DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group4.MEP.ery_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.46945837
Normalized Enrichment Score (NES)-1.4789137
Nominal p-value0.08167331
FDR q-value0.38220057
FWER p-Value0.542
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1C1s16060.664-0.0097No
2Ciita7410.628-0.0028No
3Lats29270.5880.0015No
4Irf49830.5800.0103No
5Upp118320.479-0.0116No
6Znfx120430.459-0.0107No
7Cfh23380.432-0.0133No
8Fpr123410.432-0.0053No
9Ifit233320.373-0.0345No
10Nup9333600.370-0.0285No
11Ido143590.321-0.0589No
12Socs344660.318-0.0568No
13Jak247120.307-0.0600No
14Il4ra48500.300-0.0594No
15Vcam150790.289-0.0623No
16Slamf751420.286-0.0592No
17Cmtr158720.252-0.0811No
18Cd7461420.241-0.0864No
19Bank165610.228-0.0973No
20Pml72860.202-0.1199No
21Wars175230.193-0.1249No
22Il18bp80570.172-0.1412No
23Myd8882170.166-0.1438No
24St3gal583770.159-0.1467No
25Arid5b89450.151-0.1645No
26Arl4a89820.150-0.1630No
27Ptpn192850.140-0.1714No
28Cfb96800.127-0.1834No
29Cd8698140.123-0.1860No
30Ccl5100790.115-0.1935No
31Rapgef6101950.110-0.1956No
32Irf5107270.092-0.2132No
33Rnf31109490.085-0.2197No
34Pnpt1110500.082-0.2218No
35Samd9l112510.074-0.2277No
36Fcgr1112880.073-0.2277No
37Tapbp114640.067-0.2328No
38Nampt115520.064-0.2348No
39Serping1115530.064-0.2335No
40Sppl2a118770.054-0.2443No
41Rbck1121230.045-0.2524No
42Rnf213122140.042-0.2549No
43Irf8122380.041-0.2550No
44Pde4b123140.039-0.2570No
45Helz2124880.033-0.2627No
46Fgl2124950.033-0.2623No
47Trim26126160.029-0.2661No
48Pla2g4a126270.028-0.2659No
49Samhd1127870.023-0.2713No
50Hif1a130150.016-0.2793No
51Tnfaip2134720.003-0.2958No
52Trim21135680.000-0.2993No
53Psmb214662-0.017-0.3388No
54Ripk214762-0.020-0.3421No
55Stat214822-0.023-0.3438No
56Oas314831-0.023-0.3436No
57Il2rb15066-0.032-0.3516No
58Cmklr115076-0.032-0.3513No
59Lap315406-0.044-0.3625No
60Trim2515471-0.046-0.3640No
61Rsad215477-0.046-0.3633No
62Adar15747-0.054-0.3721No
63Tor1b15845-0.057-0.3745No
64Ncoa316385-0.072-0.3928No
65Isoc116482-0.075-0.3949No
66Irf216623-0.080-0.3985No
67Eif2ak216881-0.089-0.4062No
68Trafd117114-0.098-0.4129No
69Bpgm17124-0.098-0.4114No
70Mx217315-0.105-0.4163No
71Tnfaip617515-0.112-0.4215No
72Stat117701-0.120-0.4260No
73Cmpk217734-0.121-0.4249No
74Peli117787-0.123-0.4245No
75Parp1417816-0.124-0.4232No
76Parp1217841-0.125-0.4217No
77Pnp18282-0.135-0.4352No
78Il15ra18347-0.137-0.4350No
79Tdrd718766-0.153-0.4474No
80Ripk118855-0.156-0.4477No
81Ptpn618918-0.158-0.4470No
82Ifit318919-0.158-0.4440No
83Casp818983-0.161-0.4433No
84Psma219086-0.165-0.4439No
85Sspn19335-0.176-0.4497No
86Irf119420-0.180-0.4493No
87Pfkp19566-0.186-0.4512No
88Il719770-0.193-0.4549No
89Casp319964-0.197-0.4583No
