DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group3.MEP.ery_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.52377796
Normalized Enrichment Score (NES)-1.5678941
Nominal p-value0.043032788
FDR q-value1.0
FWER p-Value0.407
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gpx411780.469-0.0045No
2Stk2519000.3950.0015No
3Prnp39340.277-0.0497No
4Txnrd273930.153-0.1628No
5Scaf475070.149-0.1547No
6Gclc80790.132-0.1647No
7Msra90170.104-0.1902No
8Lsp1108250.051-0.2516No
9Pdlim1113570.036-0.2680No
10Oxsr1116740.028-0.2772No
11Mbp119160.023-0.2841No
12Ptpa122000.015-0.2931No
13Glrx213983-0.024-0.3558No
14Ipcef114066-0.026-0.3567No
15Abcc114989-0.052-0.3859No
16Gclm15166-0.058-0.3876No
17G6pdx15267-0.061-0.3862No
18Hmox215486-0.068-0.3886No
19Srxn115609-0.071-0.3872No
20Ercc216579-0.098-0.4144No
21Sbno216606-0.099-0.4072No
22Sod217222-0.119-0.4199No
23Gsr17825-0.135-0.4307No
24Fes18118-0.142-0.4297No
25Egln218544-0.155-0.4325No
26Prdx218926-0.168-0.4327No
27Txnrd119126-0.174-0.4257No
28Prdx620492-0.219-0.4573No
29Ndufa622324-0.284-0.5006Yes
30Ndufs222911-0.307-0.4969Yes
31Lamtor523288-0.325-0.4840Yes
32Sod123311-0.326-0.4583Yes
33Prdx123464-0.333-0.4367Yes
34Mgst123498-0.334-0.4106Yes
35Glrx23691-0.342-0.3898Yes
36Atox124009-0.360-0.3719Yes
37Ftl124331-0.380-0.3525Yes
38Prdx424413-0.385-0.3241Yes
39Cat24790-0.406-0.3046Yes
40Mpo25255-0.430-0.2864Yes
41Pfkp25423-0.440-0.2566Yes
42Txn125533-0.449-0.2239Yes
43Hhex25641-0.458-0.1905Yes
44Nqo126388-0.536-0.1738Yes
45Gpx326642-0.577-0.1360Yes
46Selenos26757-0.599-0.0913Yes
47Junb27170-0.688-0.0502Yes
48Cdkn2d27421-0.8080.0066Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY