Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	MEP.MEP.ery_Pheno.cls #Group1_versus_Group3.MEP.ery_Pheno.cls #Group1_versus_Group3_repos
Phenotype	MEP.ery_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.38563356
Normalized Enrichment Score (NES)	-1.3503791
Nominal p-value	0.13412228
FDR q-value	1.0
FWER p-Value	0.772

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Rpl3l	199	0.739	0.0092	No
2	Cd40lg	513	0.588	0.0108	No
3	Nlrp3	963	0.500	0.0056	No
4	Fgr	1380	0.443	0.0003	No
5	Mmp9	1390	0.441	0.0097	No
6	Apbb1	2065	0.381	-0.0063	No
7	Il2rb	2203	0.373	-0.0031	No
8	Tlr3	2222	0.371	0.0045	No
9	Ache	2322	0.364	0.0090	No
10	Irf7	2835	0.334	-0.0022	No
11	Prf1	2960	0.326	0.0005	No
12	Fcgr2b	3181	0.313	-0.0006	No
13	Eif3a	3373	0.302	-0.0008	No
14	Brca1	3900	0.278	-0.0138	No
15	Thy1	4225	0.263	-0.0198	No
16	Nos2	4288	0.260	-0.0162	No
17	F2	4325	0.258	-0.0118	No
18	Ube2n	4799	0.237	-0.0238	No
19	Jak2	4867	0.234	-0.0210	No
20	Mrpl3	5283	0.222	-0.0312	No
21	Map3k7	5431	0.215	-0.0318	No
22	Lif	5463	0.214	-0.0281	No
23	Il2ra	5703	0.206	-0.0323	No
24	Egfr	5985	0.195	-0.0382	No
25	Cd4	6008	0.194	-0.0347	No
26	Lck	6387	0.180	-0.0444	No
27	Traf2	6455	0.178	-0.0429	No
28	Timp1	6575	0.174	-0.0434	No
29	Tgfb2	6689	0.170	-0.0437	No
30	Prkcg	6701	0.170	-0.0403	No
31	Stat1	7046	0.158	-0.0494	No
32	Eif4g3	7349	0.154	-0.0570	No
33	Abce1	7384	0.153	-0.0548	No
34	Gcnt1	7870	0.138	-0.0694	No
35	Ccnd3	8048	0.133	-0.0729	No
36	Dyrk3	8310	0.126	-0.0796	No
37	Hcls1	8372	0.124	-0.0791	No
38	Abi1	8504	0.119	-0.0812	No
39	Nck1	8690	0.113	-0.0854	No
40	Cd247	8969	0.105	-0.0932	No
41	Tlr6	8976	0.105	-0.0911	No
42	Tlr2	9054	0.102	-0.0917	No
43	Il4ra	9148	0.100	-0.0928	No
44	Tap2	9345	0.094	-0.0979	No
45	Il4	9392	0.093	-0.0975	No
46	Il2	9629	0.085	-0.1042	No
47	Icosl	10038	0.075	-0.1174	No
48	Ncr1	10147	0.071	-0.1198	No
49	Galnt1	10454	0.062	-0.1296	No
50	Eif3j1	10562	0.059	-0.1321	No
51	Akt1	10736	0.054	-0.1372	No
52	Il7	10901	0.049	-0.1421	No
53	F2r	10975	0.047	-0.1438	No
54	H2-DMb2	11111	0.043	-0.1477	No
55	Bcat1	11125	0.043	-0.1473	No
56	Il1b	11203	0.040	-0.1492	No
57	Klrd1	11246	0.039	-0.1498	No
58	Itk	11601	0.030	-0.1621	No
59	Cd79a	11911	0.023	-0.1728	No
60	Glmn	11938	0.022	-0.1733	No
61	H2-Ob	12052	0.019	-0.1770	No
62	Gzmb	12259	0.014	-0.1842	No
63	Ikbkb	12648	0.003	-0.1982	No
64	Tapbp	12661	0.003	-0.1986	No
65	Wars1	13277	-0.004	-0.2209	No
66	Ripk2	13655	-0.014	-0.2344	No
67	Ccr1	13755	-0.017	-0.2376	No
68	Lcp2	13928	-0.022	-0.2434	No
69	Hif1a	14453	-0.037	-0.2617	No
70	Il11	14473	-0.038	-0.2615	No
71	Acvr2a	14488	-0.038	-0.2612	No
72	Ptpn6	15173	-0.058	-0.2848	No
73	Flna	15182	-0.058	-0.2838	No
74	Cd47	15659	-0.073	-0.2995	No
75	Eif3d	15944	-0.081	-0.3081	No
76	Ltb	15967	-0.081	-0.3071	No
77	Socs5	16205	-0.087	-0.3138	No
78	Ets1	16392	-0.092	-0.3185	No
79	Cd40	16564	-0.098	-0.3226	No
80	Ccr5	16669	-0.101	-0.3241	No
81	Csf1	16754	-0.104	-0.3249	No
82	Bcl3	16950	-0.110	-0.3295	No