90Txnip20096-0.202-0.4593No
91Ptpn220233-0.208-0.4604No
92Sri20429-0.215-0.4634No
93Psma320547-0.220-0.4636No
94Ube2l620579-0.221-0.4606No
95Tap120823-0.223-0.4653Yes
96Tnfaip320902-0.228-0.4639Yes
97Cxcl1020960-0.230-0.4616Yes
98Irf920977-0.231-0.4579Yes
99Sod220995-0.231-0.4542Yes
100Ifih121039-0.233-0.4514Yes
101Ifi3021289-0.243-0.4559Yes
102Lysmd221316-0.244-0.4523Yes
103Psme221339-0.245-0.4485Yes
104Oasl121422-0.248-0.4469Yes
105Herc621504-0.252-0.4451Yes
106Icam121859-0.263-0.4531Yes
107Cd3821928-0.266-0.4506Yes
108Ogfr21933-0.266-0.4458Yes
109Casp722057-0.272-0.4452Yes
110Irf722108-0.274-0.4419Yes
111Il1522116-0.274-0.4370Yes
112Itgb722230-0.280-0.4359Yes
113Slc25a2822348-0.283-0.4348Yes
114Ifi3522492-0.288-0.4347Yes
115Mvp22751-0.299-0.4385Yes
116Btg123207-0.318-0.4491Yes
117Pim123272-0.322-0.4454Yes
118Mthfd223388-0.328-0.4435Yes
119Isg2023530-0.335-0.4423Yes
120Lcp223635-0.340-0.4398Yes
121Dhx5823636-0.340-0.4334Yes
122Stat323737-0.346-0.4306Yes
123Nmi23912-0.355-0.4303Yes
124Cd4023951-0.357-0.4250Yes
125Nod124169-0.367-0.4260Yes
126Marchf124229-0.369-0.4212Yes
127Auts224270-0.372-0.4157Yes
128Selp24397-0.376-0.4133Yes
129H2-DMa24577-0.388-0.4126Yes
130Ifi2724632-0.392-0.4072Yes
131Plscr124667-0.394-0.4011Yes
132Isg1524677-0.395-0.3940Yes
133Gch124747-0.399-0.3891Yes
134Sp11024756-0.399-0.3819Yes
135Zbp124885-0.408-0.3789Yes
136Nlrc525252-0.428-0.3842Yes
137Casp125284-0.429-0.3773Yes
138St8sia425348-0.434-0.3715Yes
139Ddx6025485-0.443-0.3682Yes
140Cd6925551-0.448-0.3622Yes
141Eif4e325557-0.448-0.3540Yes
142Cd27425572-0.449-0.3461Yes
143H2-Aa25609-0.451-0.3389Yes
144Tnfsf1025620-0.452-0.3308Yes
145Usp1825673-0.456-0.3242Yes
146Trim1425707-0.460-0.3168Yes
147Psmb925742-0.462-0.3094Yes
148P2ry1425752-0.464-0.3010Yes
149Xaf125870-0.474-0.2964Yes
150Ifnar225938-0.482-0.2899Yes
151Bst225968-0.484-0.2819Yes
152Lgals3bp26032-0.490-0.2750Yes
153Stat426340-0.518-0.2765Yes
154Epsti126580-0.549-0.2749Yes
155Vamp826613-0.553-0.2657Yes
156Gbp326646-0.559-0.2564Yes
157Rigi26660-0.560-0.2464Yes
158Psmb1026706-0.569-0.2374Yes
159Ifi4426755-0.575-0.2284Yes
160Socs126766-0.578-0.2180Yes
161Il626888-0.600-0.2111Yes
162Vamp526949-0.614-0.2018Yes
163Rtp426956-0.617-0.1905Yes
164Casp427030-0.637-0.1812Yes
165Il10ra27037-0.638-0.1695Yes
166Oas227098-0.652-0.1595Yes
167Batf227106-0.654-0.1475Yes
168Ifitm227201-0.676-0.1383Yes
169Nfkb127240-0.689-0.1268Yes
170Fas27259-0.696-0.1144Yes
171Nfkbia27291-0.710-0.1022Yes
172Psmb827345-0.734-0.0904Yes
173Ifitm327355-0.740-0.0769Yes
174Ly6e27410-0.772-0.0644Yes
175Psme127492-0.841-0.0516Yes
176Cdkn1a27527-0.885-0.0363Yes
177B2m27547-0.915-0.0199Yes
178Gpr1827597-1.1670.0002Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE