Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group1_versus_Group3.MEP.ery_Pheno.cls #Group1_versus_Group3_repos
Phenotype	MEP.ery_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	-0.33274028
Normalized Enrichment Score (NES)	-1.317368
Nominal p-value	0.11001965
FDR q-value	0.69943255
FWER p-Value	0.824

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Fos	0	1.462	0.0343	No
2	Has1	512	0.588	0.0295	No
3	Jun	529	0.586	0.0426	No
4	Gck	582	0.568	0.0541	No
5	Phkg1	725	0.540	0.0616	No
6	Map3k1	929	0.506	0.0661	No
7	Errfi1	1710	0.413	0.0473	No
8	Ppp1r15a	1842	0.399	0.0519	No
9	Dusp1	1947	0.391	0.0573	No
10	Gapdhs	2482	0.356	0.0462	No
11	Hdlbp	2614	0.344	0.0495	No
12	Tgm2	2809	0.335	0.0503	No
13	Rragd	2978	0.325	0.0518	No
14	Noct	3493	0.295	0.0400	No
15	Ero1a	3705	0.284	0.0389	No
16	Gpc4	4171	0.265	0.0282	No
17	Ampd3	4340	0.257	0.0281	No
18	Ids	4629	0.246	0.0234	No
19	Rbpj	4775	0.238	0.0237	No
20	Stc1	4970	0.229	0.0220	No
21	Eno1b	5287	0.222	0.0157	No
22	Myh9	5490	0.213	0.0133	No
23	Foxo3	5643	0.208	0.0126	No
24	Plin2	5825	0.201	0.0108	No
25	Pgk1	5949	0.197	0.0109	No
26	Egfr	5985	0.195	0.0142	No
27	Kdelr3	6524	0.175	-0.0013	No
28	Gbe1	6756	0.168	-0.0058	No
29	Aldob	7132	0.155	-0.0158	No
30	Cdkn1b	7552	0.148	-0.0276	No
31	Kdm3a	7555	0.148	-0.0242	No
32	Pkp1	7625	0.146	-0.0233	No
33	Sdc2	7842	0.139	-0.0280	No
34	Sap30	8398	0.123	-0.0453	No
35	Vhl	8519	0.119	-0.0469	No
36	Ppfia4	8785	0.110	-0.0540	No
37	Klhl24	8823	0.109	-0.0528	No
38	Pim1	8838	0.109	-0.0507	No
39	P4ha1	9147	0.100	-0.0596	No
40	Hs3st1	9177	0.099	-0.0583	No
41	Maff	9407	0.092	-0.0645	No
42	Eno2	9826	0.080	-0.0779	No
43	Ddit4	9901	0.078	-0.0787	No
44	Pnrc1	9911	0.077	-0.0773	No
45	Csrp2	9936	0.077	-0.0763	No
46	Casp6	10119	0.072	-0.0813	No
47	Xpnpep1	10343	0.065	-0.0879	No
48	Ext1	10377	0.064	-0.0876	No
49	Rora	10399	0.063	-0.0868	No
50	Srpx	10699	0.055	-0.0965	No
51	Btg1	10705	0.055	-0.0953	No
52	Selenbp1	10725	0.054	-0.0948	No
53	Mxi1	10828	0.051	-0.0973	No
54	Cavin1	10904	0.049	-0.0989	No
55	P4ha2	11153	0.042	-0.1069	No
56	Tnfaip3	11571	0.030	-0.1214	No
57	Nedd4l	11617	0.029	-0.1224	No
58	Pfkl	11762	0.026	-0.1270	No
59	Zfp292	11775	0.026	-0.1268	No
60	Pdk1	12006	0.021	-0.1347	No
61	Cdkn1c	12202	0.015	-0.1415	No
62	Cavin3	12247	0.014	-0.1428	No
63	Irs2	12396	0.009	-0.1479	No
64	Cav1	12431	0.008	-0.1490	No
65	Efna3	12801	0.000	-0.1624	No
66	Ankzf1	13250	-0.003	-0.1787	No
67	Hk1	13492	-0.009	-0.1873	No
68	Stbd1	13493	-0.009	-0.1870	No
69	Hmox1	13804	-0.018	-0.1979	No
70	Pklr	13852	-0.020	-0.1992	No
71	Ugp2	13943	-0.022	-0.2019	No
72	Bnip3l	14114	-0.027	-0.2075	No
73	Tiparp	14192	-0.029	-0.2096	No
74	Ier3	14216	-0.030	-0.2097	No
75	Sdc3	14263	-0.032	-0.2107	No
76	Tmem45a	14281	-0.032	-0.2105	No
77	Tgfbi	14662	-0.043	-0.2234	No
78	Hspa5	14676	-0.043	-0.2228	No
79	Ndrg1	14697	-0.044	-0.2225	No
80	Slc2a3	14738	-0.045	-0.2229	No
81	Ddit3	14777	-0.046	-0.2232	No
82	Ldhc	15056	-0.054	-0.2321	No
83	Cxcr4	15179	-0.058	-0.2352	No
84	Tpst2	15236	-0.060	-0.2358	No
85	Jmjd6	15290	-0.062	-0.2363	No
86	Isg20	15406	-0.065	-0.2390	No
87	Wsb1	15632	-0.072	-0.2455	No
88	Slc2a5	15995	-0.082	-0.2567	No
89	Adora2b	16134	-0.085	-0.2598	No
90	Ets1	16392	-0.092	-0.2670	No
91	Fam162a	16418	-0.093	-0.2657	No
92	B4galnt2	16460	-0.094	-0.2650	No
93	Scarb1	16593	-0.099	-0.2675	No
94	Ndst2	16621	-0.100	-0.2661	No
95	Atp7a	16841	-0.106	-0.2716	No
96	Pam	17053	-0.113	-0.2767	No
97	Eno3	17125	-0.116	-0.2765	No
98	Large1	17355	-0.120	-0.2821	No
99	Nr3c1	17515	-0.125	-0.2849	No
100	Vegfa	17668	-0.130	-0.2874	No
101	Tpd52	17684	-0.131	-0.2849	No
102	Stc2	17784	-0.134	-0.2854	No
103	Pygm	17915	-0.138	-0.2869	No
104	Tktl1	18014	-0.140	-0.2871	No
105	Pdk3	18237	-0.146	-0.2918	No
106	Tes	18569	-0.156	-0.3002	No
107	Prkca	18791	-0.164	-0.3044	No
108	Ccng2	18829	-0.165	-0.3019	No
109	Gpi1	19155	-0.175	-0.3096	No
110	Akap12	19238	-0.179	-0.3084	No
111	Ndst1	19573	-0.191	-0.3161	No
112	Pgm1	19673	-0.195	-0.3152	No
113	Nagk	20156	-0.211	-0.3278	Yes
114	Gcnt2	20197	-0.213	-0.3242	Yes
115	Angptl4	20262	-0.215	-0.3215	Yes
116	Serpine1	20402	-0.216	-0.3215	Yes
117	Atf3	20504	-0.220	-0.3200	Yes
118	Ilvbl	20522	-0.221	-0.3155	Yes
119	Gpc1	20859	-0.231	-0.3223	Yes
120	Slc2a1	21039	-0.237	-0.3233	Yes
121	Pgam2	21100	-0.239	-0.3198	Yes
122	Lxn	21224	-0.244	-0.3186	Yes
123	Col5a1	21286	-0.247	-0.3150	Yes
124	Dtna	21293	-0.247	-0.3095	Yes
125	Sdc4	21297	-0.248	-0.3038	Yes
126	F3	21393	-0.252	-0.3013	Yes
127	Tpi1	21416	-0.252	-0.2962	Yes
128	Hk2	21430	-0.253	-0.2907	Yes
129	Slc37a4	21500	-0.256	-0.2872	Yes
130	Ak4	21755	-0.264	-0.2903	Yes
131	Slc6a6	21905	-0.267	-0.2895	Yes
132	Pgm2	21951	-0.269	-0.2848	Yes
133	Gys1	21960	-0.269	-0.2788	Yes
134	Aldoa	22042	-0.272	-0.2753	Yes
135	Aldoc	22168	-0.278	-0.2734	Yes
136	Gaa	22278	-0.283	-0.2707	Yes
137	Hexa	22464	-0.291	-0.2706	Yes
138	Ccn5	22500	-0.292	-0.2650	Yes
139	Zfp36	22920	-0.307	-0.2731	Yes
140	Pfkfb3	22991	-0.311	-0.2683	Yes
141	B3galt6	23024	-0.313	-0.2622	Yes
142	Klf7	23382	-0.328	-0.2675	Yes
143	Fbp1	23524	-0.335	-0.2648	Yes
144	Plac8	23619	-0.339	-0.2602	Yes
145	Fosl2	23621	-0.339	-0.2523	Yes
146	Bgn	23666	-0.340	-0.2459	Yes
147	Glrx	23691	-0.342	-0.2388	Yes
148	Plaur	23748	-0.345	-0.2327	Yes
149	Bhlhe40	23792	-0.347	-0.2262	Yes
150	Car12	23803	-0.348	-0.2184	Yes
151	Klf6	23815	-0.348	-0.2106	Yes
152	Nfil3	24005	-0.360	-0.2090	Yes
153	Mt1	24727	-0.402	-0.2259	Yes
154	Pdgfb	24847	-0.408	-0.2206	Yes
155	Bcl2	25054	-0.420	-0.2183	Yes
156	Pck1	25065	-0.420	-0.2088	Yes
157	Slc25a1	25254	-0.430	-0.2056	Yes
158	Siah2	25393	-0.437	-0.2003	Yes
159	Pfkp	25423	-0.440	-0.1911	Yes
160	Grhpr	25552	-0.450	-0.1852	Yes
161	Vldlr	25562	-0.451	-0.1749	Yes
162	Gpc3	25845	-0.474	-0.1741	Yes
163	Cp	25848	-0.474	-0.1630	Yes
164	Kif5a	26112	-0.502	-0.1608	Yes
165	Mif	26248	-0.518	-0.1536	Yes
166	Ldha	26283	-0.523	-0.1426	Yes
167	Sult2b1	26324	-0.528	-0.1316	Yes
168	Il6	26547	-0.562	-0.1265	Yes
169	Prdx5	26567	-0.565	-0.1140	Yes
170	Tgfb3	26670	-0.581	-0.1040	Yes
171	Cited2	26841	-0.611	-0.0959	Yes
172	S100a4	27027	-0.644	-0.0875	Yes
173	Cdkn1a	27165	-0.686	-0.0764	Yes
174	Anxa2	27169	-0.688	-0.0604	Yes
175	Galk1	27259	-0.717	-0.0468	Yes
176	Chst3	27290	-0.729	-0.0308	Yes
177	Dcn	27445	-0.833	-0.0169	Yes
178	Ppargc1a	27546	-0.960	0.0020	Yes