83	Cd86	16988	-0.111	-0.3284	No
84	Cd2	17237	-0.119	-0.3348	No
85	Stat4	17506	-0.125	-0.3418	No
86	Tpd52	17684	-0.131	-0.3454	No
87	Ptprc	17698	-0.131	-0.3429	No
88	Mtif2	17837	-0.136	-0.3449	No
89	Tlr1	17840	-0.136	-0.3420	No
90	Crtam	17960	-0.139	-0.3432	No
91	Irf4	18115	-0.142	-0.3457	No
92	Npm1	18152	-0.143	-0.3438	No
93	Tap1	18352	-0.149	-0.3478	No
94	Pf4	18549	-0.155	-0.3515	No
95	Fasl	18589	-0.157	-0.3494	No
96	H2-Oa	18892	-0.167	-0.3567	No
97	H2-DMa	19058	-0.172	-0.3589	No
98	Csk	19111	-0.174	-0.3569	No
99	Hdac9	19308	-0.181	-0.3600	No
100	Il16	19446	-0.186	-0.3609	No
101	Cd1d2	19779	-0.199	-0.3686	No
102	Il15	19786	-0.199	-0.3644	No
103	Il27ra	19890	-0.203	-0.3636	No
104	Degs1	20076	-0.208	-0.3657	No
105	Rps3a1	20120	-0.210	-0.3626	No
106	Il12a	20150	-0.211	-0.3590	No
107	Ube2d1	20188	-0.213	-0.3556	No
108	Ereg	20293	-0.216	-0.3546	No
109	Il12rb1	20445	-0.218	-0.3553	No
110	Il10	20865	-0.231	-0.3654	No
111	Was	20975	-0.234	-0.3642	No
112	Itgal	21006	-0.236	-0.3600	No
113	Map4k1	21156	-0.242	-0.3601	No
114	H2-Aa	21304	-0.248	-0.3599	No
115	Ly75	21463	-0.255	-0.3600	No
116	Itgb2	22167	-0.278	-0.3794	Yes
117	Rpl9	22290	-0.283	-0.3776	Yes
118	Igsf6	22354	-0.286	-0.3735	Yes
119	Socs1	22513	-0.293	-0.3728	Yes
120	Ifngr1	22541	-0.294	-0.3673	Yes
121	Ccr2	22554	-0.295	-0.3611	Yes
122	Cfp	22800	-0.301	-0.3634	Yes
123	Il18	23169	-0.319	-0.3697	Yes
124	Ifnar2	23263	-0.323	-0.3659	Yes
125	Bcl10	23362	-0.327	-0.3622	Yes
126	Rps9	23442	-0.332	-0.3577	Yes
127	Trat1	23782	-0.346	-0.3624	Yes
128	Eif5a	23810	-0.348	-0.3556	Yes
129	Cd3d	23887	-0.353	-0.3505	Yes
130	Ccnd2	24017	-0.361	-0.3472	Yes
131	Nme1	24330	-0.380	-0.3501	Yes
132	Stab1	24348	-0.381	-0.3423	Yes
133	Prkcb	24682	-0.398	-0.3456	Yes
134	Lyn	24767	-0.405	-0.3396	Yes
135	Icam1	24835	-0.408	-0.3330	Yes
136	Ccl5	24921	-0.412	-0.3270	Yes
137	Psmb10	25022	-0.418	-0.3213	Yes
138	Ifngr2	25182	-0.424	-0.3177	Yes
139	Elf4	25405	-0.439	-0.3160	Yes
140	Tgfb1	25418	-0.440	-0.3067	Yes
141	Cd80	25455	-0.443	-0.2982	Yes
142	St8sia4	25690	-0.463	-0.2964	Yes
143	Gpr65	25705	-0.464	-0.2866	Yes
144	Cd3e	25757	-0.468	-0.2781	Yes
145	Cd3g	25787	-0.470	-0.2687	Yes
146	Rpl39-ps	25976	-0.486	-0.2647	Yes
147	Tnf	25999	-0.488	-0.2547	Yes
148	Il2rg	26230	-0.515	-0.2516	Yes
149	Irf8	26448	-0.546	-0.2473	Yes
150	B2m	26522	-0.558	-0.2376	Yes
151	Il6	26547	-0.562	-0.2260	Yes
152	Elane	26669	-0.580	-0.2175	Yes
153	Cd96	26678	-0.583	-0.2048	Yes
154	Srgn	26762	-0.600	-0.1945	Yes
155	Cdkn2a	26810	-0.607	-0.1827	Yes
156	Ly86	26849	-0.613	-0.1705	Yes
157	Ctss	26872	-0.617	-0.1576	Yes
158	Fas	26888	-0.621	-0.1443	Yes
159	Capg	26981	-0.634	-0.1336	Yes
160	Cd74	26997	-0.637	-0.1200	Yes
161	Il18rap	27034	-0.647	-0.1069	Yes
162	Inhba	27090	-0.665	-0.0941	Yes
163	Cd7	27152	-0.685	-0.0811	Yes
164	C2	27280	-0.724	-0.0697	Yes
165	Spi1	27459	-0.845	-0.0573	Yes
166	Zap70	27483	-0.865	-0.0390	Yes
167	Cd28	27485	-0.865	-0.0198	Yes
168	Ncf4	27575	-1.080	0.0010	Yes