DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group4.MEP.ery_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.38834897
Normalized Enrichment Score (NES)1.1891139
Nominal p-value0.3468208
FDR q-value0.73570716
FWER p-Value0.96
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ipo74040.7280.0002Yes
2Dck6290.6580.0056Yes
3Bard18380.6070.0105Yes
4Hnrnpd8400.6070.0230Yes
5Xpo19070.5920.0328Yes
6Rad219600.5850.0429Yes
7Timeless11810.5500.0462Yes
8Mcm511890.5490.0573Yes
9Mcm212680.5390.0655Yes
10Ccp11013740.5260.0725Yes
11Espl114900.5120.0789Yes
12Wdr9015350.5080.0877Yes
13Cse1l16240.4990.0948Yes
14Lmnb116980.4910.1022Yes
15Melk18870.4730.1051Yes
16Lbr19250.4690.1134Yes
17Srsf119320.4680.1228Yes
18Mcm419730.4650.1309Yes
19Dlgap519940.4630.1397Yes
20Dnmt121210.4510.1444Yes
21Hells21410.4490.1530Yes
22Cdkn2c23170.4340.1555Yes
23Mcm323740.4320.1624Yes
24Ncapd224480.4290.1685Yes
25Mcm624500.4290.1773Yes
26Nup10725190.4250.1836Yes
27Atad227850.4000.1822Yes
28Slbp29570.3900.1839Yes
29Mybl230470.3860.1886Yes
30Smc333330.3720.1859Yes
31Ube2s35400.3620.1858Yes
32Rpa135930.3590.1913Yes
33Rbbp736740.3550.1957Yes
34Ccne137630.3500.1997Yes
35Wee138150.3460.2050Yes
36Cdc25a38280.3450.2117Yes
37Syncrip38730.3420.2171Yes
38Prim239740.3360.2204Yes
39Nop5642010.3300.2189Yes
40Kif2c42070.3300.2255Yes
41Brms1l42140.3300.2321Yes
42Zw1042460.3270.2377Yes
43Brca142580.3270.2440Yes
44Top2a43360.3220.2479Yes
45Rad51c43420.3220.2543Yes
46Prps143630.3210.2602Yes
47Nap1l146090.3120.2577Yes
48Pole46360.3110.2631Yes
49Tra2b46500.3100.2691Yes
50Smc1a47320.3050.2724Yes
51Ssrp147610.3040.2776Yes
52Nasp47810.3030.2832Yes
53Ubr747930.3030.2890Yes
54Tfrc49060.2960.2910Yes
55Tk150000.2920.2936Yes
56Mms22l51480.2850.2942Yes
57Nup20551530.2850.2999Yes
58Chek152130.2820.3035Yes
59Diaph353230.2810.3053Yes
60Cdk153840.2780.3089Yes
61Prkdc54110.2760.3136Yes
62Racgap154350.2750.3184Yes
63Cbx554920.2710.3220Yes
64Lig155040.2710.3272Yes
65Kif18b56130.2650.3287Yes
66Xrcc658010.2560.3271Yes
67Tmpo58270.2540.3315Yes
68Tacc360670.2430.3277Yes
69Pnn60940.2420.3318Yes
70Mki6762040.2380.3327Yes
71Spag562520.2360.3358Yes
72Cenpe62950.2340.3391Yes
73Mcm767960.2230.3255Yes
74Hus168850.2200.3268Yes
75Cks269560.2160.3287Yes
76Eed70150.2140.3310Yes
77Ilf370480.2120.3342Yes
78Pcna70590.2110.3382Yes
79Kif2270630.2110.3424Yes
80Anp32e70640.2110.3467Yes
81Hmmr70790.2100.3506Yes
82Kif470800.2100.3549Yes
83Tbrg471420.2080.3569Yes
84Bub1b71710.2070.3602Yes
85Msh272100.2050.3630Yes
86Cit72110.2050.3672Yes
87Pold174150.1980.3639Yes
88Rrm274430.1960.3669Yes
89Mre11a74790.1950.3697Yes
90Spc2575200.1930.3722Yes
91Dclre1b75840.1910.3738Yes
92Suv39h176040.1900.3770Yes
93Depdc1a77510.1840.3755Yes
94Plk477790.1830.3783Yes
95Psmc3ip77940.1820.3815Yes
96Cdca878100.1810.3847Yes
97Cdc25b79270.1760.3841Yes
98Rfc180380.1740.3837Yes
99Orc281360.1690.3836Yes
100Tubb581440.1690.3869Yes
101Cnot981980.1670.3883Yes
102Brca284240.1570.3834No
103Nbn88470.1550.3712No
104Aurka88960.1520.3725No
105Plk189780.1500.3727No
106Ing390330.1480.3738No
107Cenpm91220.1450.3735No
108E2f891260.1450.3764No
109Nup15391280.1450.3793No
110Ddx39a93860.1360.3728No
111Stag194850.1330.3719No
112Dscc195650.1300.3717No
113Aurkb97010.1260.3694No
114Pds5b97680.1240.3695No
115Mlh198290.1230.3699No
116Pola298620.1210.3712No
117Eif2s1102970.1070.3576No
118Pms2103270.1060.3587No
119Srsf2105820.0970.3514No
120Phf5a106220.0960.3520No
121Ccnb2109820.0840.3406No
122Nolc1110140.0830.3412No
123Ezh2110340.0820.3422No
124Rad51ap1110350.0820.3439No
125Ctcf111420.0780.3416No
126Rad50112090.0750.3408No
127Gspt1114410.0680.3337No
128Gins3114440.0680.3350No
129Pan2114990.0660.3344No
130Ppp1r8117540.0580.3264No
131Gins4119310.0520.3210No
132Gins1119990.0500.3196No
133Pold3120430.0480.3190No
134Smc4121610.0440.3156No
135Usp1122590.0410.3129No
136H2az1122680.0400.3135No
137Ube2t122980.0390.3132No
138Rfc3123700.0370.3114No
139Rfc2127250.0250.2990No
140Trip13127470.0240.2987No
141Exosc8128200.0220.2966No
142Psip1128450.0210.2961No
143Donson129920.0170.2912No
144Hmgb3131240.0140.2867No
145Ung14333-0.0060.2427No
146Orc614529-0.0130.2358No
147Dek14824-0.0230.2256No
148Asf1b14885-0.0260.2239No
149Tipin15176-0.0360.2141No
150Tcf1915521-0.0480.2025No
151Chek215705-0.0530.1969No
152Ak215947-0.0600.1894No
153Mad2l116000-0.0620.1888No
154Paics16037-0.0630.1887No
155Smc616166-0.0660.1854No
156Pold216410-0.0730.1781No
157Rpa216428-0.0730.1790No
158Jpt116433-0.0740.1803No
159Cdkn1b16875-0.0890.1661No
160Ppm1d16901-0.0900.1670No
161Rad117065-0.0960.1630No
162Dut17175-0.1000.1611No
163Luc7l317700-0.1200.1444No
164Stmn118113-0.1290.1321No
165Lyar18304-0.1350.1279No
166Shmt118466-0.1420.1250No
167Pole418637-0.1480.1218No
168Pttg118836-0.1550.1178No
169Nudt2118958-0.1600.1167No
170Mxd319045-0.1630.1169No
171Rnaseh2a19474-0.1820.1050No
172Cdkn2a19613-0.1880.1038No
173Cdca319697-0.1900.1047No
174Lsm819946-0.1960.0997No
175Hmgb220070-0.2010.0994No
176Asf1a20238-0.2080.0976No
177Pa2g420393-0.2130.0963No
178Spc2420980-0.2310.0797No
179Cdc2021269-0.2420.0742No
180Cks1b21363-0.2460.0758No
181Birc521427-0.2490.0787No
182Pop721646-0.2580.0760No
183H2ax21809-0.2600.0755No
184Snrpb21817-0.2610.0806No
185Ranbp122102-0.2740.0759No
186Myc22627-0.2950.0628No
187Prdx422700-0.2970.0663No
188Cdk423242-0.3200.0532No
189Trp5323343-0.3260.0562No
190Mthfd223388-0.3280.0614No
191Tubg124174-0.3670.0403No
192Rpa324597-0.3890.0329No
193Cdkn325332-0.4330.0150No
194Ran26022-0.489-0.0000No
195Nme126109-0.4960.0070No
196Dctpp127126-0.660-0.0164No
197Hmga1b27380-0.753-0.0102No
198Cdkn1a27527-0.8850.0027No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS