DatasetMEP.MEP.ery_Pheno.cls
#Group1_versus_Group3.MEP.ery_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeMEP.ery_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.41244945
Normalized Enrichment Score (NES)-1.238919
Nominal p-value0.36237624
FDR q-value0.6280858
FWER p-Value0.915
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gpx411780.469-0.0317No
2Dld25900.347-0.0748No
3Hspa926370.343-0.0682No
4Lrpprc31310.317-0.0785No
5Pdha132890.307-0.0769No
6Atp6v1h33620.302-0.0722No
7Ndufs134860.295-0.0696No
8Mgst335020.295-0.0630No
9Afg3l236330.289-0.0608No
10Hccs36800.286-0.0556No
11Dlst37170.284-0.0501No
12Sucla238310.281-0.0474No
13Mtrr44200.254-0.0627No
14Acadm52590.223-0.0879No
15Oat53780.218-0.0870No
16Supv3l154190.216-0.0833No
17Pdhx60530.193-0.1017No
18Ndufs361030.190-0.0989No
19Abcb762010.187-0.0979No
20Atp6v1c162460.185-0.0951No
21Opa162680.184-0.0914No
22Atp6ap165920.173-0.0990No
23Cpt1a66170.172-0.0957No
24Fdx166380.172-0.0923No
25Cox7a2l70150.159-0.1022No
26Pmpca70620.157-0.1001No
27Atp6v1e176980.143-0.1198No
28Rhot277960.140-0.1200No
29Etfdh79610.135-0.1227No
30Tomm70a82450.128-0.1299No
31Mtx282580.127-0.1273No
32Mfn285540.118-0.1352No
33Immt87860.110-0.1410No
34Mrps1197430.082-0.1739No
35Cox1598210.080-0.1748No
36Idh3a100290.075-0.1805No
37Cyb5a101850.070-0.1845No
38Fh1104700.061-0.1934No
39Atp6v0c109130.048-0.2083No
40Ndufa9109450.047-0.2083No
41Acaa1a110170.045-0.2098No
42Etfa112540.039-0.2175No
43Dlat115640.031-0.2280No
44Rhot1116230.029-0.2294No
45Mrps30116240.029-0.2287No
46Ogdh118620.024-0.2368No
47Vdac1120970.018-0.2449No
48Hadhb124470.008-0.2574No
49Cox10124890.006-0.2588No
50Got2127160.001-0.2670No
51Atp6v0e127210.001-0.2671No
52Iscu13688-0.015-0.3019No
53Glud113698-0.016-0.3019No
54Ndufa513957-0.023-0.3108No
55Cox1113995-0.024-0.3115No
56Pdhb14100-0.027-0.3147No
57Hadha14325-0.034-0.3220No
58Fxn14457-0.037-0.3259No
59Maob14480-0.038-0.3258No
60Slc25a1214494-0.038-0.3254No
61Sdha14534-0.039-0.3258No
62Pdp114591-0.041-0.3269No
63Aco215165-0.058-0.3464No
64Ndufs415438-0.066-0.3547No
65Uqcr1115568-0.070-0.3578No
66Mpc115615-0.071-0.3577No
67Mdh215730-0.075-0.3601No
68Oxa1l16158-0.086-0.3736No
69Aifm116233-0.087-0.3742No
70Nqo216288-0.089-0.3740No
71Uqcrh16339-0.090-0.3737No
72Grpel116367-0.091-0.3724No
73Uqcrc116412-0.093-0.3718No
74Idh116588-0.099-0.3758No
75Cox1716612-0.099-0.3743No
76Timm8b16646-0.101-0.3730No
77Mrpl1116737-0.103-0.3738No
78Cox7c16749-0.103-0.3717No
79Htra216787-0.105-0.3706No
80Prdx317080-0.114-0.3785No
81Gm1005317246-0.119-0.3816No
82Aldh6a117482-0.124-0.3872No
83Atp6v1d17901-0.138-0.3991No
84Timm17a18267-0.147-0.4089Yes
85Ndufb318326-0.149-0.4075Yes
86Ndufb518365-0.150-0.4052Yes
87Acat118436-0.151-0.4041Yes
88AK15730218532-0.155-0.4039Yes
89Alas118584-0.157-0.4020Yes
90Vdac218662-0.159-0.4009Yes
91Mtrf118702-0.161-0.3985Yes
92Nnt18706-0.161-0.3947Yes
93Mdh118744-0.162-0.3922Yes
94Atp1b118862-0.166-0.3924Yes
95Ech118884-0.167-0.3892Yes
96Suclg118935-0.168-0.3870Yes
97Cox6c18940-0.168-0.3831Yes
98Vdac319003-0.171-0.3812Yes
99Acadsb19089-0.173-0.3801Yes
100Phyh19127-0.174-0.3773Yes
101Bckdha19149-0.175-0.3738Yes
102Gpi119155-0.175-0.3698Yes
103Ndufv219179-0.176-0.3664Yes
104Ndufab119383-0.184-0.3694Yes
105Cs19424-0.185-0.3664Yes
106Idh219819-0.200-0.3759Yes
107Mrpl1519922-0.204-0.3747Yes
108Sdhd19923-0.204-0.3698Yes
109Ndufc120092-0.209-0.3709Yes
110Ndufb620108-0.210-0.3664Yes
111Surf120161-0.212-0.3632Yes
112Acadvl20465-0.218-0.3690Yes
113Ndufs620519-0.221-0.3656Yes
114Casp720674-0.227-0.3657Yes
115Sdhb20784-0.227-0.3642Yes
116Cyb5r320925-0.233-0.3637Yes
117Por21198-0.243-0.3678Yes
118Mrps2221270-0.246-0.3645Yes
119Ndufa721364-0.250-0.3618Yes
120Tcirg121547-0.258-0.3623Yes
121Eci121915-0.267-0.3692Yes
122Idh3g22021-0.271-0.3665Yes
123Mrps1522040-0.272-0.3606Yes
124Slc25a1122124-0.276-0.3570Yes
125Timm922152-0.278-0.3513Yes
126Cox7a222211-0.280-0.3466Yes
127Echs122285-0.283-0.3425Yes
128Ndufv122321-0.284-0.3369Yes
129Ndufa622324-0.284-0.3301Yes
130Acaa222394-0.288-0.3257Yes
131Sdhc22442-0.290-0.3205Yes
132Phb222466-0.291-0.3143Yes
133Mrpl3522565-0.295-0.3107Yes
134Cox7b22605-0.297-0.3050Yes
135Ndufs822791-0.300-0.3045Yes
136Timm1322838-0.303-0.2989Yes
137Ndufs222911-0.307-0.2941Yes
138Atp6v1g122925-0.308-0.2872Yes
139Bax23025-0.313-0.2833Yes
140Polr2f23028-0.313-0.2758Yes
141Uqcrq23074-0.314-0.2699Yes
142Ndufb723082-0.314-0.2626Yes
143Ndufb223284-0.324-0.2621Yes
144Ndufs723440-0.332-0.2598Yes
145Slc25a323457-0.332-0.2523Yes
146Uqcrc223615-0.338-0.2499Yes
147Idh3b23760-0.345-0.2468Yes
148Slc25a2023821-0.349-0.2406Yes
149Cox8a24166-0.371-0.2443Yes
150Bdh224340-0.381-0.2414Yes
151Retsat24387-0.384-0.2338Yes
152Ndufa124399-0.385-0.2250Yes
153Ndufa824428-0.387-0.2167Yes
154Tomm2224430-0.387-0.2074Yes
155Mrps1224497-0.387-0.2005Yes
156Uqcrfs124517-0.388-0.1918Yes
157Ndufa224530-0.389-0.1829Yes
158Atp6v0b24745-0.403-0.1810Yes
159Cox4i124930-0.412-0.1777Yes
160Atp5pb24991-0.416-0.1699Yes
161Decr125004-0.417-0.1603Yes
162Uqcr1025058-0.420-0.1521Yes
163Hsd17b1025226-0.427-0.1479Yes
164Ndufa425252-0.430-0.1385Yes
165Slc25a425370-0.435-0.1323Yes
166Slc25a525566-0.451-0.1285Yes
167Timm1025592-0.453-0.1185Yes
168Etfb25604-0.454-0.1080Yes
169Cox5a25869-0.476-0.1062Yes
170Cox6b125903-0.479-0.0958Yes
171Cox5b25935-0.482-0.0853Yes
172Ndufb825953-0.484-0.0743Yes
173Timm5025960-0.484-0.0629Yes
174Ldha26283-0.523-0.0620Yes
175Ldhb26295-0.524-0.0498Yes
176Ndufc226394-0.537-0.0404Yes
177Uqcrb26541-0.562-0.0322Yes
178Cox6a126639-0.576-0.0219Yes
179Atp6v1f26651-0.578-0.0084Yes
180Ndufa326656-0.5780.0054Yes
181Cyc126668-0.5800.0190Yes
182Mrpl3426915-0.6240.0251Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION