DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group4.MEP.ery_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)-0.35688818
Normalized Enrichment Score (NES)-1.3371431
Nominal p-value0.12277228
FDR q-value0.45479152
FWER p-Value0.819
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Best1930.9980.0150No
2Tacr11630.8890.0290No
3Icosl2260.8240.0419No
4Ldlr5650.6740.0421No
5Cd825990.6650.0531No
6Ros16080.6630.0651No
7Ccr711590.5550.0553No
8Il1r111960.5480.0641No
9Nod213340.5300.0689No
10Nmur113810.5250.0769No
11Slc7a217690.4860.0718No
12Cxcr621010.4530.0681No
13Il1b22220.4380.0718No
14Fpr123410.4320.0755No
15Mefv24850.4260.0782No
16Atp2a225250.4230.0846No
17Slc31a126510.4130.0876No
18Cybb30690.3840.0795No
19Cd1437360.3520.0617No
20Lpar143340.3220.0459No
21Slc11a245070.3150.0455No
22Timp146270.3120.0469No
23Il1a46750.3090.0509No
24Il4ra48500.3000.0501No
25Kcnj248830.2970.0544No
26Cd7056030.2650.0331No
27Nlrp358060.2560.0305No
28Irak258540.2530.0334No
29Adora2b60120.2460.0323No
30Prok264050.2290.0222No
31Rgs1665500.2290.0212No
32Tlr168010.2230.0162No
33Adgre168030.2230.0203No
34Ptgir68590.2200.0223No
35Adrm173830.1990.0069No
36Il1875010.1940.0062No
37Clec5a76050.1900.0060No
38Dcbld278080.1820.0020No
39Mxd179580.176-0.0002No
40Hbegf80050.1750.0014No
41Inhba85420.155-0.0153No
42Sema4d92440.141-0.0383No
43Atp2b192650.140-0.0364No
44Gnai393390.138-0.0365No
45Lif94940.132-0.0397No
46Itga596040.129-0.0413No
47Abi198560.122-0.0482No
48Slc7a198730.121-0.0465No
49Sphk199230.119-0.0461No
50Ccl5100790.115-0.0496No
51Raf1103430.106-0.0573No
52Tnfrsf9103820.104-0.0567No
53Rasgrp1112240.075-0.0860No
54Tapbp114640.067-0.0935No
55Il7r114660.067-0.0923No
56Sell114980.066-0.0922No
57Nampt115520.064-0.0930No
58Ptger2117050.059-0.0974No
59Atp2c1119120.053-0.1039No
60Pde4b123140.039-0.1178No
61Tlr3127280.025-0.1324No
62Aqp9128640.021-0.1370No
63Hif1a130150.016-0.1421No
64Has2137800.000-0.1700No
65Itgb8137990.000-0.1707No
66Ereg138240.000-0.1715No
67C3ar1138570.000-0.1727No
68Ifnar114521-0.012-0.1966No
69Lamp314618-0.015-0.1999No
70Kcnmb214729-0.019-0.2035No
71Ripk214762-0.020-0.2043No
72Il2rb15066-0.032-0.2148No
73Cmklr115076-0.032-0.2145No
74Fzd515269-0.039-0.2208No
75Mmp1415277-0.040-0.2203No
76Icam415334-0.042-0.2216No
77Gp1ba15367-0.043-0.2220No
78Tacr315489-0.047-0.2255No
79Ebi315545-0.049-0.2266No
80Psen115552-0.049-0.2259No
81Msr116096-0.064-0.2446No
82Il18rap16105-0.064-0.2437No
83Btg216173-0.067-0.2449No
84Sgms216501-0.076-0.2554No
85Eif2ak216881-0.089-0.2676No
86Tnfrsf1b17097-0.097-0.2736No
87Met17115-0.098-0.2724No
88P2rx717292-0.104-0.2769No
89Tnfaip617515-0.112-0.2829No
90Kif1b17632-0.117-0.2850No
91Csf3r18266-0.134-0.3056No
92Il15ra18347-0.137-0.3060No
93Scn1b18574-0.146-0.3115No
94Tlr218629-0.148-0.3108No
95Ccrl219294-0.174-0.3318No
96Irf119420-0.180-0.3330No
97Slc31a219444-0.181-0.3305No
98Hpn19464-0.181-0.3279No
99Olr119492-0.183-0.3255No
100Acvr1b19661-0.189-0.3281No
101Hrh119751-0.192-0.3278No
102Serpine119769-0.193-0.3248No
103Npffr219984-0.198-0.3290No
104Rnf144b20166-0.205-0.3318No
105Il1020270-0.209-0.3317No
106Calcrl20304-0.210-0.3290No
107Gpc320366-0.212-0.3273No
108Ccl1720406-0.214-0.3248No
109Sri20429-0.215-0.3216No
110Cxcl1020960-0.230-0.3367No
111Stab121099-0.235-0.3374No
112Osmr21197-0.240-0.3365No
113Acvr2a21469-0.250-0.3418No
114Lck21535-0.253-0.3394No
115Rela21803-0.260-0.3444No
116Icam121859-0.263-0.3415No
117Sele21895-0.264-0.3379No
118Irf722108-0.274-0.3406No
119Il1522116-0.274-0.3358No
120Myc22627-0.295-0.3489No
121Ptafr22629-0.295-0.3435No
122Rhog22694-0.297-0.3404No
123Tnfsf1522866-0.305-0.3410No
124P2ry223031-0.312-0.3412No
125Mep1a23061-0.314-0.3364No
126Pik3r523623-0.340-0.3506Yes
127Lcp223635-0.340-0.3447Yes
128Tnfsf923780-0.349-0.3435Yes
129Il18r123803-0.350-0.3379Yes
130Nmi23912-0.355-0.3352Yes
131Cd4023951-0.357-0.3300Yes
132Pdpn23968-0.358-0.3240Yes
133F324006-0.360-0.3187Yes
134Axl24136-0.366-0.3166Yes
135Slc1a224328-0.374-0.3167Yes
136Cxcl524338-0.375-0.3101Yes
137Slc4a424458-0.380-0.3074Yes
138Scarf124477-0.381-0.3010Yes
139Gch124747-0.399-0.3034Yes
140Klf624767-0.401-0.2967Yes
141Ifngr224824-0.405-0.2913Yes
142Cx3cl125130-0.420-0.2946Yes
143Gpr13225317-0.432-0.2934Yes
144Ptger425325-0.432-0.2857Yes
145Gna1525376-0.436-0.2795Yes
146Cd6925551-0.448-0.2776Yes
147Slamf125559-0.448-0.2695Yes
148Gpr18325562-0.448-0.2613Yes
149Slc28a225605-0.451-0.2545Yes
150Tnfsf1025620-0.452-0.2467Yes
151P2rx425916-0.479-0.2486Yes
152Lyn25918-0.480-0.2398Yes
153Bst225968-0.484-0.2326Yes
154Pcdh725993-0.487-0.2245Yes
155Ptpre26171-0.503-0.2216Yes
156Rgs126182-0.504-0.2127Yes
157Kcna326407-0.526-0.2111Yes
158Pvr26451-0.532-0.2029Yes
159Gabbr126456-0.532-0.1932Yes
160Itgb326733-0.572-0.1927Yes
161Plaur26767-0.578-0.1832Yes
162Il626888-0.600-0.1765Yes
163Rtp426956-0.617-0.1675Yes
164Abca127010-0.631-0.1578Yes
165Ifitm127018-0.633-0.1464Yes
166Il10ra27037-0.638-0.1352Yes
167Ahr27165-0.668-0.1275Yes
168Emp327188-0.672-0.1159Yes
169Nfkb127240-0.689-0.1050Yes
170Selenos27288-0.708-0.0937Yes
171Nfkbia27291-0.710-0.0806Yes
172Osm27296-0.713-0.0676Yes
173Cd4827359-0.740-0.0562Yes
174Ly6e27410-0.772-0.0437Yes
175Csf127498-0.847-0.0313Yes
176Cdkn1a27527-0.885-0.0159Yes
177Ffar227573-1.0080.0011Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE