Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group1_versus_Group3.MEP.ery_Pheno.cls #Group1_versus_Group3_repos
Phenotype	MEP.ery_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.31250694
Normalized Enrichment Score (NES)	-1.3318461
Nominal p-value	0.04637097
FDR q-value	0.7657244
FWER p-Value	0.8

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hspa1a	33	1.025	0.0228	No
2	Cd36	46	0.974	0.0452	No
3	Kcnip2	245	0.710	0.0546	No
4	Brpf3	428	0.618	0.0625	No
5	Cd40lg	513	0.588	0.0732	No
6	C1s1	560	0.573	0.0850	No
7	L3mbtl4	794	0.525	0.0888	No
8	Cdk5r1	1251	0.460	0.0829	No
9	Zfpm2	1581	0.427	0.0809	No
10	C1qa	1966	0.389	0.0761	No
11	Gmfb	2539	0.351	0.0634	No
12	Clu	2552	0.350	0.0712	No
13	Irf7	2835	0.334	0.0687	No
14	F5	3409	0.300	0.0549	No
15	Serpinc1	3513	0.294	0.0580	No
16	C1qc	3522	0.294	0.0646	No
17	Tmprss6	3666	0.287	0.0661	No
18	Pla2g7	3862	0.280	0.0656	No
19	F7	4263	0.261	0.0571	No
20	Prdm4	4280	0.261	0.0626	No
21	F2	4325	0.258	0.0671	No
22	Hnf4a	4347	0.257	0.0723	No
23	Jak2	4867	0.234	0.0589	No
24	Ehd1	5228	0.225	0.0510	No
25	Gngt2	5277	0.222	0.0545	No
26	Rnf4	5625	0.209	0.0467	No
27	Raf1	6294	0.183	0.0267	No
28	Ltf	6350	0.181	0.0289	No
29	Lck	6387	0.180	0.0318	No
30	F10	6419	0.179	0.0349	No
31	Timp1	6575	0.174	0.0333	No
32	Usp15	6595	0.173	0.0367	No
33	Fcer1g	6604	0.173	0.0404	No
34	Vcpip1	6608	0.173	0.0444	No
35	Fdx1	6638	0.172	0.0474	No
36	Dock4	6736	0.168	0.0478	No
37	Ctso	6851	0.164	0.0475	No
38	Prep	7424	0.152	0.0302	No
39	Gnai3	7635	0.145	0.0259	No
40	Timp2	7732	0.142	0.0257	No
41	F8	7873	0.138	0.0239	No
42	Mmp15	7987	0.135	0.0229	No
43	Kif2a	8803	0.110	-0.0042	No
44	Pim1	8838	0.109	-0.0029	No
45	Pik3ca	8872	0.108	-0.0016	No
46	Zeb1	9047	0.102	-0.0055	No
47	Me1	9195	0.099	-0.0086	No
48	Ppp2cb	9217	0.098	-0.0070	No
49	Phex	9371	0.093	-0.0104	No
50	Maff	9407	0.092	-0.0095	No
51	Usp14	9438	0.091	-0.0085	No
52	Usp8	9935	0.077	-0.0248	No
53	Usp16	9938	0.077	-0.0230	No
54	Rbsn	9997	0.075	-0.0234	No
55	Gnai2	10114	0.072	-0.0259	No
56	Xpnpep1	10343	0.065	-0.0327	No
57	Plg	10352	0.065	-0.0315	No
58	Pik3cg	10388	0.064	-0.0313	No
59	Psen1	10805	0.052	-0.0452	No
60	Cebpb	10827	0.051	-0.0448	No
61	Cd46	11358	0.036	-0.0633	No
62	Serpinb2	11376	0.035	-0.0631	No
63	Adam9	11430	0.034	-0.0642	No
64	Cblb	11542	0.031	-0.0675	No
65	Tnfaip3	11571	0.030	-0.0678	No
66	Actn2	11903	0.023	-0.0793	No
67	Gzmb	12259	0.014	-0.0920	No
68	Irf2	12284	0.012	-0.0926	No
69	Gp9	12382	0.010	-0.0959	No
70	Src	13421	-0.007	-0.1335	No
71	Akap10	13569	-0.011	-0.1386	No
72	Cfb	13854	-0.020	-0.1485	No
73	Lcp2	13928	-0.022	-0.1507	No
74	Klkb1	14094	-0.027	-0.1560	No
75	Lta4h	14125	-0.028	-0.1565	No
76	Cpq	14160	-0.028	-0.1571	No
77	Pik3r5	14171	-0.029	-0.1568	No
78	Dusp6	14308	-0.033	-0.1609	No
79	Pclo	14432	-0.036	-0.1646	No
80	Ctsb	14433	-0.036	-0.1637	No
81	Cfh	14439	-0.036	-0.1631	No
82	Prcp	14500	-0.038	-0.1643	No
83	Pdp1	14591	-0.041	-0.1667	No
84	C3	14642	-0.042	-0.1675	No
85	Hspa5	14676	-0.043	-0.1677	No
86	S100a13	14693	-0.044	-0.1672	No
87	Rasgrp1	14839	-0.048	-0.1714	No
88	Cdh13	14986	-0.052	-0.1755	No
89	Dock9	15080	-0.055	-0.1776	No
90	Notch4	15190	-0.058	-0.1802	No
91	Lap3	15224	-0.060	-0.1800	No
92	Gng2	15305	-0.062	-0.1815	No
93	Scg3	15455	-0.066	-0.1853	No
94	Dyrk2	15588	-0.070	-0.1885	No
95	Stx4a	15634	-0.072	-0.1885	No
96	Gpd2	15647	-0.072	-0.1872	No
97	Dusp5	15915	-0.080	-0.1950	No
98	Car2	16179	-0.086	-0.2026	No
99	Calm3	16329	-0.090	-0.2059	No
100	Prkcd	16742	-0.103	-0.2185	No
101	Grb2	16829	-0.106	-0.2192	No
102	Dpp4	16902	-0.109	-0.2193	No
103	Pcsk9	17136	-0.116	-0.2250	No
104	Lamp2	17762	-0.133	-0.2447	No
105	Sh2b3	17829	-0.135	-0.2439	No
106	Ctsd	17860	-0.136	-0.2418	No
107	Casp9	17899	-0.137	-0.2400	No
108	Pla2g4a	18153	-0.143	-0.2459	No
109	Sirt6	18259	-0.147	-0.2463	No
110	Irf1	18424	-0.151	-0.2487	No
111	Msrb1	18443	-0.152	-0.2458	No
112	Casp3	18458	-0.152	-0.2428	No
113	Dgkh	18645	-0.158	-0.2458	No
114	Lgals3	18736	-0.161	-0.2453	No
115	Plek	18755	-0.162	-0.2422	No
116	Rabif	19122	-0.174	-0.2514	No
117	Olr1	19545	-0.190	-0.2624	No
118	Ppp4c	20049	-0.207	-0.2759	No
119	Ctsl	20384	-0.216	-0.2830	No
120	Serpine1	20402	-0.216	-0.2785	No
121	Cpm	20435	-0.217	-0.2746	No
122	Fn1	20481	-0.219	-0.2711	No
123	Casp7	20674	-0.227	-0.2728	No
124	Was	20975	-0.234	-0.2782	No
125	Lipa	21202	-0.243	-0.2808	No
126	Dock10	21229	-0.244	-0.2760	No
127	F3	21393	-0.252	-0.2760	No
128	S100a9	21995	-0.271	-0.2916	No
129	Plat	22481	-0.292	-0.3024	No
130	Rce1	22725	-0.300	-0.3043	No
131	Lgmn	22807	-0.301	-0.3001	No
132	Mmp14	23147	-0.317	-0.3051	Yes
133	Calm1	23269	-0.324	-0.3019	Yes
134	C9	23389	-0.329	-0.2985	Yes
135	Dgkg	23428	-0.331	-0.2921	Yes
136	Casp4	23728	-0.344	-0.2950	Yes
137	Plaur	23748	-0.345	-0.2876	Yes
138	Cr2	23844	-0.350	-0.2828	Yes
139	Gnb4	23875	-0.353	-0.2757	Yes
140	Pfn1	23913	-0.355	-0.2687	Yes
141	Atox1	24009	-0.360	-0.2637	Yes
142	Kcnip3	24070	-0.364	-0.2574	Yes
143	Gp1ba	24100	-0.366	-0.2498	Yes
144	Col4a2	24159	-0.370	-0.2433	Yes
145	Gata3	24259	-0.375	-0.2381	Yes
146	Spock2	24276	-0.377	-0.2298	Yes
147	Rhog	24361	-0.382	-0.2239	Yes
148	Itgam	24367	-0.383	-0.2151	Yes
149	Casp1	24681	-0.398	-0.2172	Yes
150	Lyn	24767	-0.405	-0.2108	Yes
151	Pdgfb	24847	-0.408	-0.2041	Yes
152	Ctsh	24890	-0.409	-0.1961	Yes
153	Ccl5	24921	-0.412	-0.1875	Yes
154	Mmp13	25282	-0.432	-0.1905	Yes
155	Anxa5	25386	-0.437	-0.1840	Yes
156	Serping1	25426	-0.440	-0.1751	Yes
157	Plscr1	25474	-0.444	-0.1664	Yes
158	Fyn	25549	-0.450	-0.1586	Yes
159	Cda	25655	-0.459	-0.1516	Yes
160	Cp	25848	-0.474	-0.1475	Yes
161	Gca	25898	-0.479	-0.1381	Yes
162	Lrp1	26075	-0.497	-0.1329	Yes
163	Gnb2	26174	-0.508	-0.1245	Yes
164	Prss36	26272	-0.521	-0.1158	Yes
165	Ctsc	26298	-0.525	-0.1045	Yes
166	Csrp1	26311	-0.526	-0.0926	Yes
167	Fcnb	26505	-0.556	-0.0866	Yes
168	Il6	26547	-0.562	-0.0749	Yes
169	Ctss	26872	-0.617	-0.0722	Yes
170	Mmp8	27067	-0.660	-0.0638	Yes
171	Gzmk	27100	-0.667	-0.0493	Yes
172	Psmb9	27108	-0.670	-0.0339	Yes
173	Kynu	27138	-0.678	-0.0190	Yes
174	C2	27280	-0.724	-0.0072	Yes
175	Tfpi2	27417	-0.805	0.0067	Yes