916-0.127-0.4491No
72Etfdh17956-0.128-0.4481No
73Pdhb18115-0.129-0.4514No
74Ndufb518220-0.133-0.4526No
75Glud118281-0.135-0.4522No
76Fdx118299-0.135-0.4502No
77Atp6v1g118384-0.139-0.4506No
78Atp6v1d18395-0.139-0.4482No
79Acaa1a18405-0.140-0.4459No
80Ldhb18526-0.144-0.4475No
81Hadha18587-0.146-0.4468No
82Htra218712-0.151-0.4484No
83Vdac319083-0.165-0.4588No
84Atp6v1e119359-0.177-0.4654No
85Uqcr1119498-0.183-0.4669No
86Cox1719575-0.186-0.4660No
87Vdac219754-0.193-0.4688No
88Mrpl1119842-0.196-0.4682No
89Ndufa720110-0.203-0.4740No
90Idh220190-0.206-0.4729No
91Nnt20373-0.212-0.4755No
92Bax20389-0.213-0.4719No
93Iscu20796-0.222-0.4824No
94Uqcrh20817-0.223-0.4788No
95Uqcrc120824-0.224-0.4747No
96Acadsb21244-0.241-0.4854Yes
97Grpel121259-0.241-0.4812Yes
98Suclg121373-0.246-0.4806Yes
99Surf121500-0.252-0.4803Yes
100Ndufs221522-0.253-0.4762Yes
101Cox7c21578-0.256-0.4733Yes
102Idh121824-0.261-0.4772Yes
103Tcirg121854-0.262-0.4732Yes
104Timm17a21915-0.265-0.4702Yes
105Ndufb321925-0.265-0.4654Yes
106Ndufv122026-0.270-0.4639Yes
107Timm922050-0.271-0.4595Yes
108Casp722057-0.272-0.4544Yes
109Cyc122154-0.276-0.4526Yes
110Timm8b22169-0.277-0.4478Yes
111Sdhb22208-0.279-0.4438Yes
112Por22322-0.282-0.4424Yes
113Mrpl3522358-0.284-0.4382Yes
114Bdh222419-0.286-0.4349Yes
115Cyb5r322542-0.291-0.4337Yes
116Acaa222543-0.291-0.4281Yes
117Cox7a222547-0.291-0.4226Yes
118Ech122557-0.292-0.4173Yes
119Ndufs622618-0.295-0.4138Yes
120Mrpl1522709-0.298-0.4113Yes
121Acadvl22720-0.298-0.4059Yes
122AK15730222721-0.298-0.4002Yes
123Uqcrc222799-0.302-0.3971Yes
124Cpt1a23231-0.319-0.4067Yes
125Idh3g23270-0.322-0.4019Yes
126Echs123426-0.329-0.4012Yes
127Eci123604-0.339-0.4011Yes
128Prdx323637-0.340-0.3957Yes
129Polr2f23676-0.342-0.3904Yes
130Ndufab123774-0.348-0.3873Yes
131Ndufb623786-0.349-0.3809Yes
132Ndufv223998-0.360-0.3817Yes
133Phb224137-0.366-0.3796Yes
134Sdhc24147-0.366-0.3729Yes
135Aldh6a124306-0.373-0.3714Yes
136Timm1324330-0.375-0.3650Yes
137Uqcrfs124650-0.393-0.3691Yes
138Timm5024690-0.396-0.3629Yes
139Uqcrq24877-0.407-0.3618Yes
140Cox7b24883-0.408-0.3541Yes
141Ndufa824898-0.409-0.3467Yes
142Mdh124903-0.409-0.3390Yes
143Uqcr1025084-0.417-0.3375Yes
144Ndufb725093-0.418-0.3297Yes
145Slc25a325339-0.433-0.3303Yes
146Ndufs725343-0.434-0.3220Yes
147Idh3b25522-0.446-0.3199Yes
148Timm1025666-0.455-0.3163Yes
149Cox6c25694-0.459-0.3084Yes
150Cox4i125756-0.464-0.3017Yes
151Cox6b125759-0.464-0.2928Yes
152Phyh25914-0.479-0.2891Yes
153Ndufb825917-0.479-0.2800Yes
154Atp6v0b25991-0.486-0.2732Yes
155Atp5pb25994-0.487-0.2639Yes
156Decr126011-0.488-0.2551Yes
157Ldha26050-0.491-0.2470Yes
158Slc25a526078-0.493-0.2384Yes
159Tomm2226129-0.498-0.2306Yes
160Cox8a26313-0.516-0.2273Yes
161Ndufc126317-0.516-0.2175Yes
162Ndufc226362-0.522-0.2090Yes
163Ndufs826393-0.525-0.2000Yes
164Ndufa426401-0.526-0.1901Yes
165Bckdha26438-0.530-0.1811Yes
166Mrps1526611-0.553-0.1767Yes
167Hsd17b1026723-0.571-0.1697Yes
168Uqcrb26897-0.603-0.1644Yes
169Slc25a2026937-0.611-0.1540Yes
170Ndufa626954-0.615-0.1427Yes
171Cox5a26975-0.622-0.1314Yes
172Mrps1226987-0.624-0.1198Yes
173Etfb27053-0.641-0.1098Yes
174Slc25a1127087-0.648-0.0985Yes
175Atp6v1f27189-0.672-0.0892Yes
176Ndufa127213-0.681-0.0768Yes
177Cox5b27245-0.692-0.0646Yes
178Ndufa227286-0.707-0.0524Yes
179Mrpl3427309-0.718-0.0393Yes
180Slc25a427361-0.746-0.0268Yes
181Cox6a127505-0.858-0.0154Yes
182Ndufa327564-0.9810.0014Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION