DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group4.MEP.ery_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.41961065
Normalized Enrichment Score (NES)1.4123057
Nominal p-value0.1744186
FDR q-value0.63778096
FWER p-Value0.67
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ccnd1731.0310.0187Yes
2Sqle3070.7790.0263Yes
3Nek27240.6320.0242Yes
4Kpnb17770.6190.0351Yes
5Bard18380.6070.0455Yes
6Hnrnpd8400.6070.0580Yes
7Xpo19070.5920.0678Yes
8Rad219600.5850.0780Yes
9Mcm511890.5490.0811Yes
10Mcm212680.5390.0894Yes
11Chaf1a14680.5150.0928Yes
12Hnrnpu14740.5140.1032Yes
13Espl114900.5120.1133Yes
14Upf115130.5080.1230Yes
15H2bc1216110.5000.1298Yes
16Lmnb116980.4910.1368Yes
17Dr118700.4740.1404Yes
18Lbr19250.4690.1481Yes
19Srsf119320.4680.1576Yes
20Tfdp119880.4640.1652Yes
21Amd121110.4520.1701Yes
22Cdc621690.4450.1772Yes
23Nsd222320.4370.1840Yes
24Incenp22940.4350.1907Yes
25Cdkn2c23170.4340.1989Yes
26Mcm323740.4320.2058Yes
27Mcm624500.4290.2119Yes
28Odc127020.4080.2112Yes
29Hspa827150.4060.2192Yes
30Sfpq27740.4010.2254Yes
31Cenpf28980.3940.2290Yes
32Ccnf29490.3910.2353Yes
33Mybl230470.3860.2397Yes
34Exo132740.3760.2393Yes
35Ube2s35400.3620.2371Yes
36Rbl137150.3530.2380Yes
37E2f237650.3500.2435Yes
38Polq38250.3450.2485Yes
39Cdc25a38280.3450.2555Yes
40Syncrip38730.3420.2610Yes
41Prim239740.3360.2643Yes
42Numa141230.3350.2659Yes
43Kif2c42070.3300.2697Yes
44Top2a43360.3220.2717Yes
45Egf44840.3160.2728Yes
46Kif1145130.3150.2783Yes
47Slc12a246110.3120.2812Yes
48Pole46360.3110.2868Yes
49Tra2b46500.3100.2927Yes
50Bub146630.3090.2987Yes
51Prc146850.3080.3043Yes
52Cul146870.3080.3107Yes
53Smc1a47320.3050.3154Yes
54Nasp47810.3030.3199Yes
55Uck247880.3030.3259Yes
56G3bp148530.3000.3298Yes
57Tent4a48710.2980.3354Yes
58Ewsr150060.2920.3365Yes
59Cdc4550490.2900.3410Yes
60Nup9850780.2890.3459Yes
61E2f351580.2850.3489Yes
62Nup5051730.2840.3543Yes
63Chek152130.2820.3587Yes
64Cdk153840.2780.3582Yes
65Fancc54230.2760.3625Yes
66Racgap154350.2750.3678Yes
67Rad23b56750.2630.3646Yes
68Tnpo256800.2630.3699Yes
69Kif1557350.2600.3733Yes
70Tmpo58270.2540.3752Yes
71Rad54l58440.2530.3799Yes
72Srsf1060450.2450.3776Yes
73Tacc360670.2430.3819Yes
74Ccna260900.2420.3861Yes
75Ccnt161200.2420.3900Yes
76Cul361240.2410.3949Yes
77Mki6762040.2380.3970Yes
78Cenpe62950.2340.3985Yes
79Odf263230.2330.4023Yes
80Hira68260.2220.3886Yes
81Hus168850.2200.3910Yes
82Cks269560.2160.3930Yes
83Ilf370480.2120.3940Yes
84Kif2270630.2110.3979Yes
85Smarcc170740.2110.4019Yes
86Hmmr70790.2100.4061Yes
87Kif470800.2100.4104Yes
88Pml72860.2020.4071Yes
89Abl173100.2010.4105Yes
90Cdc773430.2010.4135Yes
91E2f173630.2000.4169Yes
92Kif2374750.1950.4169Yes
93Suv39h176040.1900.4161Yes
94Plk477790.1830.4136Yes
95Wrn78230.1810.4158Yes
96Cdc25b79270.1760.4157Yes
97Fbxo579490.1760.4185Yes
98Map3k2080190.1740.4196Yes
99Cul583320.1610.4116No
100Tpx283840.1590.4130No
101Brca284240.1570.4148No
102Mapk1484610.1560.4167No
103Lig388370.1550.4063No
104Aurka88960.1520.4073No
105Traip89030.1520.4102No
106Plk189780.1500.4106No
107Smad392900.1390.4022No
108Ddx39a93860.1360.4015No
109Orc594190.1350.4031No
110Katna194280.1340.4056No
111Stag194850.1330.4063No
112Aurkb97010.1260.4011No
113Rasal297140.1250.4032No
114Cdc2797170.1250.4058No
115Pds5b97680.1240.4065No
116Pola298620.1210.4056No
117Slc7a198730.1210.4078No
118Ttk99090.1200.4090No
119Cul4a99110.1200.4114No
120Ncl99750.1170.4115No
121Prpf4b100390.1170.4116No
122Ss18100730.1150.4128No
123Casp8ap2102680.1080.4080No
124Stil102850.1080.4096No
125Dtymk103960.1040.4078No
126Smc2103970.1040.4099No
127Srsf2105820.0970.4052No
128Slc38a1106590.0940.4044No
129Dbf4108460.0890.3994No
130Ccnb2109820.0840.3962No
131Nolc1110140.0830.3968No
132Knl1110150.0830.3986No
133Kif20b110220.0830.4000No
134Ezh2110340.0820.4013No
135Ctcf111420.0780.3991No
136Pafah1b1113740.0700.3921No
137Efna5113860.0690.3931No
138Gspt1114410.0680.3925No
139Atrx114770.0670.3926No
140Mnat1116240.0620.3886No
141Ythdc1118470.0550.3816No
142Mtf2118900.0540.3812No
143Smc4121610.0440.3723No
144Notch2121690.0440.3729No
145H2az1122680.0400.3702No
146Arid4a128500.0210.3494No
147Hif1a130150.0160.3438No
148Hmgb3131240.0140.3401No
149Prmt5132550.0100.3356No
150Gins2133560.0070.3321No
151Orc614529-0.0130.2896No
152Pbk14736-0.0190.2825No
153Kif5b14916-0.0270.2765No
154Chmp1a15263-0.0390.2647No
155Ndc8015365-0.0430.2619No
156Slc7a515379-0.0430.2623No
157E2f415447-0.0450.2608No
158Marcks15827-0.0570.2481No
159Mad2l116000-0.0620.2431No
160Bub316188-0.0670.2377No
161Rpa216428-0.0730.2305No
162Jpt116433-0.0740.2319No
163Cbx116800-0.0860.2203No
164Cdkn1b16875-0.0890.2195No
165Top117041-0.0950.2154No
166Tle317131-0.0980.2142No
167Nusap117538-0.1130.2017No
168Stmn118113-0.1290.1834No
169Foxn318137-0.1300.1853No
170Dkc118227-0.1330.1848No
171Pttg118836-0.1550.1658No
172Troap19193-0.1690.1563No
173Cenpa19741-0.1920.1404No
174Snrpd119749-0.1920.1441No
175Sap3020324-0.2110.1275No
176Rps6ka521066-0.2340.1053No
177Bcl321068-0.2340.1101No
178Cdc2021269-0.2420.1078No
179Cks1b21363-0.2460.1095No
180Birc521427-0.2490.1123No
181Ube2c21455-0.2500.1165No
182H2ax21809-0.2600.1090No
183Dmd21869-0.2630.1123No
184Meis221990-0.2690.1135No
185Kmt5a22213-0.2790.1112No
186Myc22627-0.2950.1022No
187Cdk423242-0.3200.0864No
188Meis124990-0.4130.0312No
189H2az225248-0.4280.0307No
190Cdkn325332-0.4330.0366No
191Pura25812-0.4680.0288No
192Tgfb125986-0.4860.0326No
193Atf526327-0.5180.0309No
194Hmga1b27380-0.7530.0081No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT